Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12l08r
(761 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 54 2e-07
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 48 6e-06
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 47 1e-05
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 47 2e-05
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 45 8e-05
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.003
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.027
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.036
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.063
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 35 0.083
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.44
SB_39703| Best HMM Match : PHD (HMM E-Value=9.3e-12) 32 0.58
SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17) 32 0.58
SB_20294| Best HMM Match : Orthopox_F6 (HMM E-Value=8.1) 32 0.58
SB_46020| Best HMM Match : PHD (HMM E-Value=9.3e-12) 32 0.58
SB_45996| Best HMM Match : VWA (HMM E-Value=2.6e-12) 31 1.0
SB_35444| Best HMM Match : Hist_deacetyl (HMM E-Value=1.90577e-43) 30 1.8
SB_12340| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_33601| Best HMM Match : Metallophos (HMM E-Value=6.4e-19) 30 2.4
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 30 2.4
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_51704| Best HMM Match : F-box (HMM E-Value=3.3e-05) 29 4.1
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.1
SB_35188| Best HMM Match : RVT_1 (HMM E-Value=2.3e-25) 29 5.5
SB_39498| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_30177| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 58.8 bits (136), Expect = 4e-09
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 10/211 (4%)
Frame = -2
Query: 619 QQCAGAVLTNFHILSVATCFSGAFYRPDTRRIRLGSDIRNEGGLIVNVLLA----NNHHS 452
Q C G ++T +++ A C P + ++RLG+ R V + ++ +NH
Sbjct: 655 QFCGGTLVTPEWVITAAHCVVDK--NPASIQVRLGAQDRTSPDPSVEMRISIRSIHNHPD 712
Query: 451 F-DPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGAVTD 275
+ P ++DI+++RLS L I A + VH P + GWG GG+ +
Sbjct: 713 YGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSSGGSQPE 772
Query: 274 D-NLYGLSLTTVDRYTCRSKYEDREVTNTMLCFGLPREGGRDFFTRDVGAPVFYQNA--- 107
N + L T R C Y + ++ M+C G P EGG D D G P+ Q+
Sbjct: 773 ALNQAVVPLRT--RSECERSYPGK-ISADMICAGNP-EGGVDTCQGDSGGPLVCQHGNQW 828
Query: 106 -LISLISFGESDANNEYPLVGTGISDYTNWI 17
L + S+G A V G+ W+
Sbjct: 829 FLTGVTSWGHGCAFAGKYGVYAGVQQLKQWV 859
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 58.4 bits (135), Expect = 6e-09
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 7/197 (3%)
Frame = -2
Query: 691 GTRVPISDRPSLAQVEVALGNVWIQQCAGAVLTNFHILSVATCFSGAFYRPDTRRI---- 524
GT PI+ P A + + Q C G+++ +L+ A C G +PD+ +
Sbjct: 33 GTEAPINGWPWQAMLLRSPNGD--QFCGGSLIDPGWVLTAAHCLVGE--QPDSALLGAHY 88
Query: 523 RLGSDIRNEGGL-IVNVLLANNHHSFDPTNMASDISVVRLSSAITLGGNIQQASVILQGV 347
R + E + + ++ N+HS P MA+DI++++L + L + +
Sbjct: 89 RSNKTVGTEKDIKVAQIIPHKNYHS--PIEMANDIALLKLENPANLVNGVGTVCLANNNT 146
Query: 346 HVPPRL--SVELIGWGNTPQGGAVTDDNLYGLSLTTVDRYTCRSKYEDREVTNTMLCFGL 173
H+P + GWG+ GGA D L S+ V + C + ++ +MLC GL
Sbjct: 147 HLPVDEFGKCYITGWGSLSSGGA-APDRLMQASVPLVSKSRCDTGNYTGKIHESMLCAGL 205
Query: 172 PREGGRDFFTRDVGAPV 122
+GG D D G P+
Sbjct: 206 -EQGGVDSCQGDSGGPL 221
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 53.6 bits (123), Expect = 2e-07
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Frame = -2
Query: 619 QQCAGAVLTNFHILSVATCFSGAFYRPD---TRRIRLGSDIRNEGGLI-----VNVLLAN 464
Q C GA++ +++ + C + RP+ T I LG N+ G++ + +
Sbjct: 238 QFCGGALVHEDWVVTASHCINDI--RPEDYKTHIISLGG--HNKTGIMSVEQRIGIAKIY 293
Query: 463 NHHSFD--PTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQG 290
H ++ P +D++++RL+ +Q + V PP + GWG G
Sbjct: 294 LHADYNLYPHQYNNDVALIRLAKPAIRTRYVQPVCLADGTVSFPPGTECWITGWGRLHSG 353
Query: 289 GAVTDD-NLYGLSLTTVDRYTCRSKYEDREVTNTMLCFGLPREGGRDFFTRDVGAPVFYQ 113
GA + L + T YE V++TMLC +P G D D G P+ +
Sbjct: 354 GASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCAQVP---GIDTCQGDSGGPLVCE 410
Query: 112 N----ALISLISFGESDANNEYPLVGTGISDYTNWIIEN 8
N L+ + S+G A+ +YP + +++ +W+ +
Sbjct: 411 NNNKWTLVGVTSWGYGCAHPDYPGIYAKLTELKDWVFHH 449
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 48.8 bits (111), Expect = 5e-06
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 5/177 (2%)
Frame = -2
Query: 691 GTRVPISDRPSLAQVEVALGNVWIQQCAGAVLTNFHILSVATCFSGAFYRPDTRRIRLGS 512
GT D P AQ+ + + W +C G ++ +++ A C P +I+LG+
Sbjct: 288 GTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCVFQNI-EPSNYKIKLGA 346
Query: 511 DIR--NEGGLIVNVLLANNHHSF-DPTNMASDISVVRLSSAITLGGNIQQASVILQGVHV 341
R +EG L + V + H F + DI++++L++ +G I A + V
Sbjct: 347 HDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIMKLANPAPIGHTISPACLPGLYDQV 406
Query: 340 PPRLSVELIGWGNTPQGGAVTDDNLYGLSLTTVDRYTC-RSKYEDREVTN-TMLCFG 176
+ GWG T G A L + V C R + R+V TMLC G
Sbjct: 407 TSGTMCYVTGWGMTEYGNAGA-RLLQQARIPVVSSEECERVNNKHRKVDKVTMLCAG 462
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 48.4 bits (110), Expect = 6e-06
Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 6/152 (3%)
Frame = -2
Query: 541 PDTRRIRLGSDIRNE---GGLIVNVLLANNHHSFDPTNMASDISVVRLSSAITLGGNIQQ 371
P ++RLG IR + + + H + P + SDI+++RL+ +T ++
Sbjct: 169 PSLIKVRLGKHIRQKIEKTEQSYDAEMYKIHPHYSPDSYDSDIALIRLAQPVTFTDYVKP 228
Query: 370 A---SVILQGVHVPPRLSVELIGWGNTPQGGAVTDDNLYGLSLTTVDRYTCRSKYEDREV 200
S + +S + GWG + L+ ++ VD TCR + D V
Sbjct: 229 ICLPSAASDYAQLQANVSGTISGWGKRKLWRDRVANRLHEATVPIVDIQTCRKAHPDYIV 288
Query: 199 TNTMLCFGLPREGGRDFFTRDVGAPVFYQNAL 104
T M C G D D G P N L
Sbjct: 289 TANMFCAGFENSSRGDACQGDSGGPFSVDNPL 320
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 48.0 bits (109), Expect = 8e-06
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 3/185 (1%)
Frame = -2
Query: 652 QVEVALGNVWIQQCAGAVLTNFHILSVATCFSGAFYRPDTRRIRLG-SDIRNEG--GLIV 482
QV + L +Q+C GA++ +L+ A CF F P +++G SD+R G +
Sbjct: 1253 QVALTLSGNPVQRCGGALIAADWVLTAAHCFD-RFSMPPEWTVQVGVSDMRRRDGKGQSL 1311
Query: 481 NVLLANNHHSFDPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGN 302
++ H ++ ++ D++V++L + ++ V + + GWG
Sbjct: 1312 SIKAIFVHPQYNSSSHEHDLAVLQLQQPAEFNSRVSPICIV-ANEEVQAGRACAVAGWGQ 1370
Query: 301 TPQGGAVTDDNLYGLSLTTVDRYTCRSKYEDREVTNTMLCFGLPREGGRDFFTRDVGAPV 122
+ +T L + + R C + VT MLC G P G D D G+P+
Sbjct: 1371 S-YLPRITTIPLLTRRMRVIGRTDCAA--AQSRVTAQMLCAG-PAAGESDNCFGDGGSPL 1426
Query: 121 FYQNA 107
Q A
Sbjct: 1427 MCQGA 1431
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 47.2 bits (107), Expect = 1e-05
Identities = 37/166 (22%), Positives = 57/166 (34%), Gaps = 4/166 (2%)
Frame = -2
Query: 502 NEGGLIVNVLLANNHHSFDPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSV 323
N ++ V H F DI++++L L + A + G P
Sbjct: 9 NTAEQVIKVKRIFKHSGFSMWRYRDDIALLQLERPAQLNDRVNVACLPSPGDVPPVGSKC 68
Query: 322 ELIGWGNTPQGGAVTDDNLYGLSLTTVDRYTCRSKYEDREVTNTMLCFGLPREGGRDFFT 143
L GWG D L + C+ KY + T LC G +
Sbjct: 69 WLTGWGRQVDSSGPLPDILQQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGACQ 128
Query: 142 RDVGAPVFYQN----ALISLISFGESDANNEYPLVGTGISDYTNWI 17
D G P+ + L ++SFG + V T +S+Y +WI
Sbjct: 129 GDSGGPLVCERNGQWTLYGVVSFGAGNCEVTSYTVYTKVSNYLDWI 174
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = -2
Query: 451 FDPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGAVTD- 275
F+PT + +DI++++L+ L + A + QG + GWG T G +
Sbjct: 437 FEPTAINNDIALIKLNKPARLNKYVNLACLPRQGEELSDGKICYATGWGLTVGGDWKSQS 496
Query: 274 DNLYGLSLTTVDRYTCRSKYEDREVTNTMLCFG 176
D L L V+R C++ Y+D +T M+C G
Sbjct: 497 DVLKQTPLPVVNRQECQTDYDDIPITTAMMCTG 529
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 44.8 bits (101), Expect = 8e-05
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 4/152 (2%)
Frame = -2
Query: 460 HHSFDPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGAV 281
H +D + +DI+++ LS + + + L P + GWG+T G
Sbjct: 160 HPEYDDRKIKNDIALLELSRPVKFDREGKVGTACLTNQQPTPGKRCYITGWGST-IGTGN 218
Query: 280 TDDNLYGLSLTTVDRYTCRSKYEDREVTNTMLCFGLPREGGRDFFTRDVGAPVFYQN--- 110
+ L L C++KY T LC G R G D G P+ ++
Sbjct: 219 SPRILQQAMLPIASHNDCKNKYYGVSST-AHLCAGEARSGASGGCNGDSGGPLVCEDNGR 277
Query: 109 -ALISLISFGESDANNEYPLVGTGISDYTNWI 17
L +S+G+ Y V ++ YT+WI
Sbjct: 278 WYLHGAVSYGKLHCPTTYYTVFARVASYTDWI 309
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 4/152 (2%)
Frame = -2
Query: 460 HHSFDPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGAV 281
H ++ + +DI+++ L++ + + +V L P + GWG
Sbjct: 514 HPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWGAINGDTQQ 573
Query: 280 TDDNLYGLSLTTVDRYTCRSKYEDREVTNTMLCFGLPREGGRDFFTRDVGAPVFYQN--- 110
+ D L L CR KY D T LC G R D G P+ ++
Sbjct: 574 SPDILQQAMLPIASHENCRRKYGDVSST-AHLCAGEARSDAAGGCNGDSGGPLVCEDNGS 632
Query: 109 -ALISLISFGESDANNEYPLVGTGISDYTNWI 17
L +S+G + + V ++ YT+WI
Sbjct: 633 WFLHGAVSYGLRNCPTTHYTVFARVASYTDWI 664
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 40.7 bits (91), Expect = 0.001
Identities = 33/112 (29%), Positives = 48/112 (42%)
Frame = -2
Query: 487 IVNVLLANNHHSFDPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGW 308
I + + N+HS P A+DI+++ L L A + + +P + GW
Sbjct: 321 IQRIFMHPNYHS--PVQYANDIALLLLDRPARLDRYTNLACLAPRSSPLPDGTRCWISGW 378
Query: 307 GNTPQGGAVTDDNLYGLSLTTVDRYTCRSKYEDREVTNTMLCFGLPREGGRD 152
G GGA + + L + V TC Y R +MLC GL R GG D
Sbjct: 379 GRLSSGGA-SPNVLMQAQVPLVSGQTCSQAYPGR-THYSMLCAGL-RHGGVD 427
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 6/125 (4%)
Frame = -2
Query: 427 DISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGAVTDDNLYGLSLT 248
DI+++ L+ I IQ + P L GWG T V L L +
Sbjct: 80 DIALLHLAKPIQFSDRIQPICLPQDDTEFPAGKMCYLTGWGETVLDSGVFSPTLKQLKVP 139
Query: 247 TVDRYTCRSKYEDREVTN-TMLCFGLPREGGRDFFTRDVGAPVFYQN-----ALISLISF 86
V++ C S + + +C G +GG+D D G P+ Q L L+S+
Sbjct: 140 LVNKSVCNSNNSYSGIIHEQFMCAGY-NQGGQDGCLGDSGGPLSCQTESGDWVLTGLMSW 198
Query: 85 GESDA 71
GE A
Sbjct: 199 GEKCA 203
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 39.5 bits (88), Expect = 0.003
Identities = 53/247 (21%), Positives = 102/247 (41%), Gaps = 22/247 (8%)
Frame = -2
Query: 691 GTRVPISDRPSLAQVEVALGNVWIQQCAGAVLTNFHILSVATCF-------SGAFYRPDT 533
G + D P A ++ L + + C G+++ +++ A C +G
Sbjct: 436 GQTAKVEDWPWQAGLKKGLDDTIV--CGGSLINREWVVTAAHCIDRNNPSRTGCVVPDPP 493
Query: 532 RRIRLG-SDI-RNEGGLIV-NVLLANNHHSFDPTNMASDISVVRLSSAITLGGNIQQASV 362
R+ LG SD+ ++EG I +V H + + +D++++RL + IT +
Sbjct: 494 IRVILGESDVTKHEGNEIHRDVAQICIHPDYHEIKLTNDLALIRLRTPITTF--TKHVRP 551
Query: 361 ILQGVHVPPRLSV----ELIGWGNTPQGGAVTDDNLYGLSLTTVDRYTCRSKYEDREVTN 194
+ P L+V + G+G + ++ L ++ + CR+ Y + +
Sbjct: 552 VCLPTSATPDLAVGTNCTVTGYGRVGENEDLSTQ-LRHATIPVLSVSECRANYSGHTIND 610
Query: 193 TMLCFGLPREGGR-DFFTRDVGAPVFYQNALIS-------LISFGESDANNEYPLVGTGI 38
++C G EGG+ D D G P ++ ++ +S+G A P + T I
Sbjct: 611 KVICAGY--EGGKIDSCKGDSGGPFVCKDPRVTSRFILHGAVSWGVGCARKGQPGIYTDI 668
Query: 37 SDYTNWI 17
Y NWI
Sbjct: 669 KKYLNWI 675
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 37.1 bits (82), Expect = 0.016
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 5/151 (3%)
Frame = -2
Query: 613 CAGAVLTNFHILSVATCFSGAFYRPDTRRIRLGS-DIRNEGGL--IVNVLLANNHHSFDP 443
C G V++ + +L+ A C R ++ +G + N G ++ V +H ++
Sbjct: 574 CGGNVISPWWVLTAAHCVQDE--RASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYSY 631
Query: 442 TNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGAVTDDNLY 263
+ D ++++L+ + +Q V L P + GWG+T G+ + + L
Sbjct: 632 NTVDYDYALLKLTRPLNFTQYVQP--VCLPDSDFPAGTLCYVTGWGSTNYRGSPSPNYLQ 689
Query: 262 GLSLTTVDRYTCRSKY--EDREVTNTMLCFG 176
+ L V+ C + Y R++T M C G
Sbjct: 690 EVGLPLVNHSQCHATYLTASRKITPRMRCAG 720
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 36.3 bits (80), Expect = 0.027
Identities = 46/201 (22%), Positives = 81/201 (40%), Gaps = 14/201 (6%)
Frame = -2
Query: 631 NVWIQQCAGAVLTNFHILSVATCFSGAFYRPDTR-RIRLGS-DIRNEGGL--IVNVLLAN 464
N+ C G+++ + IL+ + CF + T+ IRLG D R G I+
Sbjct: 9 NLTTHYCGGSLIDPYWILTSSHCF-WTYNNISTQFEIRLGEHDERRIEGYEEIIQGDQLY 67
Query: 463 NHHSFDPTNMAS----DISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTP 296
H ++ S D+++++L + + ++ + GWG T
Sbjct: 68 IHPGLVVGDLISPGDYDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWGKTA 127
Query: 295 QGGAVTDDNLYGLSLTTVDRYTCRSKYE-DREVTNTMLCFGLPREGGRDFFTRDVGAPVF 119
+G + L L + V + C + + + + C G P +GGRD D G P+
Sbjct: 128 EGSPYSPV-LNELEVDIVSKEVCNANDSYNGTINDRYFCAGFP-QGGRDSCGGDSGGPLV 185
Query: 118 YQNA-----LISLISFGESDA 71
NA L ++S+GE A
Sbjct: 186 CSNADGQYVLRGVVSWGEGCA 206
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 35.9 bits (79), Expect = 0.036
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Frame = -2
Query: 427 DISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGAVTDDNLYGLSLT 248
DI+++ L + ++Q ++ + + + GWG+T G+ + L + +
Sbjct: 128 DIALIELDRPVVFNFHVQPICIMRPNISFKWNTACFISGWGHTRWNGS-QPNVLNFVMVP 186
Query: 247 TVDRYTCRSKYE-DREVTNTMLCFGLPREGGRDFFTRDVGAPVFYQNA----LISLISFG 83
V TC + + T LC G R G +D D G P+ Q + L+S+G
Sbjct: 187 LVSHATCNKPLSYNGTIHETALCAGYER-GLKDSCEFDSGGPLACQKGGRYYAVGLVSWG 245
Query: 82 ESDANNEYPLVGTGISDYTNWII 14
+ A V + ++ T W++
Sbjct: 246 DECARAHKFGVYSRMAKLTPWMV 268
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 35.5 bits (78), Expect = 0.047
Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 4/151 (2%)
Frame = -2
Query: 457 HSFDPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGAVT 278
H TN+ +D+++++L+ +TLG + A + + V + + T
Sbjct: 585 HEGYTTNLLNDVALIQLARPVTLGSKVNTACLPTGEIAVGSKCYI------------TGT 632
Query: 277 DDNLYGLSLTTVDRYTCRSKYEDREVTNTMLCFGLPREGGRDFFTRDVGAPVFYQNA--- 107
L L + CR +Y + C G R G D G P+ + +
Sbjct: 633 QGTLQQAMLPIAEHSLCRKQYRVDRTAHP--CAGEARVGAAGGCNGDSGGPLVCEQSGVW 690
Query: 106 -LISLISFGESDANNEYPLVGTGISDYTNWI 17
L +S+G +Y V T +S Y WI
Sbjct: 691 VLHGAVSYGARWCPTDYYTVFTRVSSYVAWI 721
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 35.1 bits (77), Expect = 0.063
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 20/219 (9%)
Frame = -2
Query: 613 CAGAVLTNFHILSVATCFSGAFYRPDTRRIRLGSDIRN--EGG-LIVNVLLANNHHSF-D 446
C G+++ +L+ A C ++ LG R EG +++V + H+++ +
Sbjct: 58 CGGSLVAPGWVLTAAHCILSD--DASKYKVVLGDVDRKKIEGSEQMIDVAMVIKHYAYGN 115
Query: 445 PTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGAVTDDNL 266
P A+D+++++L T + + HV + GWG + G T + L
Sbjct: 116 PVPNANDVALLKLRDYPTKTDFVNTVCLPQYMDHVEIGKDCFITGWGRSYYPGP-TANKL 174
Query: 265 YGLSLTTVDRYTCRSKYEDRE----------VTNTMLCFGLPREGGRDFFTRDVGAPVFY 116
L V C ++ + VT TMLC G + G++ D G P
Sbjct: 175 QQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDAGKTGKNGCNGDSGGPFVC 234
Query: 115 QN-----ALISLISFGESDANN-EYPLVGTGISDYTNWI 17
+N L ++S+G+ + ++ + V +S +WI
Sbjct: 235 RNTAGQWVLQGVVSWGDPECSSANHFSVFARVSVLRHWI 273
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 34.7 bits (76), Expect = 0.083
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Frame = -2
Query: 613 CAGAVLTNFHILSVATCFSGAFYRPDTRRIRLGSDIRNEGGL----------IVNVLLAN 464
C+G +++ H+++ A CF R D +RLG+ I G L + V +
Sbjct: 1114 CSGVLISARHVITAAHCFD-RIIRTDQIIVRLGAYIARSGRLDWGMGSRWEQEIAVAAIH 1172
Query: 463 NHHSFD-PTNMASDISVVRLSSAITLGGNI 377
H S+ PT A+DI+V++L+ L +
Sbjct: 1173 KHPSYQAPTRWANDIAVLKLARPAILNKRV 1202
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = -2
Query: 463 NHHSFDPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGA 284
+H ++ + D ++++L+ + +Q V L P + GWG+T G+
Sbjct: 376 SHANYSYNTVDYDYALLKLTRPLNFTQYVQP--VCLPDSDFPAGTLCYVTGWGSTNYRGS 433
Query: 283 VTDDNLYGLSLTTVDRYTCRSKY--EDREVTNTMLCFG 176
+ + L + L V+ C + Y R++T M C G
Sbjct: 434 PSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG 471
>SB_39703| Best HMM Match : PHD (HMM E-Value=9.3e-12)
Length = 886
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 353 RSTCAPSLKRRAHRLGKHSARRCSYRR*PIRSEPHHSRPIHL*EQIRRQGSY 198
+S C P L + ++ KH C Y I+S HH + +H QI+R G +
Sbjct: 227 QSICYPHLFKINNKATKHG---CKYEEQAIKSYEHHMKSLHTNFQIKRCGLF 275
>SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17)
Length = 1828
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 353 RSTCAPSLKRRAHRLGKHSARRCSYRR*PIRSEPHHSRPIHL*EQIRRQGSY 198
+S C P L + ++ KH C Y I+S HH + +H QI+R G +
Sbjct: 658 QSICYPHLFKINNKATKHG---CKYEEQAIKSYEHHMKSLHTNFQIKRCGLF 706
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 353 RSTCAPSLKRRAHRLGKHSARRCSYRR*PIRSEPHHSRPIHL*EQIRRQGSY 198
+S C P L + ++ KH C Y I+S HH + +H QI+R G +
Sbjct: 1392 QSICYPHLFKINNKATKHG---CKYEEQAIKSYEHHMKSLHTNFQIKRCGLF 1440
>SB_20294| Best HMM Match : Orthopox_F6 (HMM E-Value=8.1)
Length = 242
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 353 RSTCAPSLKRRAHRLGKHSARRCSYRR*PIRSEPHHSRPIHL*EQIRRQGSY 198
+S C P L + ++ KH C Y I+S HH + +H QI+R G +
Sbjct: 157 QSICYPHLFKINNKATKHG---CKYEEQAIKSYEHHMKSLHTNFQIKRCGLF 205
>SB_46020| Best HMM Match : PHD (HMM E-Value=9.3e-12)
Length = 824
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 353 RSTCAPSLKRRAHRLGKHSARRCSYRR*PIRSEPHHSRPIHL*EQIRRQGSY 198
+S C P L + ++ KH C Y I+S HH + +H QI+R G +
Sbjct: 268 QSICYPHLFKINNKATKHG---CKYEEQAIKSYEHHMKSLHTNFQIKRCGLF 316
>SB_45996| Best HMM Match : VWA (HMM E-Value=2.6e-12)
Length = 595
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -1
Query: 371 SLSHPSRSTCAPSLKRRAHRLGKHSARRCSYRR*PIRSEPHHSRPIHL*EQIRRQGSY 198
+L+ PS++ ++ K + C Y I+S HH + +H QI+R G +
Sbjct: 521 NLAQPSQNLIQSICYPHLFKINKATKHGCKYEEQAIKSYEHHMKSLHTNFQIKRCGLF 578
>SB_35444| Best HMM Match : Hist_deacetyl (HMM E-Value=1.90577e-43)
Length = 636
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 229 CRSKYEDREVTNTMLCF-GLPREGGRDFFTRDVGAPVFYQNALISLISFGESDANNEYPL 53
CR+K ED +T T+ CF LP G D + +FY + + IS D +P
Sbjct: 370 CRTKAEDGTIT-TLKCFSSLPCGGMGDIHHGNGTQQMFYDDPHVLYISLHRHDDGTFFP- 427
Query: 52 VGTG 41
GTG
Sbjct: 428 -GTG 430
>SB_12340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = -1
Query: 404 FSNHPWW*YTTSLSHPSRSTCAPSLKRRAHRLGKHSARRCSYRR*PIRSEPHHSRP 237
F NHP+ +HP R+ +L R H L H R +R P R+ P + P
Sbjct: 164 FRNHPF------RNHPFRNHSFRNLPFRNHPLRNHPLRNHPFRNHPFRNHPLRNHP 213
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -1
Query: 449 RSHEYGQRYFRCPS*FSNHPWW*YTTSLSHPSRSTCAPSLKRRAHRLGKHSARRCSYRR* 270
R+H + FR S F N P+ + +HP R+ + R H L H R +R
Sbjct: 165 RNHPFRNHPFRNHS-FRNLPFRNHPLR-NHPLRNHPFRNHPFRNHPLRNHPFRNHPFRNH 222
Query: 269 PIRSEPHHSRPI 234
P R+ P + P+
Sbjct: 223 PFRNHPFRNHPL 234
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 404 FSNHPWW*YTTSLSHPSRSTCAPSLKRRAHRLGKHSARRCSYRR*PIRSEPHHSRP 237
F NHP+ +HP R+ + R H HS R +R P+R+ P + P
Sbjct: 149 FRNHPF------RNHPLRNHPFRNHPFRNHPFRNHSFRNLPFRNHPLRNHPLRNHP 198
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = -1
Query: 404 FSNHPWW*YTTSLSHPSRSTCAPSLKRRAHRLGKHSARRCSYRR*PIRSEPHHSRPI 234
F NHP+ + +HP R+ + R H H R +R P R+ P + P+
Sbjct: 214 FRNHPFRNHPFR-NHPFRNHPLRNHPFRNHPFRNHPFRNHPFRNLPFRNHPFRNHPL 269
>SB_33601| Best HMM Match : Metallophos (HMM E-Value=6.4e-19)
Length = 675
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 439 SWDRMSDGYWQVTHSRSSRLHFVCQNRD---EYDEYRAGRRLQRNKWQQTG 582
S R GY Q+ H + + C+ RD E +YR+ RRL+R K+ G
Sbjct: 332 SRSRSCFGYRQIHHKTTGSVWPKCRPRDIDPEGVDYRSRRRLRRRKYYSKG 382
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = -2
Query: 427 DISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGAVTDDNLYGLSLT 248
DI++VRLS N+ ++ +P + + GWG+ G + L +
Sbjct: 49 DIALVRLSEPAIFDENVSPICLLPPEHKLPWGKTCIITGWGHIRWNG-TQPEALREAKVR 107
Query: 247 TVDRYTCR--SKYEDREVTNTMLCFGLPREGGRDFFTRDVGAPV 122
V + C + Y + + + LC G +EGG D D G P+
Sbjct: 108 LVPTWVCNLVNSY-NGTIHSRALCAGF-KEGGVDACQYDSGGPL 149
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 3/113 (2%)
Frame = -2
Query: 613 CAGAVLTNFHILSVATCFSGAFYRPDTRRIRLGSDIRNEGGLIVNVLLANN---HHSFDP 443
C G+++ +++ A C P + +G+ R + N H F
Sbjct: 57 CGGSLIAKDWVVTAAHCVDRN-PTPSGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSM 115
Query: 442 TNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQGGA 284
++ +DI++++L + + + G + GWG T GG+
Sbjct: 116 RHLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGS 168
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 29.5 bits (63), Expect = 3.1
Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 12/160 (7%)
Frame = -2
Query: 460 HHSFDPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNT---PQG 290
H ++ SD++++RLS TL + + +G + + GWG T G
Sbjct: 1411 HPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVGKNCYITGWGRTGYNRPG 1470
Query: 289 GAVTDDNLYGLSLTTVDRYTCRSKYED-REVTNTMLCFGLPREGGRDFFTRDVGAPVFYQ 113
+V + + + V + TC + VT+ M+C G D G P Q
Sbjct: 1471 ASVLQEAM----MPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGGPFVCQ 1526
Query: 112 NA-----LISLISFGE---SDANNEYPLVGTGISDYTNWI 17
+ + ++S+G S NEY V ++ + WI
Sbjct: 1527 GSNKRWNIQGVVSWGTRTCSSGQNEY-TVYARVAQFVPWI 1565
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 3/117 (2%)
Frame = -2
Query: 517 GSDIRNEGGLIVNVLLANNHHSFDPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVP 338
G+ R G + + H F DI+++RLS+ + L ++ + QG
Sbjct: 21 GAHYREHDGKELTISKITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLPSQGARAS 80
Query: 337 PRLSVELIGWGNTPQGG-AVTDDNLYGLSLTTVDRYTCRSKYE--DREVTNTMLCFG 176
+ + GWG + + L ++ ++ C+ K + + + +M+C G
Sbjct: 81 LGGNCFISGWGRINSSDMQLLANKLQQSRVSIIENNKCKVKNDCHYKVLDKSMVCAG 137
>SB_51704| Best HMM Match : F-box (HMM E-Value=3.3e-05)
Length = 337
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 266 IRSEPHHSRPIHL*EQIRRQGSYQYNALLW 177
+RS+P HS+ I+ + R Y Y ++W
Sbjct: 232 LRSDPRHSKVIYKVGMVMRHRRYHYGCVIW 261
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 29.1 bits (62), Expect = 4.1
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Frame = -2
Query: 313 GWGNTPQGGAVT-DDNLYGLSLTTVDRYTCRSKYEDREVTNTMLCFGLPREGGRDFFTRD 137
GWG T D L + V+ TCRS N+M+C G G D
Sbjct: 416 GWGRISSSDQHTLADKLQQSKVPLVNYTTCRSTNGATVDENSMICAG---GAGSSACNGD 472
Query: 136 VGAPV-FYQN---ALISLISF--GESDANNEYPLVGTGISDYTNWIIENR 5
G P+ +N L + S+ E+ N + + +S Y+NWI NR
Sbjct: 473 SGGPLQCLENERWVLRGVASWVTAETCPGNTFSVYAR-VSSYSNWIESNR 521
>SB_35188| Best HMM Match : RVT_1 (HMM E-Value=2.3e-25)
Length = 467
Score = 28.7 bits (61), Expect = 5.5
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = -2
Query: 679 PISDRPSLAQVEVALGNVWIQQCAGAVLTNFHILSVATCFSGAFYRPDTRRIRLGSDI-- 506
P+S+ P +++V + +Q +++N +S+ + + F+ +T I++ +DI
Sbjct: 25 PVSNLPMVSKV---IEKAVAKQLTKHIVSNNLDVSLKSSYK-KFHSTETALIKVQNDILC 80
Query: 505 RNEGGLIVNVLLANNHHSFDPTNMASDISVVRLSSAITLGGNI 377
+GG +V +LL + SFD + I + RLS + L GN+
Sbjct: 81 AIDGGNLVLMLLLDLSASFDTVD--HSILLSRLSLSYGLTGNV 121
>SB_39498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/52 (25%), Positives = 20/52 (38%)
Frame = +1
Query: 427 RWPYSWDRMSDGYWQVTHSRSSRLHFVCQNRDEYDEYRAGRRLQRNKWQQTG 582
RWP D W + + + + + +Y AG +L R WQ G
Sbjct: 276 RWPIIADEKMARRWPIIAGEKLAIRWPIISGKKLAKYIAGEKLSRRCWQDVG 327
>SB_30177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 643
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -2
Query: 307 GNTPQGGAVTDDNLYGLSLTTVDRYTCRSKYEDREVTNTMLCFGLPREGGRDFFTRDVGA 128
G + ++TD Y +S V R S +E + + L R+G R +F++D
Sbjct: 149 GGGQESFSMTDSMSYSVSSLEVTRNPFESDHEIDSTSLASVRLCLQRQGPRSYFSQDAIV 208
Query: 127 P-VFYQNALISLISFGESDANNEY 59
P + N + ++F + +Y
Sbjct: 209 PSPWTPNRSVKHVTFSPLPPHTKY 232
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,412,987
Number of Sequences: 59808
Number of extensions: 597566
Number of successful extensions: 1404
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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