Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12l10r
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    74   1e-15
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.6  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 73.7 bits (173), Expect = 1e-15
 Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
 Frame = -2

Query: 702 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 523
           K   L  + +     + +IF  T+R  D+L   +  ++   +++HGD  Q ERE  +  F
Sbjct: 396 KRSKLVSILEKAPNERTLIFVETKRNADFLATFLSEQNIQSTSIHGDRYQSEREKALLDF 455

Query: 522 RTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTE 343
           +TG  +VL+ T + ARG+D++ V  VINYDLP + + Y                 +F  E
Sbjct: 456 KTGHRKVLVATGVAARGLDIKDVQHVINYDLPKSIDEYVHRIGRTGRVGNKGKATSFFDE 515

Query: 342 -ADRRALKDIEDFYHTSIVEMP 280
             DR    D+      +  E+P
Sbjct: 516 DQDRNLASDLAKILSQAKQEIP 537


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 447 RRKLAVHQYHVPINQW*SRHEKSQYET 527
           RRK A  +    +  W + H+K+ Y T
Sbjct: 87  RRKNATRESTATLKAWLNEHKKNPYPT 113


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 596 CVTLLYLLCME 564
           C+TLLY++C E
Sbjct: 322 CMTLLYIICNE 332


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 596 CVTLLYLLCME 564
           C+TLLY++C E
Sbjct: 322 CMTLLYIICNE 332


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = -2

Query: 123 LMITDFFSRSFLNPVPLTIFYI*FLHLTLNVDFKIILYF 7
           L+ T +F  +F+  + +  FY  F+  T+++ F + +Y+
Sbjct: 97  LLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYY 135


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 619 IHLATGVAENYSLC 660
           +HLA GV   YS+C
Sbjct: 123 VHLAYGVVIIYSIC 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,455
Number of Sequences: 336
Number of extensions: 3546
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)