Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12o08f
(601 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406 32 0.31
01_06_1664 - 38984545-38984615,38984706-38984802,38985362-389855... 29 2.8
01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142... 29 2.8
08_02_0468 - 17505905-17506002,17506295-17506424,17506662-175067... 29 3.8
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 29 3.8
07_01_0597 + 4438858-4439847,4439936-4440067,4440397-4441176,444... 28 6.6
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 28 6.6
02_02_0163 + 7320615-7321673 28 6.6
12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316... 27 8.7
11_04_0151 + 14135390-14135630,14135723-14136132 27 8.7
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 27 8.7
11_03_0063 + 9515666-9516656,9517503-9518599 27 8.7
10_06_0007 + 9510385-9510535,9510860-9511433,9511553-9511565 27 8.7
10_05_0085 - 9005539-9005922,9006207-9006463,9006707-9006883,900... 27 8.7
09_04_0086 + 14445665-14446683,14448669-14448915 27 8.7
09_04_0085 + 14441123-14443507,14443731-14443787 27 8.7
08_02_0007 + 11208170-11210325,11210367-11210403 27 8.7
08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391 27 8.7
08_02_0003 + 11180421-11180757,11180773-11185715 27 8.7
08_02_0002 + 11173365-11173512,11173528-11178470 27 8.7
08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651 27 8.7
07_01_0376 + 2815419-2815755,2815912-2817659 27 8.7
06_03_0452 + 20931484-20933872,20933950-20934074 27 8.7
06_01_0223 - 1709897-1709912,1710188-1712520 27 8.7
05_04_0185 - 18857229-18857638,18858347-18858424,18858758-18859931 27 8.7
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 27 8.7
02_02_0337 - 9096588-9096603,9096879-9097927 27 8.7
01_01_0100 - 755894-756662,757086-757598,758718-761050 27 8.7
>12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406
Length = 351
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +3
Query: 153 RETARSTRAWGPYCRYTAARPKSWSDALRARTTTAACSPTNCWRRSRNWPTLDSTRILLR 332
R A R GP A +SW+ + A SP C+RR + W +L S+ R
Sbjct: 237 RPHANVRRTNGPRSSPAAMAMESWARSASDAAADAGASP-GCFRRIKIWSSLSSSSSCSR 295
Query: 333 RSS 341
RS+
Sbjct: 296 RSA 298
>01_06_1664 -
38984545-38984615,38984706-38984802,38985362-38985523,
38985736-38985825,38986125-38986226,38986373-38986446,
38986587-38986615,38986766-38986989
Length = 282
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +2
Query: 89 TVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCC--PPEELERRAESTHHYCGV 262
T L+ +K V M IH NGK+YA I I C ++ + S
Sbjct: 162 TALDLYFKYNVTEMLASGGIHVSNGKQYALTDVIDAIKCAFGASPQIVCKKGSVEELRLC 221
Query: 263 FTDELLAPLEELAYVRLDENTAEKVFINR 349
F D+ L PL+ L +EN ++K + R
Sbjct: 222 F-DKDLKPLDCLTTTATNENVSKKKYCPR 249
>01_01_0167 +
1422344-1424260,1424338-1424472,1424568-1424990,
1425183-1425252,1425356-1425495,1425620-1425679,
1425776-1425931,1426272-1426541
Length = 1056
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 516 PPSRVKADTLRAHKTGRWLNRLQAAMR 596
P RVKA +KT RWLN L A R
Sbjct: 244 PGQRVKAVNSSVYKTSRWLNGLWKASR 270
>08_02_0468 -
17505905-17506002,17506295-17506424,17506662-17506778,
17506881-17506959,17507546-17507654,17507857-17507969,
17510510-17510570,17511562-17511742,17512903-17512960,
17514292-17514497,17514582-17514671,17514752-17514813,
17514911-17514979,17515330-17515334,17516282-17516454
Length = 516
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 445 RAGDVPVRRLEGRRAPPLRQVPVA*-HYQYALGSVYEDLLSSILVESNVGQFLERR 281
+A +P+R R P ++ A HY Y+L S+YE +L I+ S ++RR
Sbjct: 157 KAATMPIRSRGVRWNKPRYELTAALFHYSYSLQSLYESILQEIM-NSAPSNSIQRR 211
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = -2
Query: 198 IGSMDPTLAYFLPFLSCISAGILIDSTMPL*FSFSTVRLDIAVFLENKSEN 46
+G M + +F F +C G+L +S++ F T+R+D+ + + ++N
Sbjct: 524 LGMMRWGVVFFFSFSNCSICGLLYESSVKHIVFFCTIRVDLVLHTFDGNKN 574
>07_01_0597 +
4438858-4439847,4439936-4440067,4440397-4441176,
4441359-4441646,4441710-4441808
Length = 762
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1
Query: 514 DGIVVVFLRHNDGDDAPALVDDGRAGDVPVRRLEGRRAPPLRQVPVA 374
DG V+F+R D D+ V R D P+R RR+ P +PVA
Sbjct: 200 DGDSVIFMRRRDDDELYVGVRRQRTLDKPLRT---RRSRPPTPLPVA 243
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ + ++ ++A EL Y+ L +++
Sbjct: 146 EELKRAGSNPHNFANIVSNIIIAEDPELGYITLQNERLKEI 186
>02_02_0163 + 7320615-7321673
Length = 352
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -1
Query: 598 VRIAACSRFNHLPVLCALKVSAFTLEGGDGIVVVFLRHNDGDDAPALVDDGRA 440
VR C F A ++ TL DG+V V R D+ L +DGR+
Sbjct: 244 VREIQCGEFAVSAQFLAARIPGLTLAVADGLVDVLRRKGFVDEKGFLKNDGRS 296
>12_02_0772 -
23029703-23029715,23029835-23030463,23030637-23031673,
23031830-23032166
Length = 671
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 496 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 536
>11_04_0151 + 14135390-14135630,14135723-14136132
Length = 216
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 483 LWRRKTTTMPSPPSRVKADTLRAHKTG 563
L+ R TTT P PPSR L +TG
Sbjct: 142 LFPRTTTTTPPPPSRTVPHALYHRQTG 168
>11_03_0065 -
9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 401 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 441
>11_03_0063 + 9515666-9516656,9517503-9518599
Length = 695
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 178 EELKRAGSNPHNFANVISNIIIAEDPELCYTTLQNERLKEI 218
>10_06_0007 + 9510385-9510535,9510860-9511433,9511553-9511565
Length = 245
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 70 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 110
>10_05_0085 -
9005539-9005922,9006207-9006463,9006707-9006883,
9007349-9007490,9007814-9007904,9009024-9010942
Length = 989
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 468 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 508
>09_04_0086 + 14445665-14446683,14448669-14448915
Length = 421
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 178 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 218
>09_04_0085 + 14441123-14443507,14443731-14443787
Length = 813
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 606 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 646
>08_02_0007 + 11208170-11210325,11210367-11210403
Length = 730
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 593 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 633
>08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391
Length = 818
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 601 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 641
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 591 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 631
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 528 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 568
>08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651
Length = 642
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 435 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 475
>07_01_0376 + 2815419-2815755,2815912-2817659
Length = 694
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 554 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 594
>06_03_0452 + 20931484-20933872,20933950-20934074
Length = 837
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKVFINR-AKRILIVSSDGH 385
EELER S +H+ G D +A L +L V+L +N+ E + K L+ + + H
Sbjct: 320 EELERLFLSNNHFTGSIPDS-VALLPKLTNVQLFQNSFEGILPQELGKHSLLFNLETH 376
>06_01_0223 - 1709897-1709912,1710188-1712520
Length = 782
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 606 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 646
>05_04_0185 - 18857229-18857638,18858347-18858424,18858758-18859931
Length = 553
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 239 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 279
>04_03_0024 -
9623178-9624001,9624502-9624678,9625144-9625305,
9625520-9626032,9626801-9629153
Length = 1342
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 606 EELKRAGSNLHNFANVISNIIIAEDPELGYTTLQNERLKEI 646
>02_02_0337 - 9096588-9096603,9096879-9097927
Length = 354
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 178 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 218
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 215 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEKV 337
EEL+R + H++ V ++ ++A EL Y L +++
Sbjct: 606 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKEI 646
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,049,033
Number of Sequences: 37544
Number of extensions: 325394
Number of successful extensions: 1177
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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