Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12l13f
(609 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 181 3e-46
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 181 3e-46
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 131 4e-31
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 131 4e-31
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 130 6e-31
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 130 6e-31
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 130 6e-31
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 126 9e-30
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 126 9e-30
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 103 8e-23
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 98 4e-21
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 91 8e-19
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 87 7e-18
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 85 4e-17
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 32 0.28
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 32 0.28
U39676-2|AAB37031.1| 143|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 30 1.5
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 30 1.5
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 29 2.6
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 4.5
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 4.5
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 4.5
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 28 4.5
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 28 4.5
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 28 4.5
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 4.5
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 28 6.0
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 28 6.0
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 181 bits (441), Expect = 3e-46
Identities = 90/133 (67%), Positives = 97/133 (72%), Gaps = 4/133 (3%)
Frame = +1
Query: 223 LNKYTGLPHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWS 402
+N Y P S RY + KR LPVWEYK FM LL +QCI LVGETGSGKTTQIPQW+
Sbjct: 54 INPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWA 113
Query: 403 VEFAAVSGLGKAKG----VACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGP 570
VEF G+ G VACTQPRRVAAMSVA RVAEEMDV LGQEVGYSIRFEDC
Sbjct: 114 VEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISE 173
Query: 571 QTLLKYMTDGMLL 609
+T+LKY TDGMLL
Sbjct: 174 RTVLKYCTDGMLL 186
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 181 bits (441), Expect = 3e-46
Identities = 90/133 (67%), Positives = 97/133 (72%), Gaps = 4/133 (3%)
Frame = +1
Query: 223 LNKYTGLPHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWS 402
+N Y P S RY + KR LPVWEYK FM LL +QCI LVGETGSGKTTQIPQW+
Sbjct: 54 INPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWA 113
Query: 403 VEFAAVSGLGKAKG----VACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGP 570
VEF G+ G VACTQPRRVAAMSVA RVAEEMDV LGQEVGYSIRFEDC
Sbjct: 114 VEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISE 173
Query: 571 QTLLKYMTDGMLL 609
+T+LKY TDGMLL
Sbjct: 174 RTVLKYCTDGMLL 186
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 131 bits (316), Expect = 4e-31
Identities = 62/114 (54%), Positives = 85/114 (74%)
Frame = +1
Query: 268 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 447
++ +R LP++ K + M + +Q +V+VGETGSGKTTQ+ Q+++E +GLG+ +
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIE----AGLGRRGKI 588
Query: 448 ACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
CTQPRRVAAMSVA+RVAEE LG +VGY+IRFEDC+ T++KYMTDGMLL
Sbjct: 589 GCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLL 642
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 131 bits (316), Expect = 4e-31
Identities = 62/114 (54%), Positives = 85/114 (74%)
Frame = +1
Query: 268 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 447
++ +R LP++ K + M + +Q +V+VGETGSGKTTQ+ Q+++E +GLG+ +
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIE----AGLGRRGKI 588
Query: 448 ACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
CTQPRRVAAMSVA+RVAEE LG +VGY+IRFEDC+ T++KYMTDGMLL
Sbjct: 589 GCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLL 642
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 130 bits (315), Expect = 6e-31
Identities = 62/110 (56%), Positives = 80/110 (72%)
Frame = +1
Query: 280 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQ 459
R LPV+ +++ F+ + HQ +++ GETGSGKTTQ+PQ+ E G K + CTQ
Sbjct: 361 RKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEG---GKRIGCTQ 417
Query: 460 PRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
PRRVAAMSVA RVA+E+ LG +VGYSIRFEDC+ +T+LKYMTDGMLL
Sbjct: 418 PRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLL 467
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 130 bits (315), Expect = 6e-31
Identities = 62/110 (56%), Positives = 80/110 (72%)
Frame = +1
Query: 280 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQ 459
R LPV+ +++ F+ + HQ +++ GETGSGKTTQ+PQ+ E G K + CTQ
Sbjct: 361 RKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEG---GKRIGCTQ 417
Query: 460 PRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
PRRVAAMSVA RVA+E+ LG +VGYSIRFEDC+ +T+LKYMTDGMLL
Sbjct: 418 PRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLL 467
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 130 bits (315), Expect = 6e-31
Identities = 62/110 (56%), Positives = 80/110 (72%)
Frame = +1
Query: 280 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQ 459
R LPV+ +++ F+ + HQ +++ GETGSGKTTQ+PQ+ E G K + CTQ
Sbjct: 361 RKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEG---GKRIGCTQ 417
Query: 460 PRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
PRRVAAMSVA RVA+E+ LG +VGYSIRFEDC+ +T+LKYMTDGMLL
Sbjct: 418 PRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLL 467
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 126 bits (305), Expect = 9e-30
Identities = 60/112 (53%), Positives = 84/112 (75%)
Frame = +1
Query: 274 RKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVAC 453
++R LPV+ + M ++ + +++VGETGSGKTTQ+ Q+ +E G G + + C
Sbjct: 436 QQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLE----DGFGDSGLIGC 491
Query: 454 TQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
TQPRRVAAMSVA+RVA+EM V LGQ+VGY+IRFEDC+ +T++KYMTDG+LL
Sbjct: 492 TQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILL 543
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 126 bits (305), Expect = 9e-30
Identities = 60/112 (53%), Positives = 84/112 (75%)
Frame = +1
Query: 274 RKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVAC 453
++R LPV+ + M ++ + +++VGETGSGKTTQ+ Q+ +E G G + + C
Sbjct: 436 QQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLE----DGFGDSGLIGC 491
Query: 454 TQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
TQPRRVAAMSVA+RVA+EM V LGQ+VGY+IRFEDC+ +T++KYMTDG+LL
Sbjct: 492 TQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILL 543
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 103 bits (248), Expect = 8e-23
Identities = 50/123 (40%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Frame = +1
Query: 247 HSQRYHEL--LRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAV 420
H+ Y L ++R+ LP+++ + + + ++ I++VGETG GK+TQ+PQ+ +E
Sbjct: 61 HNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLE---A 117
Query: 421 SGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDG 600
+ + TQPRRVA +++A RVAEE D LG +VGY++RF+D S T +K+MTDG
Sbjct: 118 GWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDG 177
Query: 601 MLL 609
+LL
Sbjct: 178 LLL 180
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical
protein T05E8.3 protein.
Length = 856
Score = 98.3 bits (234), Expect = 4e-21
Identities = 51/122 (41%), Positives = 78/122 (63%)
Frame = +1
Query: 244 PHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVS 423
PH + +E R LP+ + M L + + ++++GETGSGK+TQ+PQ V +
Sbjct: 147 PHFEANYEKF-SRPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVR----A 201
Query: 424 GLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGM 603
G+ + +A TQPRRVAA+S+A RVA EM +G VGY +RFE+ + +T ++YMTDG+
Sbjct: 202 GIANSGSIAVTQPRRVAAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGI 261
Query: 604 LL 609
+L
Sbjct: 262 VL 263
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 90.6 bits (215), Expect = 8e-19
Identities = 47/119 (39%), Positives = 75/119 (63%)
Frame = +1
Query: 253 QRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLG 432
Q+ +L + + LP+ E + + LL T+Q +++ G+TG GK+TQ+PQ+ ++ +G
Sbjct: 80 QKLQKLRKLQKELPIAERAGEIVELLKTNQVLIVAGDTGCGKSTQVPQYLLK----AGF- 134
Query: 433 KAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
GVACTQPRR+A ++A+RVA E G EV + IRFE +T L ++T+G+LL
Sbjct: 135 --TGVACTQPRRIACTALARRVAYETLNQYGSEVAFQIRFETTKSQKTKLLFLTEGLLL 191
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 87.4 bits (207), Expect = 7e-18
Identities = 46/122 (37%), Positives = 73/122 (59%)
Frame = +1
Query: 244 PHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVS 423
P S+ EL + R LP +Y + ++ +++ +++ G TG GKTTQ+PQ+ ++ A +
Sbjct: 166 PKSKCSKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHEN 225
Query: 424 GLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGM 603
K V TQPRR+AA+S+A+RVA E +G+ VGY +R + T+L Y T G+
Sbjct: 226 N--KHVRVMVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGV 283
Query: 604 LL 609
LL
Sbjct: 284 LL 285
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 85.0 bits (201), Expect = 4e-17
Identities = 49/119 (41%), Positives = 73/119 (61%)
Frame = +1
Query: 253 QRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLG 432
+R E+ + R LP++ + + +N + V+ GETGSGKTTQIPQ+ E A + G
Sbjct: 224 ERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYE-AGYASEG 282
Query: 433 KAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 609
+ G+ T+PRRVAA+++AQRV E+ A EV Y IR+E T + +MTDG+L+
Sbjct: 283 ELIGI--TEPRRVAAIAMAQRVGVEL--AKPDEVSYQIRYEGTRSETTNILFMTDGVLM 337
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 74.9 bits (176), Expect = 4e-14
Identities = 37/116 (31%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Frame = +1
Query: 265 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 444
++ +R LPV +Y+ + ++ + ++ ++ GETG GK+TQ+ Q+ +E + G +
Sbjct: 373 KITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFN 432
Query: 445 VACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCS-GPQTLLKYMTDGMLL 609
+QPRR++A+S+A+RVA E +G+ GY++RF+ + P + + T G+LL
Sbjct: 433 AVVSQPRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLL 488
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 32.3 bits (70), Expect = 0.28
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 478 MSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDG 600
++ + + E +VA+G+EVG ++ SGP ++KY +G
Sbjct: 480 IAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 32.3 bits (70), Expect = 0.28
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 478 MSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDG 600
++ + + E +VA+G+EVG ++ SGP ++KY +G
Sbjct: 480 IAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 32.3 bits (70), Expect = 0.28
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 478 MSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDG 600
++ + + E +VA+G+EVG ++ SGP ++KY +G
Sbjct: 480 IAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>U39676-2|AAB37031.1| 143|Caenorhabditis elegans Hypothetical
protein C23F12.3 protein.
Length = 143
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 571 VALNSLQNECCNQLPDPKPHP-FLRLPSEQQT*QPLVL 461
+A N+ Q C NQLP P P P F+++ +QQ + L L
Sbjct: 24 MAENNRQTRCANQLPPPAPVPDFIKVWVKQQKEKELAL 61
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 304 YKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGK 435
Y+N M + N QC+++ GE+G+GKT + +SG G+
Sbjct: 91 YRN--MLIDNESQCVIISGESGAGKTVNAKFIMNYISRISGGGQ 132
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 304 YKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGK 435
Y+N M + N QC+++ GE+G+GKT + +SG G+
Sbjct: 29 YRN--MLIDNESQCVIISGESGAGKTVNAKFIMNYISRISGGGQ 70
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 319 MRLLNTHQCIVLVGETGSGKT 381
M + +QC+V+ GE+GSGKT
Sbjct: 248 MLRIKENQCVVISGESGSGKT 268
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 316 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 468
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 158 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 209
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 28.3 bits (60), Expect = 4.5
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 286 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPR 465
GLPV KN + N Q + LVG +GSGK+T I F + G + G+ R
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLIRLLFRLFESTEGSIEFDGI---DVR 615
Query: 466 RVAAMSVAQR--VAEEMDVALGQEVGYSIRF 552
S+ Q+ + + V + Y+IRF
Sbjct: 616 NYTMHSLRQQIGIVPQDTVLFNDTIMYNIRF 646
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 316 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 468
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 158 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 209
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 316 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 468
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 161 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 212
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 4.5
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 286 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPR 465
GLPV KN + N Q + LVG +GSGK+T I F + G + G+ R
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLIRLLFRLFESTEGSIEFDGI---DVR 615
Query: 466 RVAAMSVAQR--VAEEMDVALGQEVGYSIRF 552
S+ Q+ + + V + Y+IRF
Sbjct: 616 NYTMHSLRQQIGIVPQDTVLFNDTIMYNIRF 646
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 4.5
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 286 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPR 465
GLPV KN + N Q + LVG +GSGK+T I F + G + G+ R
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLIRLLFRLFESTEGSIEFDGI---DVR 615
Query: 466 RVAAMSVAQR--VAEEMDVALGQEVGYSIRF 552
S+ Q+ + + V + Y+IRF
Sbjct: 616 NYTMHSLRQQIGIVPQDTVLFNDTIMYNIRF 646
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 28.3 bits (60), Expect = 4.5
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 286 GLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPR 465
GLPV KN + N Q + LVG +GSGK+T I F + G + G+ R
Sbjct: 562 GLPV--IKNISFEIGNG-QTVALVGSSGSGKSTLIRLLFRLFESTEGSIEFDGI---DVR 615
Query: 466 RVAAMSVAQR--VAEEMDVALGQEVGYSIRF 552
S+ Q+ + + V + Y+IRF
Sbjct: 616 NYTMHSLRQQIGIVPQDTVLFNDTIMYNIRF 646
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 337 HQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVA 474
++ +++VGETG GKTT + V G GK + + C + A
Sbjct: 1013 NEAVLMVGETGGGKTT--------LSEVVGRGKLRSINCHERTETA 1050
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 328 LNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 468
+N Q + +VG G+GK++ + E +SG G C P++
Sbjct: 685 VNRGQLVTIVGRVGAGKSSMLQALMGEMEKLSGSISMHGRLCYVPQQ 731
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 328 LNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 468
+N Q + +VG G+GK++ + E +SG G C P++
Sbjct: 685 VNRGQLVTIVGRVGAGKSSMLQALMGEMEKLSGSISMHGRLCYVPQQ 731
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 319 MRLLNTHQCIVLVGETGSGKT 381
MR + T Q I++ GE+G+GKT
Sbjct: 145 MRRIKTSQSIIVSGESGAGKT 165
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 340 QCIVLVGETGSGKTTQI 390
+CI LVG +GSGK+T I
Sbjct: 434 ECIALVGASGSGKSTVI 450
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,545,850
Number of Sequences: 27780
Number of extensions: 273619
Number of successful extensions: 847
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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