Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12o08f
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    23   7.5  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    23   7.5  
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    23   7.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   10.0 

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 20  SREVVAAC*FSDLFSKKTAMSKRTVLNENYKGIVES-MSIPAE 145
           S+  VA      L  +  A SK+  +++ YKGIV+  + IP E
Sbjct: 24  SKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKE 66


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 20  SREVVAAC*FSDLFSKKTAMSKRTVLNENYKGIVES-MSIPAE 145
           S+  VA      L  +  A SK+  +++ YKGIV+  + IP E
Sbjct: 24  SKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKE 66


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 20  SREVVAAC*FSDLFSKKTAMSKRTVLNENYKGIVES-MSIPAE 145
           S+  VA      L  +  A SK+  +++ YKGIV+  + IP E
Sbjct: 24  SKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKE 66


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 370 HYQYALGSVYEDLLSSILVESNVG 299
           H +YA  +V++  +S I +  N+G
Sbjct: 721 HVEYACNNVFKAAISLIQIMPNIG 744


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,003
Number of Sequences: 2352
Number of extensions: 11880
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)