Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12l09r
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.042
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 0.042
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -3

Query: 331 FVLFKFYFLIHILLLHTYYCGFI-TIAFIIL*SHQLFILLV 212
           F+LF  + L+ + + + YY   +   AFII   H LF+L +
Sbjct: 245 FILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCI 285


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 177 SEG*NLIITDYSTSKMKSWCDYNIIKAIVI 266
           SEG +      S S + S  DYNI+ A+V+
Sbjct: 187 SEGFDYFFGKMSYSHIFSLMDYNIVMALVL 216


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 177 SEG*NLIITDYSTSKMKSWCDYNIIKAIVI 266
           SEG +      S S + S  DYNI+ A+V+
Sbjct: 187 SEGFDYFFGKMSYSHIFSLMDYNIVMALVL 216


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 177 SEG*NLIITDYSTSKMKSWCDYNIIKAIVI 266
           SEG +      S S + S  DYNI+ A+V+
Sbjct: 187 SEGFDYFFGKMSYSHIFSLMDYNIVMALVL 216


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 349 RSKGGGFVLFKFYFLIHILL 290
           R+   GF LF  +FL HI++
Sbjct: 660 RANNPGFWLFHCHFLFHIVI 679


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 207 YSTSKMKSWCDYNIIKAIVINPQ**VCS 290
           Y  S+     DY I + +V+NP   +C+
Sbjct: 434 YQPSQAPPTYDYGIPQGVVLNPLDAICN 461



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 349 RSKGGGFVLFKFYFLIHILL 290
           R+   G+ LF  +FL HI++
Sbjct: 660 RADNPGYWLFHCHFLFHIVI 679


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,924
Number of Sequences: 336
Number of extensions: 3403
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)