Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12l06r
(748 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 375 e-103
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 361 1e-98
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 275 6e-73
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 270 3e-71
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 211 1e-53
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 196 5e-49
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 186 7e-46
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 147 2e-34
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 124 2e-27
UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep: ... 113 3e-24
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 109 9e-23
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 103 4e-21
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 103 6e-21
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 101 2e-20
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 99 6e-20
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 98 2e-19
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 96 7e-19
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 91 3e-17
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 90 5e-17
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 87 3e-16
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 87 6e-16
UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S riboso... 85 2e-15
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 85 2e-15
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 80 7e-14
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 77 6e-13
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 67 5e-10
UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-... 34 3.2
UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2; ... 33 5.6
UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4; ... 33 5.6
UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11; Bacteri... 33 7.5
UniRef50_Q8GPX1 Cluster: Putative uncharacterized protein ORF SG... 33 9.9
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 375 bits (922), Expect = e-103
Identities = 172/236 (72%), Positives = 199/236 (84%)
Frame = -2
Query: 747 HTQMKLLKQRXKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXX 568
HTQM+LL R KKAH+MEIQ+NGGT+ +K+ WARE LE+ +PV+ VF QDEMID I
Sbjct: 165 HTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTK 224
Query: 567 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 388
TSRWHTKKLPRKTH+GLRKVACIGAWHP+RV+F+VARAGQKGYHHRTE+NKKI
Sbjct: 225 GKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKI 284
Query: 387 YRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 208
Y+IGQG KDGK+IKNNAST+YDLS+KSI P+GGF HYGEV NDFVM+KGC +G KKR+
Sbjct: 285 YKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRV 344
Query: 207 ITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 40
+TLRKSL V TKR ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LKKDRI +E
Sbjct: 345 LTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 361 bits (887), Expect = 1e-98
Identities = 166/235 (70%), Positives = 190/235 (80%)
Frame = -2
Query: 747 HTQMKLLKQRXKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXX 568
HTQMKLL R KKAHIMEIQLNGGT+ +KV WA+ LEK +PV SVF+Q E+ID I
Sbjct: 165 HTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTK 224
Query: 567 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 388
TSRWHTKKLPRKTHKGLRKVACIGAWHP+RV ++ARAGQKGYHHRTE+NKKI
Sbjct: 225 GRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKI 284
Query: 387 YRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 208
+RIG+G H +DGK++KNNAST YD++ KSITP+GGFPHYGEVNNDFVM+KGC G KKR+
Sbjct: 285 FRIGRGPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRV 344
Query: 207 ITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 43
ITLRKSL VH R A+E I LKFIDT+SKFGHGRFQT +K AFMG KK +E
Sbjct: 345 ITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQKKHLEKE 399
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 275 bits (675), Expect = 6e-73
Identities = 132/239 (55%), Positives = 163/239 (68%), Gaps = 3/239 (1%)
Frame = -2
Query: 747 HTQMKLLKQRX---KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIX 577
HTQ++ L+ KKAH+ EIQ+NGGTI K++ A+ LEK + +DSVF Q E D
Sbjct: 216 HTQLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCA 275
Query: 576 XXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMN 397
RW LPRKTH+GLRKVACIGAWHPSRV +TVARAGQ GYHHRT +N
Sbjct: 276 VTKGHGFTGVVKRWGVACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLN 335
Query: 396 KKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 217
KKIY++G+ + + N A+T YDL+ K+ITPMGGF YG V ND+VM+KG GP+
Sbjct: 336 KKIYQLGRAVSME-----PNQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPR 390
Query: 216 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 40
+R+ITLR+ + T R EKI LKFIDTSSK GHGRFQT +K+ + G LKKDRIR E
Sbjct: 391 RRVITLRRPMAPQTSRKLTEKITLKFIDTSSKIGHGRFQTKKEKSQWYGPLKKDRIRRE 449
>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rpl-3 - Caenorhabditis elegans
Length = 353
Score = 270 bits (661), Expect = 3e-71
Identities = 128/190 (67%), Positives = 149/190 (78%)
Frame = -2
Query: 612 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 433
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 432 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 253
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 252 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 73
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 72 GTLKKDRIRE 43
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
B) (TARBP-B). - Bos Taurus
Length = 340
Score = 211 bits (516), Expect = 1e-53
Identities = 114/230 (49%), Positives = 149/230 (64%)
Frame = -2
Query: 744 TQMKLLKQRXKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXX 565
TQM LL KKAH+ E Q+N G + K+ WA + LE+ +PV+ +F + I
Sbjct: 123 TQMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHKKLEQQVPVNHIFRVRRLF-VIGTTKG 180
Query: 564 XXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIY 385
+S W+TKK+P KTH+ + ACI W +VA A QKG HH T +NKKIY
Sbjct: 181 KHYKGISSHWYTKKVPWKTHQEFHEAACI--WD----GLSVAWARQKGCHHCT-INKKIY 233
Query: 384 RIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRII 205
+IGQG K+GK+IKNNAST+Y KSI+P+GG H G+V NDFVM+K C +G KKR++
Sbjct: 234 KIGQGYLIKNGKIIKNNASTDYT---KSISPLGGCIHCGKVTNDFVMLKDCLVGTKKRVL 290
Query: 204 TLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 55
+L KSL + TK+ L+K+N KFIDT+SKFGHG FQ +K FMG LKKD
Sbjct: 291 SLCKSLLMRTKQQTLQKVNFKFIDTTSKFGHGCFQIVGEKKGFMGPLKKD 340
>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
Rattus norvegicus
Length = 380
Score = 196 bits (478), Expect = 5e-49
Identities = 115/236 (48%), Positives = 145/236 (61%)
Frame = -2
Query: 747 HTQMKLLKQRXKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXX 568
HTQM LL KKAH+MEIQ+ G + W RE + QDE+ID I
Sbjct: 159 HTQMCLLSLHQKKAHLMEIQVMGHC---GLSW-REAVN----------QDEIIDVIKETK 204
Query: 567 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 388
T + P + +G K+ C+GAWHP+RV+F+VA+ GQKGYHH + NKKI
Sbjct: 205 GNGYKGVTRVDIQRNCPERPIEGCPKL-CVGAWHPARVTFSVAQVGQKGYHHNGD-NKKI 262
Query: 387 YRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 208
+IGQG KDGK+IKNNA TEY LS+KSI +GGF HYGEV NDF+ +KGC + KK
Sbjct: 263 CKIGQGYLIKDGKLIKNNAPTEYHLSDKSINLLGGFVHYGEVTNDFIRLKGCAVRTKKH- 321
Query: 207 ITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 40
+T+ K L V T + AL+KI+ K DT+ K GHG FQT K AF+G LKK+ EE
Sbjct: 322 LTICKYLLVQTIQWALKKIDPKLNDTTYKVGHGCFQTTEGKRAFIGPLKKECTAEE 377
>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
natans|Rep: Ribosomal protein L3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 370
Score = 186 bits (452), Expect = 7e-46
Identities = 95/214 (44%), Positives = 136/214 (63%)
Frame = -2
Query: 714 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 535
KK + E + GG+ + K+++ + K I ++S+F ++++ID I SRW
Sbjct: 158 KKKYFFETDIIGGSPKMKLEFWLKLNNKKIYINSIFHENDIIDAIGITKGHGTKGVVSRW 217
Query: 534 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 355
+LPRKTH+GLRKVACIG W PSRV++T++RAGQKGYH RT NKKIY+IG +++
Sbjct: 218 GITRLPRKTHRGLRKVACIGPWTPSRVAWTISRAGQKGYHKRTLFNKKIYKIGS---EEN 274
Query: 354 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 175
N+ S D KS+ MGGF +G +NND+++IKG G KR I LRK+++
Sbjct: 275 FSYYSNSLS---DSIVKSVNCMGGFKKFGFINNDYLIIKGSMTGSSKRPILLRKNIKNKI 331
Query: 174 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 73
EKI LK++DTSSK GHGR+++ ADK + M
Sbjct: 332 SSVITEKIILKYVDTSSKRGHGRYESSADKFSKM 365
>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L3P -
Pyrococcus furiosus
Length = 365
Score = 147 bits (357), Expect = 2e-34
Identities = 80/208 (38%), Positives = 118/208 (56%)
Frame = -2
Query: 744 TQMKLLKQRXKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXX 565
TQ ++K + KK +ME + G ++E+K + +E L K + V V + E++D I
Sbjct: 169 TQPWVIKLK-KKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKG 227
Query: 564 XXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIY 385
RW K K KG RKV IG WHP+RV +TV AGQ G+HHRTE+NK++
Sbjct: 228 KGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLI 287
Query: 384 RIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRII 205
IG+ +GK +K + +TE + ITP GGFPHYG V +DF+MI G G KRII
Sbjct: 288 AIGE-----NGK-LKLDENTEIE-----ITPKGGFPHYGIVRSDFMMIAGSVPGAIKRII 336
Query: 204 TLRKSLRVHTKRAALEKINLKFIDTSSK 121
+R ++R K+ +++ + ++ SK
Sbjct: 337 RVRPAIRPPKKKPPVQRPQITYVSVESK 364
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 124 bits (300), Expect = 2e-27
Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 2/213 (0%)
Frame = -2
Query: 747 HTQMKLLKQRXKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXX 568
HT KL KK I+EI++ G IE+++ +A+E L K + + VF + E++D I
Sbjct: 144 HTNPKLTCLPKKKPEILEIRIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTK 203
Query: 567 XXXXXXXTSRWHTK-KLPRKTHKGL-RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNK 394
RW K + + KG+ R V IG W P V ++V GQ GYH RTE NK
Sbjct: 204 GKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNK 263
Query: 393 KIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKK 214
+I +IG NN ITP GGF HYG + N++V++KG GP K
Sbjct: 264 RILKIG------------NNGD--------EITPKGGFLHYGVIRNNYVVLKGSVQGPAK 303
Query: 213 RIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 115
R+I LR+++R + ++ + +I T+SK G
Sbjct: 304 RLIVLRRAIR--PQEPLIKVPEITYISTTSKQG 334
>UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep:
Ribosomal protein L3 - Mus musculus (Mouse)
Length = 67
Score = 113 bits (273), Expect = 3e-24
Identities = 50/67 (74%), Positives = 59/67 (88%)
Frame = -2
Query: 354 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 175
GK+IKNNAST+YDLS+KSI P+GGF HYGEV NDF+M+KGC +G KKR++TLRKSL V T
Sbjct: 1 GKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQT 60
Query: 174 KRAALEK 154
KR ALEK
Sbjct: 61 KRRALEK 67
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 109 bits (261), Expect = 9e-23
Identities = 70/211 (33%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Frame = -2
Query: 744 TQMKLLKQRXKKAH-IMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXX 568
TQ L+K K IME+ L GG K++WA E L I +D V+ + +D +
Sbjct: 169 TQPALVKSVPSKTPVIMEVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELDVVGITK 228
Query: 567 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 388
R+ K L K K R++ +G + V T+ +AGQ GYH RTE+NK+I
Sbjct: 229 GKGWQGVIKRFGVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQMGYHKRTELNKRI 288
Query: 387 YRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 208
RI + E +TP GGF HYGEV N +++++G GP KR+
Sbjct: 289 LRIS-------------------NPGESDVTPAGGFLHYGEVTNPYMVLEGSLPGPAKRL 329
Query: 207 ITLRKSLRVHTKRAALEKINLKFIDTSSKFG 115
+ R +R HT + ++L ++ TSSK G
Sbjct: 330 LRFRDPVRPHTN---VFDVDLTYVSTSSKQG 357
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 103 bits (248), Expect = 4e-21
Identities = 68/200 (34%), Positives = 96/200 (48%)
Frame = -2
Query: 714 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 535
K IME+ L GG + ++ WA E L + + ++ VF ID I R+
Sbjct: 160 KSPEIMEMGLTGGDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGVTKGYGNQGVVRRF 219
Query: 534 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 355
K L K K R++ +G + V T+ +AGQ GYH RTE NK+I RI
Sbjct: 220 GVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQTGYHQRTEYNKRILRI-------- 271
Query: 354 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 175
A E E ITP GGF HYGEV N +++I+G GP KR+I R + R
Sbjct: 272 -------AGEE----ESQITPAGGFLHYGEVKNHYMIIQGSLPGPAKRLIRFRDAAR--- 317
Query: 174 KRAALEKINLKFIDTSSKFG 115
R +++ ++ T+SK G
Sbjct: 318 PRREQPPVDITYVSTASKQG 337
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 103 bits (246), Expect = 6e-21
Identities = 66/189 (34%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Frame = -2
Query: 744 TQMKLLKQRXKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXX 565
TQ K KK +ME ++ G + ++ ++A E L + I VF + E++D
Sbjct: 151 TQPKKAGVPKKKPDVMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKG 210
Query: 564 XXXXXXTSRWHTKKLPRKTHKGL--RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 391
RW RKT + R + IG PSRV +TV AGQ GYH RTE NK+
Sbjct: 211 KGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQRTEHNKR 270
Query: 390 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 211
I +IG+ DG + +TP GGF +YG V D++MI G GPKKR
Sbjct: 271 ILKIGE-----DG---------------EEVTPRGGFVNYGVVRGDYIMIHGTVPGPKKR 310
Query: 210 IITLRKSLR 184
+I +R ++R
Sbjct: 311 LIRVRPAVR 319
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 101 bits (242), Expect = 2e-20
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Frame = -2
Query: 714 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 535
K +ME ++ GG + + ++A+ + K + + VFA E++D RW
Sbjct: 158 KVPELMENRIAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVRW 217
Query: 534 HTKKLPRKTHKGLRK--VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHK 361
RK + +K V +G W+P R+ + V + GQ GYH RTE NK+I ++G
Sbjct: 218 GIATQKRKHARTGKKRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRILKMG----- 272
Query: 360 KDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRV 181
D +E+ ITP GGF HYG + ND++M+KG GP KR++ +R ++R
Sbjct: 273 --------------DKAEE-ITPAGGFLHYGLIRNDYIMLKGSIPGPVKRMVRIRPAVR- 316
Query: 180 HTKRAALEKINLKFIDTSSKFG 115
K + + ++ T SK G
Sbjct: 317 -PKNMPKQAPEITYLSTQSKMG 337
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 99 bits (238), Expect = 6e-20
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Frame = -2
Query: 714 KKAHIMEIQLNGG-TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 538
KK I E+++ GG +++++ ++A HL K I + + +D + R
Sbjct: 150 KKPEIFELRIGGGNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQR 209
Query: 537 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 358
+ K LPRK K R + +G WHP V TV +AGQ GY RT N ++ + +G
Sbjct: 210 FGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSKG---- 265
Query: 357 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 178
+A T I GGF HYG V ND+V++ G GP KR+I +R R
Sbjct: 266 ------EDADT--------INVRGGFLHYGLVKNDYVLLFGSVPGPAKRLIKMRDPAR-- 309
Query: 177 TKRAALEKINLKFIDTSSKFG 115
K ++ + L +I SK G
Sbjct: 310 QKVPDIDNVKLDYISLESKQG 330
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 98.3 bits (234), Expect = 2e-19
Identities = 58/177 (32%), Positives = 86/177 (48%)
Frame = -2
Query: 714 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 535
KK +I E ++GG I + +E L K I +D +F +D RW
Sbjct: 156 KKPYIFEASVSGGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRW 215
Query: 534 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 355
+ KK K+ K +R+V +G P V +TV RAGQ G+H R E +K+I +G
Sbjct: 216 NVKKKQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFHQRVEYDKRIMIMG------- 268
Query: 354 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 184
+T+ D + I P GGF H+G V DF+++KG G +R+I LR +R
Sbjct: 269 --------NTDDD--KLKINPDGGFKHFGLVKGDFIVLKGSVPGAYRRLIKLRSQIR 315
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 96.3 bits (229), Expect = 7e-19
Identities = 59/198 (29%), Positives = 97/198 (48%)
Frame = -2
Query: 714 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 535
K I +I + G + K+++A L K + ++ VF + + +D I R+
Sbjct: 148 KTPEIFDIPIGGSDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKRF 207
Query: 534 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 355
H + K+ KG+RKV IG+ P R+ TV GQ GYH RTE NK I +IG+ ++ +
Sbjct: 208 HVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIGEPLNVE- 266
Query: 354 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 175
GG+ YG+V +++KG GP+KR+I LR+++R
Sbjct: 267 ----------------------GGWVRYGQVIGPTILLKGSVPGPRKRLIILREAIRPPR 304
Query: 174 KRAALEKINLKFIDTSSK 121
K+ +E +++I S K
Sbjct: 305 KQEKVE--GIEYISLSPK 320
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 91.1 bits (216), Expect = 3e-17
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 4/204 (1%)
Frame = -2
Query: 714 KKAHIMEIQLNGGTIEDKVKWAREHLEKP--IPVDSVFAQDEMIDCIXXXXXXXXXXXTS 541
K +ME ++ GGT+ D++++A + +E VF E D
Sbjct: 155 KNPDVMETRVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITKGKGTQGPVK 214
Query: 540 RWHTKKLPRK-THKGLRK-VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGI 367
RW +K K +G R+ + +G W+PSRV TV + GQ GYH RTE+NK++ I G
Sbjct: 215 RWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDG- 273
Query: 366 HKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSL 187
TP GGFP+YGEV+ + ++KG GP++R++ R ++
Sbjct: 274 --------------------DEPTPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVRFRPAV 313
Query: 186 RVHTKRAALEKINLKFIDTSSKFG 115
R + + L+ ++++ T+S G
Sbjct: 314 RPN-ESPRLDP-EVRYVSTASNQG 335
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 90.2 bits (214), Expect = 5e-17
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Frame = -2
Query: 714 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 535
KK I+EI++ GGT+ +++ +A + L + VD VF + + ID I R+
Sbjct: 216 KKPEIIEIKIGGGTLSERIDYAEKLLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKRF 275
Query: 534 HTKKLPR--KTHKGLRKVACIGAWHPSRVSFT-VARAGQKGYHHRTEMNKKIYRIGQGIH 364
K+LPR K KG RK IG+ P + + + GQ G+H RTE NK+I +IG
Sbjct: 276 GVKELPRWHKHRKGSRK---IGSRSPGFGTMSETPQPGQMGFHRRTEYNKRIIKIG---- 328
Query: 363 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 184
++ +TP GGF YG V ++M+ G +GP+KR++ LR +R
Sbjct: 329 ----------------INGWEVTPKGGFLGYGIVYGPYIMLHGSIIGPRKRLLVLRHPIR 372
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 87.4 bits (207), Expect = 3e-16
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Frame = -2
Query: 744 TQMKLLKQRXKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXX 565
TQ +L KK ++EI + GG E + A E L K + + VF + + ID I
Sbjct: 144 TQPRLSGLGKKKPELIEIAV-GGPPEKALSLALEKLGKDLTISDVFKEGDYIDVIAVTKG 202
Query: 564 XXXXXXTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 391
R+ +++PR K KG ++ +G P+ + F GQ G+H RTE NK+
Sbjct: 203 KGFQGSVKRFGVEEMPRWHKHRKGHSRIGSVGPQKPA-IMFYTPFPGQLGFHQRTEYNKR 261
Query: 390 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 211
I ++G D + S K I P GG+PHYG V + F++++G G KR
Sbjct: 262 ILKVG------DAE------------SLKEINPPGGWPHYGLVRSQFIIVEGSVPGAVKR 303
Query: 210 IITLRKSLR 184
++ LR ++R
Sbjct: 304 LVRLRHAIR 312
>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
symbiosum
Length = 328
Score = 86.6 bits (205), Expect = 6e-16
Identities = 50/188 (26%), Positives = 87/188 (46%)
Frame = -2
Query: 714 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 535
K+ +I E + GG+++++ + ++ L K + V +D R
Sbjct: 154 KRPYIFEAPVRGGSMKERFAYLKDLLGKTVKASDVLEPGAGVDVAAITKGKGWQGVIQRM 213
Query: 534 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 355
K+ K+ K +R++ +G P V +TV RAGQ G+H R E NK+I +G
Sbjct: 214 GAKRKQHKSRKTVRELGSLGPISPQNVMYTVPRAGQMGFHQRIEYNKRIMAVGSA----- 268
Query: 354 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 175
G+ + +I P GG+ H+G V D++++KG G +R++ LR +R
Sbjct: 269 GE-------------DDAINPSGGYKHFGMVKGDYIVLKGSVPGTYRRLVKLRAQIRNAP 315
Query: 174 KRAALEKI 151
KR + I
Sbjct: 316 KRTSKPNI 323
>UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S ribosomal
protein L3 (L4); n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L3 (L4) - Macaca
mulatta
Length = 153
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = -2
Query: 228 MGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRI 49
+G KK+++TL KS V TK ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LKKD+
Sbjct: 88 VGTKKQVLTLCKSSLVQTKWRALEKIDLKFIDTTSKFGHGRFQTIGEKKAFMGPLKKDQT 147
Query: 48 REE 40
+E
Sbjct: 148 AKE 150
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 84.6 bits (200), Expect = 2e-15
Identities = 62/190 (32%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Frame = -2
Query: 744 TQMKLLKQRXKKA-HIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXX 568
TQ + + KKA ++EIQ+ GG + ++ +A L K I + VF + ++ID +
Sbjct: 163 TQPRKIPSLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTK 222
Query: 567 XXXXXXXTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNK 394
R+ +LPR K KG RK+ G S+T + GQ G+H RTE NK
Sbjct: 223 GKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNK 280
Query: 393 KIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKK 214
+I +IG K I P GGF YG V N +V+++G +G KK
Sbjct: 281 RIIKIGD--------------------EPKEINPAGGFVRYGIVRNTYVLLEGSILGSKK 320
Query: 213 RIITLRKSLR 184
R I LR+ +R
Sbjct: 321 RPIFLREPVR 330
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 79.8 bits (188), Expect = 7e-14
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 6/206 (2%)
Frame = -2
Query: 714 KKAHIMEIQLNGGTIEDKV-KWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 538
KK ++EI++ G + K+ +A++ L I V+ VF + +++D I R
Sbjct: 161 KKPDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKR 220
Query: 537 WHTKKLPR--KTHKGLRKVACIGAWHPSRVSF-TVARAGQKGYHHRTEMNKKIYRIGQGI 367
W K+LPR K KG R+ IGA R +F +AGQ G+H RTE NK+I I
Sbjct: 221 WGVKELPRWHKHRKGSRR---IGARSHGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDG 277
Query: 366 HKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSL 187
+K +TP GGF YG V + FVM+ G G KR I +R ++
Sbjct: 278 YK--------------------VTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVMRWAI 317
Query: 186 RVHT--KRAALEKINLKFIDTSSKFG 115
R + + K + +I +SK G
Sbjct: 318 RPPEWYLKLGVRKPEITYISLASKQG 343
>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 173
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/98 (37%), Positives = 56/98 (57%)
Frame = +1
Query: 412 VMITFLTSTSYSERHPRRMPSSNAGNFPKXXXXXXXXXXXXPTRSDTFVSFALGDTNAVN 591
+++T LTS+ + MPS+N N + P+ DT + GD+N +N
Sbjct: 1 MVVTVLTSSGNGPVNVSWMPSTNTSNLSQTSVGLSWQFLGTPSVGDTLETVTFGDSNDIN 60
Query: 592 HFILGKHRIDRDRFLQMFSGPFHFVLDGTTVKLDFHNV 705
HFIL ++R++R+ F ++F GP +FV DGTTV LDF V
Sbjct: 61 HFILFENRVNRNFFFKVFFGPVNFVGDGTTVDLDFSQV 98
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 66.9 bits (156), Expect = 5e-10
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Frame = -2
Query: 714 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 535
K I+E+++ G +E +++A+ L + + V+ V + +D I R+
Sbjct: 180 KAPDILEVKVGGSPVE-ALEYAKGKLGQLVDVEEVIEAGKFVDVIGVTKGKGFQGVIKRF 238
Query: 534 HTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHK 361
K+LP+ K KG R+V +W S+ V + GQ GYH RT+ NK++ I K
Sbjct: 239 GVKELPKWHKHRKGSRRVGA-RSWGKGTSSY-VPQPGQMGYHRRTDYNKRVLMISDDPSK 296
Query: 360 KDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 184
I GG+ HYG V + +V++KG GP KR I +R +R
Sbjct: 297 --------------------INVEGGWLHYGLVKSKYVVLKGSVFGPPKRPIIMRLPVR 335
>UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1482
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +1
Query: 199 KSNDTLFRSHAATLDHHKVVVYFTIMGETSHRCNGFLRQVILSRCIVFNNFAILFVDSLS 378
+ N+ + TL H ++ YF + +SH ++I + +++NNFA +F+ L
Sbjct: 450 QKNNIKYNIKWLTLFFHSLIQYFVYLNNSSHILINHKDKIIFIKHLLYNNFAQMFLKYL- 508
Query: 379 NTIDFLVHFSTVMITFLTST 438
D V+F+ + I + S+
Sbjct: 509 --CDNYVYFTPINILSIYSS 526
>UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 685
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -2
Query: 387 YRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 208
YR G H DG + NNA++++ +K +P F GE + ++ G + K
Sbjct: 567 YRSSWGYHGDDGAIFLNNANSDFSYYKKE-SPSDDFGAKGEFGANDIVGVGLNLETGKGF 625
Query: 207 ITLRKSLR 184
+TL +LR
Sbjct: 626 VTLNGNLR 633
>UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-12
- Homo sapiens (Human)
Length = 103
Score = 34.3 bits (75), Expect = 3.2
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -3
Query: 188 CVCIQRGLH*KRSTSNSLTPRPSSVMVDSKRRLTRLHSWVH 66
C C + G +R T +SLTP PS M S+ R HSW H
Sbjct: 63 CWCRRSGGLWRRLTLSSLTPPPSLAMAASRPWRRRKHSWDH 103
>UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2;
Polaribacter|Rep: Putative uncharacterized protein -
Polaribacter dokdonensis MED152
Length = 587
Score = 33.5 bits (73), Expect = 5.6
Identities = 25/90 (27%), Positives = 39/90 (43%)
Frame = -2
Query: 429 QKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 250
++ H E++K +G+GI+ + + N S YD S GF + N F
Sbjct: 140 EQNIHLVAEISKSRPYVGEGIYVEYRLYVSENVSV-YDTSVTEAPQYNGFWNQEIKINGF 198
Query: 249 VMIKGCCMGPKKRIITLRKSLRVHTKRAAL 160
+ G G R I L+K+L + TK L
Sbjct: 199 PVKMGKYNGENYRYIVLQKALLIPTKTGRL 228
>UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4;
Arabidopsis thaliana|Rep: Putative F-box protein
At1g33020 - Arabidopsis thaliana (Mouse-ear cress)
Length = 518
Score = 33.5 bits (73), Expect = 5.6
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 614 ESTGIGFSRCSLAHFTLSSMVPPLSWISIM*AFFXRCFNSFI 739
E TG+ S+C +H +S + PL W+SI+ F + SF+
Sbjct: 474 EFTGVKTSKCDTSHLQVSCELSPLCWLSIL-LFLVMVYMSFM 514
>UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11;
Bacteria|Rep: 50S ribosomal protein L3 - Mycoplasma
mobile
Length = 297
Score = 33.1 bits (72), Expect = 7.5
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -2
Query: 267 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLK 142
++ N+ +++KG GPK + ++ +++ R A+E +N+K
Sbjct: 181 DIKNNILLVKGSVPGPKNCFLIIKSAIKNLPSREAIELVNIK 222
>UniRef50_Q8GPX1 Cluster: Putative uncharacterized protein ORF SG31;
n=2; Pseudomonadaceae|Rep: Putative uncharacterized
protein ORF SG31 - Pseudomonas aeruginosa
Length = 161
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -2
Query: 210 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAA 79
I R + + KR+AL+K+ K I+ + GHGR P+D+AA
Sbjct: 52 IAARRSTYKQLNKRSALDKVKRK-IEKAKGTGHGRTAVPSDQAA 94
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,972,926
Number of Sequences: 1657284
Number of extensions: 15935637
Number of successful extensions: 38893
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 37595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38870
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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