Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12m17f
         (506 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL445686-3|CAI14683.1|  913|Homo sapiens serine/arginine repetit...    32   1.0  
AL445648-2|CAH73089.1|  913|Homo sapiens serine/arginine repetit...    32   1.0  
BC036187-1|AAH36187.1|  904|Homo sapiens serine/arginine repetit...    31   2.3  
AL445686-4|CAI14682.1|  904|Homo sapiens serine/arginine repetit...    31   2.3  
AL445648-3|CAH73090.1|  904|Homo sapiens serine/arginine repetit...    31   2.3  
AY605045-1|AAT35812.1|  199|Homo sapiens HCV F-transactivated pr...    30   4.0  
BC040168-1|AAH40168.1|  479|Homo sapiens v-ets erythroblastosis ...    29   9.3  

>AL445686-3|CAI14683.1|  913|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 913

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = -1

Query: 470 RS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFXRSLQSQPGNRHSQLELRHFL 291
           R+    P H RP+  HR   RS +     RRP    R   R +   P +R S+  +R   
Sbjct: 287 RTRSRSPSHTRPRRRHRS--RSRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRR 344

Query: 290 RSLQNQQGN 264
           RS  +  G+
Sbjct: 345 RSSASLSGS 353


>AL445648-2|CAH73089.1|  913|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 913

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = -1

Query: 470 RS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFXRSLQSQPGNRHSQLELRHFL 291
           R+    P H RP+  HR   RS +     RRP    R   R +   P +R S+  +R   
Sbjct: 287 RTRSRSPSHTRPRRRHRS--RSRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRR 344

Query: 290 RSLQNQQGN 264
           RS  +  G+
Sbjct: 345 RSSASLSGS 353


>BC036187-1|AAH36187.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = -1

Query: 470 RS*QNQPGHRRPQLEHRRCLRSL--QNQPG-HRRPQLEHRGFXRSLQSQPGNRHSQLELR 300
           R+    P H RP+  HR   RS   + +P   RRP    R   R +   P +R S+  +R
Sbjct: 287 RTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVR 346

Query: 299 HFLRSLQNQQGN 264
              RS  +  G+
Sbjct: 347 RRRRSSASLSGS 358


>AL445686-4|CAI14682.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = -1

Query: 470 RS*QNQPGHRRPQLEHRRCLRSL--QNQPG-HRRPQLEHRGFXRSLQSQPGNRHSQLELR 300
           R+    P H RP+  HR   RS   + +P   RRP    R   R +   P +R S+  +R
Sbjct: 287 RTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVR 346

Query: 299 HFLRSLQNQQGN 264
              RS  +  G+
Sbjct: 347 RRRRSSASLSGS 358


>AL445648-3|CAH73090.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = -1

Query: 470 RS*QNQPGHRRPQLEHRRCLRSL--QNQPG-HRRPQLEHRGFXRSLQSQPGNRHSQLELR 300
           R+    P H RP+  HR   RS   + +P   RRP    R   R +   P +R S+  +R
Sbjct: 287 RTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVR 346

Query: 299 HFLRSLQNQQGN 264
              RS  +  G+
Sbjct: 347 RRRRSSASLSGS 358


>AY605045-1|AAT35812.1|  199|Homo sapiens HCV F-transactivated
           protein 1 protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = -1

Query: 290 RSLQNQQGNRRCQREFQCQKSQ---RCLHFRSIQSRPRR 183
           R LQN +GN RCQR+ +   ++    CL    I   PRR
Sbjct: 12  RPLQNVEGNNRCQRKAKNYGNKYFIHCLDLEKITLSPRR 50


>BC040168-1|AAH40168.1|  479|Homo sapiens v-ets erythroblastosis
           virus E26 oncogene homolog (avian) protein.
          Length = 479

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
 Frame = -1

Query: 500 RPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFXRSLQSQPGNR 321
           RP L +    RS     GH  PQ +  +   S   +   +RPQL+         S+  N 
Sbjct: 247 RPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSRLANP 306

Query: 320 HS-QLELRHFLRSLQNQQGNRRC 255
            S Q++L  FL  L +   N  C
Sbjct: 307 GSGQIQLWQFLLELLSDSSNSSC 329


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,199,962
Number of Sequences: 237096
Number of extensions: 1351477
Number of successful extensions: 3637
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3613
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)