Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12l13f
(609 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 9e-31
SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 2e-29
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 102 2e-22
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015) 93 2e-19
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_36410| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 76 2e-14
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 73 1e-13
SB_36064| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 6e-11
SB_31654| Best HMM Match : Pox_F16 (HMM E-Value=5) 58 7e-09
SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22) 49 3e-06
SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09) 43 2e-04
SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96) 32 0.32
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 31 0.55
SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0) 29 2.9
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.9
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 29 3.9
SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10) 29 3.9
SB_4502| Best HMM Match : SpoIIIAC (HMM E-Value=2.8) 29 3.9
SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17) 28 5.1
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 28 6.8
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_54473| Best HMM Match : DLIC (HMM E-Value=0) 27 9.0
SB_14248| Best HMM Match : AAA_5 (HMM E-Value=7.7e-14) 27 9.0
SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17) 27 9.0
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 130 bits (314), Expect = 9e-31
Identities = 61/114 (53%), Positives = 90/114 (78%)
Frame = +1
Query: 268 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 447
++++R GLP+++ +++ ++ ++ +Q ++++GETGSGKTTQI Q+ E ++ GK +
Sbjct: 271 IIQQREGLPIFKLRDELVKAVHQNQVLIVIGETGSGKTTQITQYLAEQGFLTQ-GK---L 326
Query: 448 ACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
ACTQPRRVAAMSVA+RV+EE LGQEVGY+IRFEDC+ P+T +KYMTDG LL
Sbjct: 327 ACTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSPETKIKYMTDGFLL 380
>SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 125 bits (302), Expect = 2e-29
Identities = 59/121 (48%), Positives = 85/121 (70%)
Frame = +1
Query: 247 HSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSG 426
H+ + R++L LP++ + + + Q +++VGETGSGKTTQIPQ+ E +
Sbjct: 44 HTHASSPIQRQKLSLPIFSARKSLITEIRNRQNVIIVGETGSGKTTQIPQYLYE----AK 99
Query: 427 LGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGML 606
+ + +ACTQPRRVAA+S+AQRV+ EM V LG+EVGY++RFED + +T +KYMTDGML
Sbjct: 100 VARNSVIACTQPRRVAAISIAQRVSREMGVQLGEEVGYTVRFEDVTSTKTRIKYMTDGML 159
Query: 607 L 609
L
Sbjct: 160 L 160
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 102 bits (245), Expect = 2e-22
Identities = 49/97 (50%), Positives = 71/97 (73%)
Frame = +1
Query: 268 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 447
L+++R LP++ + + + ++ +Q +++VGETGSGKTTQ+ Q+ E G +
Sbjct: 602 LVQQRQYLPIFAVRQELLSIVRDNQVVIIVGETGSGKTTQLTQYMHE----DGYTNYGMI 657
Query: 448 ACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFED 558
CTQPRRVAAMSVA+RV+EEMD +LG+EVGY+IRFED
Sbjct: 658 GCTQPRRVAAMSVAKRVSEEMDCSLGEEVGYAIRFED 694
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 93.5 bits (222), Expect = 1e-19
Identities = 48/119 (40%), Positives = 77/119 (64%)
Frame = +1
Query: 253 QRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLG 432
+R E+ RL LP+ + M ++ + ++L GETGSGKTTQ+PQ+ E +G
Sbjct: 282 EREPEIQAARLQLPILAEEQAIMEAISENNVVILCGETGSGKTTQVPQFLYE----AGYT 337
Query: 433 KAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
K + T+PRRVAA+S++QRVA+EM + +V Y IR++ + +T++K+MTDG++L
Sbjct: 338 KRGLIGITEPRRVAAVSMSQRVAKEMSMPT-SKVSYQIRYQGNTSDETVIKFMTDGVML 395
>SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015)
Length = 592
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/99 (42%), Positives = 67/99 (67%)
Frame = +1
Query: 259 YHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKA 438
+ +L +R LPV+ YK+ ++ ++ ++ I++ G TG GKTTQ+PQ+ ++ +G G
Sbjct: 297 FKAMLEQRSQLPVFNYKHAILQAVHENRVIIIKGATGCGKTTQVPQFVLDAFLENGQGAE 356
Query: 439 KGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFE 555
+ TQPRR++A+SVA+RVA E ALG VGYS+RF+
Sbjct: 357 CNIVVTQPRRISAVSVAERVAAERSEALGNSVGYSVRFD 395
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/107 (39%), Positives = 64/107 (59%)
Frame = +1
Query: 289 LPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 468
LP+ Y ++ + + + V+ G TGSGKTTQ+PQ+ ++ A + + TQPRR
Sbjct: 74 LPITSYHHEIVNTIENNSACVIFGPTGSGKTTQVPQYILDHYAKQR--RYCNILVTQPRR 131
Query: 469 VAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
+AA+S+A+RV +E D LG +GY I + C T L Y+T G+LL
Sbjct: 132 IAAVSIAKRVCQERDCPLGSLIGYQIGRDKCVSEDTRLAYVTTGVLL 178
>SB_36410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 82.2 bits (194), Expect = 3e-16
Identities = 41/115 (35%), Positives = 68/115 (59%)
Frame = +1
Query: 265 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 444
+L R + LP+ +++ + + HQ +++ G+TG GK+TQ+PQ+ + +G +
Sbjct: 162 KLKRDQTNLPISQFRQQIVDAVKNHQVVIIAGDTGCGKSTQVPQYLLH----AGFTE--- 214
Query: 445 VACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
+ACTQPRR+A +S+A+RV E G EV Y IRFE T + ++T+ LL
Sbjct: 215 IACTQPRRIACISLAKRVGFETLNEYGSEVAYQIRFEGSKTSATRILFLTEACLL 269
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 76.2 bits (179), Expect = 2e-14
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +1
Query: 250 SQRYH-ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSG 426
S R++ E R LP++ K+ ++ + +Q VL+GETGSGK+TQI Q+ + +G
Sbjct: 709 SNRFNREKRRLESALPIYARKSQIIQTIKDNQVTVLIGETGSGKSTQIGQYLYD----AG 764
Query: 427 LGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGY 540
L + CTQPR+VAA S+AQ+V+ EM +G+ VGY
Sbjct: 765 LADKGQIVCTQPRKVAATSLAQQVSREMGQKVGKLVGY 802
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/79 (46%), Positives = 47/79 (59%)
Frame = +1
Query: 373 GKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRF 552
GKTTQIPQ+ ++ G + CTQPRR++AMSVA+RVA E LG VG+ +R
Sbjct: 3 GKTTQIPQFILDSYLEREKGAGCNIICTQPRRISAMSVAERVAAERAEKLGDSVGFKVRL 62
Query: 553 EDCSGPQTLLKYMTDGMLL 609
E T L Y T G+LL
Sbjct: 63 ESKQSSSTRLLYCTTGILL 81
>SB_36064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 64.5 bits (150), Expect = 6e-11
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +1
Query: 478 MSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLL 582
MSVAQRVA+E+DV LGQEVGY+IRFEDC+GP+T L
Sbjct: 1 MSVAQRVADELDVTLGQEVGYTIRFEDCTGPRTAL 35
>SB_31654| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 256
Score = 57.6 bits (133), Expect = 7e-09
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +1
Query: 388 IPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFE 555
+PQ+ ++ +G G + TQPRR++A+SVA+RVA E ALG VGYS+RF+
Sbjct: 1 VPQFVLDAFLENGQGAECNIVVTQPRRISAVSVAERVAAERSEALGNSVGYSVRFD 56
>SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +1
Query: 280 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVE 408
R LPV+ Y+ + + ++ HQ +++ GETGSGKTTQIPQ+ E
Sbjct: 126 RRSLPVYGYREELLEAISEHQVLIIEGETGSGKTTQIPQYLYE 168
>SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22)
Length = 354
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 388 IPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVA-EEMDVALGQEVGYSIRFED-C 561
+ Q+ ++ A G G +ACTQPRR++A+SVA+RVA E + G VGY IR E
Sbjct: 1 VAQFILDDAIQCGNGSLCRIACTQPRRISAISVAERVAIERGEQCGGGSVGYQIRLESRL 60
Query: 562 SGPQTLLKYMTDGML 606
+ + Y T G+L
Sbjct: 61 PRSRGSIIYCTTGVL 75
>SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09)
Length = 185
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +1
Query: 484 VAQRVAEEMDVALGQEVGYSIRFEDCSGPQ 573
VA RVAEE D GQEVGY +RF DC P+
Sbjct: 2 VAIRVAEERDTFAGQEVGYCVRFNDCFDPK 31
>SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96)
Length = 363
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 478 MSVAQRVAEEMDVALGQEVGYSIRFE 555
MSVA+RVA E +GQ GY IR E
Sbjct: 1 MSVAERVAAERGERIGQTAGYQIRLE 26
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 319 MRLLNTHQCIVLVGETGSGKT 381
MR N QCI++ GE+GSGKT
Sbjct: 101 MRDHNKDQCIIITGESGSGKT 121
>SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 316 FMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSG 426
FM+ QC+++ GE+G+GKT AAVSG
Sbjct: 90 FMKRELHDQCVIISGESGAGKTESTKLILQYLAAVSG 126
>SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 280 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKT 381
RLGL Y + + T+ CI G TG GKT
Sbjct: 40 RLGLDSCHYNSTCVNTYGTYHCICNPGYTGDGKT 73
>SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 650
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 319 MRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 447
M+ + CI++ GE+GSGKT AA++ L K K +
Sbjct: 89 MKRRSEDTCIMISGESGSGKTEASKIIMRYIAAITNLSKQKEI 131
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 346 IVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPR 465
+ ++G GSGKTT + + + G K++G C P+
Sbjct: 440 VAVIGAVGSGKTTLLSAILGQVSCTKGKIKSRGTICHVPQ 479
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 328 LNTHQCIVLVGETGSGKTTQI 390
+N + ++LVGETG+GKT+ +
Sbjct: 444 INQQEPVLLVGETGTGKTSSV 464
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +1
Query: 229 KYTGLPHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTT 384
K G H H + +RL + VW R L + ++LVGETG GKTT
Sbjct: 1176 KVPGFGHVVWTHNM--RRLAVLVW-------RALQFGEPVLLVGETGCGKTT 1218
>SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)
Length = 280
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +1
Query: 316 FMRLLNTH--QCIVLVGETGSGKT 381
F R+L QCIV+ GE+GSGKT
Sbjct: 223 FYRMLKEKKSQCIVISGESGSGKT 246
>SB_4502| Best HMM Match : SpoIIIAC (HMM E-Value=2.8)
Length = 82
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 180 NYQHDYHHGYQY 215
N++HDYHH YQY
Sbjct: 47 NHRHDYHHLYQY 58
>SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17)
Length = 1189
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 337 HQCIVLVGETGSGKTTQIPQWSVEFAAVSG 426
+QC+V+ GE+G+GKT AVSG
Sbjct: 918 NQCVVISGESGAGKTESTKFILQYLTAVSG 947
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +1
Query: 325 LLNTHQCIVLVGETGSGKT 381
++N H+ ++LVGETG+ KT
Sbjct: 520 MVNIHRPVLLVGETGTSKT 538
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 289 LPVWEYKNDFMRLLNTH--QCIVLVGETGSGKTT 384
L ++ K + +L T Q +VL+G +GSGKTT
Sbjct: 421 LAIYTDKTAYRNMLATRIDQSVVLMGSSGSGKTT 454
>SB_54473| Best HMM Match : DLIC (HMM E-Value=0)
Length = 1401
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 322 RLLNTHQCIVLVGETGSGKTTQI 390
R L +H+ I+L+G SGKTT I
Sbjct: 857 RKLPSHKSIILIGNDESGKTTLI 879
>SB_14248| Best HMM Match : AAA_5 (HMM E-Value=7.7e-14)
Length = 1083
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 322 RLLNTHQCIVLVGETGSGKTTQI 390
+L+ H+ ++ VG TGSGKT I
Sbjct: 591 KLVTNHKKVLCVGPTGSGKTLAI 613
>SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17)
Length = 546
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 319 MRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVS 423
MR T QC+++ GE+G+GKT + AA+S
Sbjct: 103 MREECTDQCMLISGESGAGKTEASKRILEYLAAIS 137
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,182,110
Number of Sequences: 59808
Number of extensions: 371295
Number of successful extensions: 970
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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