Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k24r
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 100 9e-22
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 89 3e-18
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 61 9e-10
AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical ... 31 0.62
U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 1.1
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.4
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 29 4.4
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 29 4.4
Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical pr... 28 7.6
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 28 7.6
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 28 7.6
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 7.6
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 100 bits (240), Expect = 9e-22
Identities = 74/223 (33%), Positives = 110/223 (49%), Gaps = 7/223 (3%)
Frame = -3
Query: 707 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGR-WRI 531
R+IGGS ++ + +P LL ++ CGG++++ +L+AAHC D + +
Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDRRPTSYSV 112
Query: 530 RVGSTFANSGGVVHNVNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINIAGANY 354
RVG + SG H V + IHP YN S D I+R + + + RPI + +
Sbjct: 113 RVGGHRSGSGSP-HRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLP--SL 169
Query: 353 NLGDNQVVWAAGWGATSLGGS-NSEQLRHVQVWTINQNACVQRYRPINRAITANMLCSGV 177
+N++ GWG+T G S ++ LR + V ++ C I R +MLC+G
Sbjct: 170 PAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGY 229
Query: 176 LDVGGRDQCQGDSGGPLLHNR----VLVGVCSWGQYCADRRLP 60
G D CQGDSGGPL+ R L GV SWG CA +P
Sbjct: 230 -SYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGIGCARPGMP 271
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 89.0 bits (211), Expect = 3e-18
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 10/242 (4%)
Frame = -3
Query: 707 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDA-TGRWRI 531
R++GG T +P AAL N CG +IL++ +++AAHC D + +
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 530 RVGSTFANS---GGVVHNVNRIIIHPNYNRRTADSDLCILR-SNSNIAYNNNVRPINIAG 363
VG N + + RI +P Y + D+ IL I +N +PI +
Sbjct: 83 VVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 362 ANYNLGDNQVVWAAGWGATSLGGSNSEQLRHVQVWTINQNACVQRYRPINRAITANMLCS 183
++ + +GWG S+G +E+L+ + IN+ CV + I +++ + C+
Sbjct: 142 KDFVYTPGRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQ-IYSSMSRSAFCA 198
Query: 182 GVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWGQYCADRRLPWC*AFAFARFTSWI 18
G L+ GG D CQGDSGGP R VL GV SWG CA ++ P A + SWI
Sbjct: 199 GYLE-GGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMV-APYLSWI 256
Query: 17 QS 12
+
Sbjct: 257 SA 258
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 60.9 bits (141), Expect = 9e-10
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 16/223 (7%)
Frame = -3
Query: 707 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 528
RIIGG++ I+ A L ++ N CG +++ +++AAHC T R +
Sbjct: 37 RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQT-RSFVY 93
Query: 527 VGSTFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 348
V N+ +V IH YN +TAD+D+ +LR +S+++ ++P+ + + L
Sbjct: 94 VREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPVCLVHDDSKL 151
Query: 347 ---GDNQVVWAAG--WGATSLGGS---NSEQLRHVQVWTINQNACVQRYR---PINRAIT 201
N VV G G S G NS+ L+ V I+ + CV+ +R ++ IT
Sbjct: 152 LKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKIT 211
Query: 200 ANMLCSGVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWG 87
+C+G G GDSGGPLL ++ V +G+ S+G
Sbjct: 212 GYQICAGAYLHG---TAPGDSGGPLLIHKSNGEYVQIGITSYG 251
>AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical
protein Y54B9A.1 protein.
Length = 129
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +2
Query: 35 GQTRTLNTRASDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 193
G+TR TR + R + RG GE HR G +R H+ T
Sbjct: 37 GETRRGETRRGETHRGETHRGETHRGETHRGETHRGETHRGETYRGETHRGET 89
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +2
Query: 35 GQTRTLNTRASDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 193
G+TR T + R + RG GE HR G HR H+ T
Sbjct: 42 GETRRGETHRGETHRGETHRGETHRGETHRGETHRGETYRGETHRGETHRGET 94
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 35 GQTRTLNTRASDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 193
G+T TR + +R + RG GE HR G HR ++ T
Sbjct: 32 GETHRGETRRGETRRGETHRGETHRGETHRGETHRGETHRGETHRGETYRGET 84
>U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical
protein B0310.4 protein.
Length = 112
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = +2
Query: 35 GQTRTLNTRASDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 193
G+T T + R + + RG GE HR G HR H+ T
Sbjct: 13 GETHRGETHRGETHRGETHRGKTHRGETHRGETHRGETHRGETHRGETHRGKT 65
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +2
Query: 35 GQTRTLNTRASDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 193
G+T T + R + RG GE HR G HR H+ T
Sbjct: 18 GETHRGETHRGETHRGKTHRGETHRGETHRGETHRGETHRGETHRGKTHRGET 70
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +2
Query: 35 GQTRTLNTRASDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 193
G+T T R + RG GE HR G+ HR H+ T
Sbjct: 23 GETHRGETHRGKTHRGETHRGETHRGETHRGETHRGETHRGKTHRGETHRGET 75
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +2
Query: 35 GQTRTLNTRASDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 193
G+T T + R + RG GE HR G HR H+ T
Sbjct: 28 GETHRGKTHRGETHRGETHRGETHRGETHRGETHRGKTHRGETHRGETHRGET 80
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +2
Query: 35 GQTRTLNTRASDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 193
G++ T + R + RG+ GE HR G HR H+ T
Sbjct: 8 GESHRGETHRGETHRGETHRGETHRGKTHRGETHRGETHRGETHRGETHRGET 60
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 435 TVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVSTT 614
T ++T +I G +V T TV GT T PT + T ++GT ++ + +TT
Sbjct: 205 TTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTTSPLNGTTTTTVPINGATT 264
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/118 (22%), Positives = 40/118 (33%), Gaps = 3/118 (2%)
Frame = +3
Query: 363 TSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPT 542
T++ T + IT EVT ++ V + T T T T TPT
Sbjct: 29 TADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPT 88
Query: 543 ACSVTVWTVSGTKDRSLVKDVSTTRXXXXXXXXCIQQSSYTGI---LVNVGRGATNNP 707
+ T T + T + +TT ++ V++G G NNP
Sbjct: 89 TTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNPNAVSLGMGDANNP 146
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Frame = +3
Query: 300 ERCSTPTSSPNNLVITKIVIGTSNINRTNVV--VISYVGITA*DAEVTVSSTSVIVGMND 473
E T++P T I TS+ T+ V++ +T+ T +ST
Sbjct: 256 ETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPT------ 309
Query: 474 NSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDV 605
+ + TP+ T T+T T S + T+S TK + D+
Sbjct: 310 TTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTTQIDI 353
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 455 NRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 348
N AD D L ++ YNNN+R N+A N NL
Sbjct: 913 NESEADYDDIYLEKQNSGKYNNNIRHGNMAFRNANL 948
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 23 KR*NGQTRTLNTRASDGQRSTVPKSR-HQRGRGCGGEDHRSHPGTGRDHRRPK 178
KR ++R+ + R +D +RST H+ R HR H G R+HR K
Sbjct: 259 KRKRSRSRSTD-RGADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHK 310
>Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical
protein T06E4.11 protein.
Length = 275
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 58 QGKRRSAQ----YCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTP 183
QG + SAQ Y +Q P + + + PP+ P +++PP + P
Sbjct: 41 QGYQDSAQVPQGYPQSQQAPQAPQGYPQQPPQDPTQYAQPPQQQQP 86
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 680 INQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 564
IN Y + + TW+ + C G + + R IL+A HC
Sbjct: 58 INTYTNVKNIDETWS-----KHCSGTLTSPRHILTATHC 91
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +1
Query: 64 KRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEHNMLAVIA 210
K+R+ + P++ P + + R + PW S P + P + V A
Sbjct: 111 KKRAVEPTPKQAAPIKEKSKSRESKKEPWKTSTAPAATAPVTETVTVAA 159
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 617 SCGGNILNQRSILSAAHCPYG-DATGRWRIRVGSTFANS 504
+C G I++ R IL A HC G + G W + + TF S
Sbjct: 192 TCTGTIVSPRHILIATHCFAGQNRDGSWNL-IEDTFDRS 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,030,333
Number of Sequences: 27780
Number of extensions: 420121
Number of successful extensions: 1322
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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