Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12l10r
(718 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 3e-51
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 1e-43
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 101 8e-22
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 91 6e-19
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 91 6e-19
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 84 1e-16
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 5e-15
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 7e-13
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 7e-13
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 68 9e-12
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 67 1e-11
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 64 8e-11
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 63 2e-10
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 62 4e-10
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 56 4e-08
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 41 4e-08
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 55 5e-08
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 51 8e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 48 8e-06
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 48 8e-06
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 46 3e-05
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 42 4e-04
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 42 5e-04
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 42 5e-04
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 39 0.004
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 39 0.005
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 36 0.043
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 33 0.18
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 30 1.6
SB_55747| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_35874| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4) 29 3.8
SB_28158| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_2355| Best HMM Match : Carn_acyltransf (HMM E-Value=0) 29 3.8
SB_47833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 29 3.8
SB_27380| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_24618| Best HMM Match : 7tm_1 (HMM E-Value=0.017) 29 5.0
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 28 6.6
SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7) 28 8.7
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 198 bits (484), Expect = 3e-51
Identities = 96/153 (62%), Positives = 112/153 (73%)
Frame = -2
Query: 717 ELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREV 538
E EEWK +TLCDLYDTL+I QAVIFCNT+RKVDWLTE M +FTV++MHGDM Q+ERE
Sbjct: 218 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREA 277
Query: 537 IMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXI 358
IM+ FR G SRVLI+TD+ ARG+DVQQVS VINYDLP+NRE Y I
Sbjct: 278 IMKDFRAGQSRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAI 337
Query: 357 NFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 259
NFV D R L+DIE +Y T I EMP +VA+LI
Sbjct: 338 NFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI 370
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 173 bits (421), Expect = 1e-43
Identities = 79/103 (76%), Positives = 91/103 (88%)
Frame = -2
Query: 717 ELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREV 538
E E+WKL+TLCDLY+TL+I QAVIF NTRRKVDWL M +D TVS+MHGDM Q+ER++
Sbjct: 312 EKEDWKLDTLCDLYETLTITQAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDI 371
Query: 537 IMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 409
IM++FR+GSSRVLITTDLLARGIDV QVS VINYDLPSNRENY
Sbjct: 372 IMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSNRENY 414
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 101 bits (241), Expect = 8e-22
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Frame = -2
Query: 708 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 529
E K E LC++Y LSI Q V+FC+TRR WL E M V+ + G++ +R ++
Sbjct: 329 EDKFEALCNMYGVLSIGQCVVFCHTRRNAAWLAEKMVKEGHAVALLSGEITIEQRIAVLE 388
Query: 528 QFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP------SNRENYXXXXXXXXXXXXXX 367
+FR G ++LITT++ ARGIDV+QV+ VINYD+P ++ E Y
Sbjct: 389 RFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQGKADFETYLHRIGRTGRFGKSG 448
Query: 366 XXINFVT-EADRRALKDIEDFYHTSIVEMPSD 274
+NF+ + +K IE+ + I + +D
Sbjct: 449 IAVNFIDGQRSMNIMKKIEEHFGKKIQHLQAD 480
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 91.5 bits (217), Expect = 6e-19
Identities = 51/145 (35%), Positives = 72/145 (49%)
Frame = -2
Query: 711 EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 532
E+ K+ L L+ L I Q++IFCN+ ++V+ L + F+ +H M Q R +
Sbjct: 275 EKQKVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVF 334
Query: 531 RQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINF 352
FR G R L+ +DL RGID+Q V+ VIN+D P N E Y IN
Sbjct: 335 HDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINL 394
Query: 351 VTEADRRALKDIEDFYHTSIVEMPS 277
+T DR L IE+ T I +PS
Sbjct: 395 ITYDDRFDLYKIENELDTEIKPIPS 419
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 91.5 bits (217), Expect = 6e-19
Identities = 51/145 (35%), Positives = 72/145 (49%)
Frame = -2
Query: 711 EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 532
E+ K+ L L+ L I Q++IFCN+ ++V+ L + F+ +H M Q R +
Sbjct: 275 EKQKVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVF 334
Query: 531 RQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINF 352
FR G R L+ +DL RGID+Q V+ VIN+D P N E Y IN
Sbjct: 335 HDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINL 394
Query: 351 VTEADRRALKDIEDFYHTSIVEMPS 277
+T DR L IE+ T I +PS
Sbjct: 395 ITYDDRFDLYKIENELDTEIKPIPS 419
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 702 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 523
K L DL D L Q +IF + ++ L+ + ++F +H M Q ER +QF
Sbjct: 322 KNRKLFDLLDLLEFNQVIIFVKSVQRCTALSHLLLKQNFPAICIHRGMKQEERLARYQQF 381
Query: 522 RTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVT- 346
+ R+L+ T+L RG+D+++V+ V NYD+P + + Y I FV+
Sbjct: 382 KNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSD 441
Query: 345 EADRRALKDIEDFYHTSIVEMPSDV 271
EAD + L +++D + ++ E+P ++
Sbjct: 442 EADAKTLNEVQDRFEVNVGELPDEI 466
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 78.6 bits (185), Expect = 5e-15
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Frame = -2
Query: 702 KLETLCDLYDTLSIAQ-AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 526
K L DL + Q ++F T++ D L + + +++HGD QRERE +R
Sbjct: 1086 KRSFLLDLLNASGPQQLTLVFVETKKGADALEMFLAKDGYYCTSIHGDRSQREREEALRT 1145
Query: 525 FRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVT 346
FR G + +L+ T + ARG+D+ V VIN+DLP++ E Y +F
Sbjct: 1146 FRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRIGRTGRVGHTGLATSFFN 1205
Query: 345 EADRRALKDIEDFYHTSIVEMPS 277
++ K++ D S E+PS
Sbjct: 1206 HKNKNVAKELMDILEESKQEIPS 1228
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/88 (36%), Positives = 52/88 (59%)
Frame = -2
Query: 672 TLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLIT 493
+L + Q +IF + VD + E + L+ A+HGD Q ER +R+F G+ VL+
Sbjct: 84 SLDVIQVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVA 143
Query: 492 TDLLARGIDVQQVSCVINYDLPSNRENY 409
TD+ ++G+D + VIN+D+P + ENY
Sbjct: 144 TDVASKGLDFPDIQHVINFDMPEDIENY 171
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/88 (36%), Positives = 52/88 (59%)
Frame = -2
Query: 672 TLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLIT 493
+L + Q +IF + VD + E + L+ A+HGD Q ER +R+F G+ VL+
Sbjct: 84 SLDVIQVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVA 143
Query: 492 TDLLARGIDVQQVSCVINYDLPSNRENY 409
TD+ ++G+D + VIN+D+P + ENY
Sbjct: 144 TDVASKGLDFPDIQHVINFDMPEDIENY 171
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/98 (34%), Positives = 55/98 (56%)
Frame = -2
Query: 702 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 523
K + L + + ++F ++R D+L + F +++HGD Q+ERE + F
Sbjct: 949 KRDRLTQILGDAGTDRTLVFVESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREEALDDF 1008
Query: 522 RTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 409
R G VLI T++ ARG+D+ V VIN+DLPS+ + Y
Sbjct: 1009 RKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDIDEY 1046
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 67.7 bits (158), Expect = 9e-12
Identities = 32/122 (26%), Positives = 63/122 (51%)
Frame = -2
Query: 651 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 472
++F +T + L H T +H + Q ER + +F++G+ ++L+ TD+ +RG
Sbjct: 251 IVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFKSGTIKILVATDVASRG 310
Query: 471 IDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTSI 292
+D+ QV V+N ++P++ ++Y I+ VT+ D +K IE+ +T +
Sbjct: 311 LDIPQVELVVNSNIPADPKDYIHRVGRTARAGRGGMAISMVTQYDIDRVKKIEEKINTKL 370
Query: 291 VE 286
E
Sbjct: 371 TE 372
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/98 (32%), Positives = 54/98 (55%)
Frame = -2
Query: 702 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 523
K + L + T ++F ++ + VD++TE + F S +H + Q R +++ F
Sbjct: 319 KPQKLLETLRTTPYPPVIVFTSSIQNVDYVTELLKQEQFHASGLHSEKPQDYRFKLVKAF 378
Query: 522 RTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 409
R G +L+ TD+ +RG+D +V+ VINYDLP E Y
Sbjct: 379 RDGKVDILVATDVASRGLDFPEVTHVINYDLPDTIECY 416
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 64.5 bits (150), Expect = 8e-11
Identities = 29/100 (29%), Positives = 51/100 (51%)
Frame = -2
Query: 594 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRE 415
+ F + +HG +Q +RE + + GS +L+ TD+ RGID++ VS VINYD+ E
Sbjct: 307 KKFRATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTIE 366
Query: 414 NYXXXXXXXXXXXXXXXXINFVTEADRRALKDIEDFYHTS 295
+Y ++F+T++D D++ +S
Sbjct: 367 DYTHRIGRTGRAGKTGIAVSFLTQSDSGVFYDLKQLLLSS 406
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/101 (33%), Positives = 52/101 (51%)
Frame = -2
Query: 711 EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 532
E KL + D+ +IF ++ + L + V +H D Q +R+ I+
Sbjct: 367 ESGKLLAVRDIVQKGFTPPVLIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIV 426
Query: 531 RQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 409
+ FRTG VLI T+L+ RGID + V+ VINYD P++ Y
Sbjct: 427 KSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVAY 467
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/83 (32%), Positives = 51/83 (61%)
Frame = -2
Query: 657 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 478
+ +IF T+++ + L + L+ T +HGD+ Q++REV ++ FR G R L+ TD+ A
Sbjct: 307 RTMIFAQTKKEANELALNSVLKQET-QVLHGDIPQKQREVTLKSFREGKFRCLVATDVAA 365
Query: 477 RGIDVQQVSCVINYDLPSNRENY 409
RG+D+ ++ V+ + P + + Y
Sbjct: 366 RGLDIPEIDLVVQCEPPKDVDAY 388
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/78 (32%), Positives = 45/78 (57%)
Frame = -2
Query: 561 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXX 382
++Q +RE + F+TG +R+LI TD+ +RG+D++ ++ VINYD P + E+Y
Sbjct: 76 LEQYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVHRVGRTGR 135
Query: 381 XXXXXXXINFVTEADRRA 328
+ F++ D R+
Sbjct: 136 AGRSGTSLTFISREDWRS 153
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = -2
Query: 567 GDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXX 388
G Q +R M + ++ R+LI+TDL ARGID + V+ V+N D+P N E Y
Sbjct: 246 GSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLHRIGRA 305
Query: 387 XXXXXXXXXINFVTEA-DRRALKDIEDFYHTSIVEMPSDVANLI 259
+ +V + R L+DIE + +P+ + + +
Sbjct: 306 GRFGTEGMAVTYVANGKEERELRDIERSIDVKMELLPAHIPDTL 349
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 40.7 bits (91), Expect(2) = 4e-08
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = -2
Query: 567 GDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 409
G+ R R +F+ ++ +L+ TD+ +RG+D VS VIN+D P++ +Y
Sbjct: 728 GNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDFPNSMVDY 780
Score = 34.3 bits (75), Expect(2) = 4e-08
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -2
Query: 702 KLETLCDLY--DTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDM 559
K E + +L D+ S Q ++FCN+ DWL + + ++ +HG++
Sbjct: 639 KAERIVELLKKDSKSPGQTIVFCNSASSCDWLARHLEQHNLSLIRLHGNI 688
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = -2
Query: 531 RQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINF 352
+QF+ R+L+ T+L RG+D+++V+ V NYD+P + + Y I F
Sbjct: 6 QQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF 65
Query: 351 VT-EADRRALKDIEDFYHTSI 292
V+ EAD + L +++D + ++
Sbjct: 66 VSDEADAKTLNEVQDRFEVNV 86
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/83 (31%), Positives = 46/83 (55%)
Frame = -2
Query: 657 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 478
+ ++F NT V LT + L +H M QR+R + +F+ ++ +L+ TD+ A
Sbjct: 458 RTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATDVAA 517
Query: 477 RGIDVQQVSCVINYDLPSNRENY 409
RG+D+ + VI+Y +P + E Y
Sbjct: 518 RGLDIANIEHVIHYQVPKDPEVY 540
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 51.2 bits (117), Expect = 8e-07
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = -2
Query: 651 VIFCNTRRKVDWLTESM--HLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 478
++F +T V++ ++++ L + + A+HG M + R I FR S +L+ TD++A
Sbjct: 93 MVFFSTCACVNYFSKALTKFLPNVHIMALHGKM-KSNRHKIFDSFRKLESGILVCTDVMA 151
Query: 477 RGIDVQQVSCVINYDLPSN 421
RG+D+ +V+ VI YD PS+
Sbjct: 152 RGVDIPEVNWVIQYDPPSS 170
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/83 (26%), Positives = 45/83 (54%)
Frame = -2
Query: 657 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 478
+ ++F ++ V + +E ++ D V +HG Q++R +F S +L+ TD+ A
Sbjct: 820 KVMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAA 879
Query: 477 RGIDVQQVSCVINYDLPSNRENY 409
RG+D+ +V ++ YD + + Y
Sbjct: 880 RGLDIPEVDWIVQYDPADDPKEY 902
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 48.0 bits (109), Expect = 8e-06
Identities = 27/70 (38%), Positives = 33/70 (47%)
Frame = -2
Query: 486 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDIEDF 307
L RGID+Q V+ VIN+D P N E Y IN +T DR L IE+
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDRFDLYKIENE 61
Query: 306 YHTSIVEMPS 277
T I +PS
Sbjct: 62 LDTEIKPIPS 71
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 48.0 bits (109), Expect = 8e-06
Identities = 27/70 (38%), Positives = 33/70 (47%)
Frame = -2
Query: 486 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXINFVTEADRRALKDIEDF 307
L RGID+Q V+ VIN+D P N E Y IN +T DR L IE+
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDRFDLYKIENE 61
Query: 306 YHTSIVEMPS 277
T I +PS
Sbjct: 62 LDTEIKPIPS 71
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = -2
Query: 702 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDM---DQREREVIM 532
K + L +Y++ + A++F + VD + +A++ + D + +
Sbjct: 412 KAQVLAKIYESSNQKSALVFIHRNHSVDDFVWELRYLGLNAAALYKQVAIPDPTKYHKFL 471
Query: 531 RQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 409
R FRTG ++L+ T+ RG+D +++ V ++P N E Y
Sbjct: 472 RDFRTGQIQLLVGTEETVRGLDFKELDHVYLMEVPKNVEEY 512
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = -2
Query: 669 LSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 490
+S +IF + + L ++ DF V+ +HGDMDQ ER ++ QF+ +L+ T
Sbjct: 727 ISAGSVLIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQFKKREIPILVAT 786
Query: 489 DL 484
D+
Sbjct: 787 DV 788
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = -2
Query: 624 VDWLTESMHLRD-FTVSAMHGD------MDQREREVIMRQFRTGSSRVLITTDLLARGID 466
V+W+ ES L+ F A+ G M Q+E+E+I+ +F+ G +LI T + G+D
Sbjct: 954 VEWIKESEDLKHKFRPKALVGGGDGVVGMSQQEQELIIEEFKKGVVNILIATSVAEEGLD 1013
Query: 465 VQQVSCVINYDLPSN 421
++ S VI YD N
Sbjct: 1014 IKDCSFVIRYDTYGN 1028
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = -2
Query: 609 ESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSS-RVLITTDLLARGIDVQQVSCVINYD 433
E M LR S G M QRE+E ++ +FR GS ++I T + G+D+ S VI YD
Sbjct: 583 ELMPLRLVGNSDGRGGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYD 642
Query: 432 LPSN 421
+ N
Sbjct: 643 MMGN 646
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = -2
Query: 549 EREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 421
E+EVI++ FRTG ++LI+T +L G+DV + V+ +D N
Sbjct: 605 EQEVILKSFRTGRIKLLISTSVLEEGLDVPVCNLVVRFDSTMN 647
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = -2
Query: 597 LRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 433
L V A+H +D E++++M +F G S+VLI+T ++ G+DV + ++ D
Sbjct: 90 LAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMVIMD 144
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = -2
Query: 651 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 472
++F T+ L + L +HG++ Q +R +++F+ G +L+ TDL ARG
Sbjct: 12 LVFLQTKWMAHKLRIVLGLMGLNADELHGNLTQLQRLEALQKFKNGEVDILVATDLAARG 71
Query: 471 IDVQQV 454
+D+ V
Sbjct: 72 LDITGV 77
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = -2
Query: 579 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 427
S ++ +DQ R + + +F+ + V++ TD+ ARGID+ + VIN+ P
Sbjct: 503 SYVYSSLDQTARTINVGKFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFP 553
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -2
Query: 570 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 409
H M +R + ++F +G R + T G+D V +I+Y++P + E+Y
Sbjct: 819 HAGMSAAQRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFESY 872
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = -2
Query: 579 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 409
S+ M ++E +++ FR +L+ T ++ G+DV + + V+ +D P N +Y
Sbjct: 122 SSSDTQMGSTKQEKVLKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSY 178
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/81 (20%), Positives = 35/81 (43%)
Frame = -2
Query: 651 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 472
+I+C TR + + + + H + +R+ + +++ G V+ T G
Sbjct: 252 IIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISFGMG 311
Query: 471 IDVQQVSCVINYDLPSNRENY 409
+D V V ++ LP + E Y
Sbjct: 312 VDKGDVRFVAHWSLPQSMEGY 332
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 35.5 bits (78), Expect = 0.043
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = -2
Query: 615 LTESMHLRDFTVSAMHGDM-DQREREVIMRQFRTGSS-RVLITTDLLARGIDVQQVSCVI 442
L+E++ ++ T + H D ++EV+ ++ S RV++ T L G+D+ V +I
Sbjct: 276 LSENVESKE-TYAMFHSKTPDSIQKEVLGEFIKSNSKIRVVVATCALGMGVDIPDVDHII 334
Query: 441 NYDLPSNRENY 409
++ +PS E+Y
Sbjct: 335 HFGIPSEVEHY 345
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = -2
Query: 651 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 472
+I+C +R+ + + M R + H DM R S+V++ T G
Sbjct: 317 IIYCFSRKDAEQVAIEMSSRGIKAACYHADMPPESR-----------SQVVVATVAFGMG 365
Query: 471 IDVQQVSCVINYDLPSNRENY 409
ID V VI++ + ENY
Sbjct: 366 IDKSNVRFVIHHSFSKSMENY 386
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 582 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDV 463
V+ H + ER++I FR G+ RVL+ T L G+++
Sbjct: 557 VAFHHAGLTFDERDIIEGAFRQGTIRVLVATSTLCSGVNL 596
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -2
Query: 561 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 433
+ Q+E+ ++ +FR G L++T + G+D+ V ++ +D
Sbjct: 564 LSQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFD 606
>SB_55747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 675 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 586
+T +A+ + FC T RK+DW + + DF
Sbjct: 8 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 37
>SB_35874| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4)
Length = 494
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -2
Query: 558 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNREN 412
D ++EV+ + + RV + T +L + + V +I+Y +PS E+
Sbjct: 8 DYIQKEVLEEFTKPNNIRVAVATRVLGFRVSILHVESLIHYGIPSEEEH 56
>SB_28158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 675 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 586
+T +A+ + FC T RK+DW + + DF
Sbjct: 87 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 116
>SB_2355| Best HMM Match : Carn_acyltransf (HMM E-Value=0)
Length = 1559
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 675 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 586
+T +A+ + FC T RK+DW + + DF
Sbjct: 87 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 116
>SB_47833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 675 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 586
+T +A+ + FC T RK+DW + + DF
Sbjct: 87 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 116
>SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 785
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 675 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 586
+T +A+ + FC T RK+DW + + DF
Sbjct: 287 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 316
>SB_27380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 675 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 586
+T +A+ + FC T RK+DW + + DF
Sbjct: 8 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 37
>SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1455
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 675 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 586
+T +A+ + FC T RK+DW + + DF
Sbjct: 51 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 80
>SB_24618| Best HMM Match : 7tm_1 (HMM E-Value=0.017)
Length = 192
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 171 NALWILLCGNNKSKFPLMITDFFSRSFLNPV 79
NA+W GNN + + + F+ SF+NPV
Sbjct: 122 NAVWTAGSGNNTTLAKIAFSGRFANSFVNPV 152
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = -2
Query: 555 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 376
+ E+EVI Q + I +RG+D+ V+ VI D ++
Sbjct: 84 KEEKEVIEAQLPLSYNSRTIKDGFASRGLDIPNVTHVIQLDFATDAAQMLHRVGRTARAG 143
Query: 375 XXXXXINFVTEAD 337
+NF+T+ D
Sbjct: 144 SHGKVVNFITKDD 156
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -2
Query: 660 AQAVIFCNTRRKVDWLTESMHLRD--FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTD 487
++ ++F ++ ++V ++ E + A++G Q +R I +F + VL TD
Sbjct: 274 SKILVFVSSCKQVKFIYEGFRRLQPGIPLMALYGKQKQLKRVAIYDEFCKKTQCVLFATD 333
Query: 486 LLARGI 469
+ ARG+
Sbjct: 334 IAARGL 339
>SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7)
Length = 325
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 683 TCMIHCLLHKL*FSATPVARWIG 615
T + C+L + FSA P +RW+G
Sbjct: 281 TARVSCMLQREMFSAFPCSRWLG 303
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,304,198
Number of Sequences: 59808
Number of extensions: 430159
Number of successful extensions: 895
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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