Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12m21r
(616 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 28 0.083
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.0
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 4.1
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 5.5
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 7.2
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 7.2
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 7.2
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 9.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 9.6
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 9.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 9.6
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 27.9 bits (59), Expect = 0.083
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 535 PTLGTPLTAVLYRPLARPRQST 600
P +GTP T ++Y+P P Q++
Sbjct: 847 PVIGTPSTGMMYKPFLIPEQTS 868
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.2 bits (50), Expect = 1.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 357 TTPPGPSRIQTGNPVGSATSLSSS 428
TTP PSR Q+ + SA ++S+S
Sbjct: 530 TTPVLPSRFQSHPSIDSANTISNS 553
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 193 RL*EQVLTLQPGWGFLPPLG*KSP 264
R+ + LQPG F PLG + P
Sbjct: 458 RMDRDAVYLQPGMSFGEPLGLRRP 481
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 77 NAVFGKRGNGIYGLRTGSSWPF*KY 3
N V K+G G LR W F KY
Sbjct: 97 NVVTNKKGKGGPLLRPYPDWSFAKY 121
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 7.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 77 NAVFGKRGNGIYGLRTGSSWPF*KY 3
N V K GNG L+ W F KY
Sbjct: 96 NVVSDKTGNGGRLLQPYPDWSFAKY 120
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 433 VTLDDRLVADPTGLPVW 383
+TLDD++ P P+W
Sbjct: 643 MTLDDKVFGFPLDRPMW 659
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 433 VTLDDRLVADPTGLPVW 383
+TLDD++ P P+W
Sbjct: 643 MTLDDKVFGFPLDRPMW 659
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 9.6
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 204 AGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISS 329
AGT+S T+ + + +A+ +T+VGV + ++S
Sbjct: 788 AGTSSITKYTGCELTSESMPLQSALTAAVQTSVGVTEISLAS 829
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +1
Query: 406 LPPACRPALPTTCAPKLKPIKWTRPQLPPPLLM 504
LP R T CA + ++W+ P + L++
Sbjct: 39 LPTKMRELNATACAALYERVEWSGPWILVTLIV 71
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 497 NGGGNWGRVHLIGFSLGAHVVGNA 426
NGGG+ V ++G ++ + V G A
Sbjct: 5 NGGGSSAGVGVVGGTIASVVAGAA 28
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 9.6
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 204 AGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISS 329
AGT+S T+ + + +A+ +T+VGV + ++S
Sbjct: 878 AGTSSITKYTGCELTSESMPLQSALTAAVQTSVGVTEISLAS 919
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,503
Number of Sequences: 438
Number of extensions: 5031
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -