Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k23r
(745 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 110 1e-24
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 7e-20
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 85 4e-17
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 58 8e-09
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 52 5e-07
SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38) 29 0.59
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043) 29 5.3
SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31) 28 7.0
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 110 bits (265), Expect = 1e-24
Identities = 72/197 (36%), Positives = 101/197 (51%), Gaps = 19/197 (9%)
Frame = -2
Query: 702 KTHFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHIV 535
K L GD+NVI+VDW + ++ AV VG+ A L+ L+ L VH++
Sbjct: 135 KNELLWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVI 194
Query: 534 GFNLGAHVAGVTGRNLEGK---VARITGLDPSARDW---ENNVLRLGTNDAQYVEVIHTD 373
GF+ GAHVAG GR ++ + + RIT LDP+A W + +RL T+DA +V+VIHT
Sbjct: 195 GFSFGAHVAGYVGRRMKKRGRMIDRITALDPAAM-WFHKHHEDVRLDTSDALFVDVIHTS 253
Query: 372 GSGVNKNGLGVAIGHIDFFVNGRLVQPGCTN--------NLCSHNRAYEVFAATI-THGK 220
G+ IGH DF+ NG QPGC N C H RA +F ++ T
Sbjct: 254 AD----YGITSTIGHADFYPNGGKKQPGCDNFFRGFSSYLFCGHKRAPALFTTSLYTKTP 309
Query: 219 HYGNQCSTEAEITANNC 169
Y C +E + + NC
Sbjct: 310 LYSYPCRSEDDFNSGNC 326
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 94.7 bits (225), Expect = 7e-20
Identities = 63/167 (37%), Positives = 89/167 (53%), Gaps = 17/167 (10%)
Frame = -2
Query: 678 DYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLKLPLNKV----HIVGFNLGAHV 511
D NVI DWS + Y A VG+ I +K L ++VGF+LGAH+
Sbjct: 641 DANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYLVGFSLGAHI 700
Query: 510 AGVTGRNLEG---KVARITGLDPSARDWEN-NV-LRLGTNDAQYVEVIHTDGSGVNKNGL 346
+G GR + K+ RITGLDP++ + N +V +RL +DA +V+V+HTD ++ G
Sbjct: 701 SGYVGRRIAKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTD---MDLAGT 757
Query: 345 GVAIGHIDFFVNGRLVQPGCTNNL--------CSHNRAYEVFAATIT 229
GHIDF+ NG QPGC + L C H RA E +A ++T
Sbjct: 758 PTVSGHIDFYPNGGKKQPGCRDLLDGPINYVICDHMRAPEYYAESVT 804
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 85.4 bits (202), Expect = 4e-17
Identities = 57/150 (38%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Frame = -2
Query: 702 KTHFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKN-LKLPLNK----VHI 538
K L D NVI+VDW + Y AV VG+ +A F+K L L ++ H
Sbjct: 116 KDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFHS 175
Query: 537 VGFNLGAHVAGVTGRNLE--GK-VARITGLDPSARDWENNV--LRLGTNDAQYVEVIHTD 373
+GF+LGAH++G G+ L+ G+ + RITGLDP+ ++ +RL DAQ+V+VIHT
Sbjct: 176 IGFSLGAHISGYVGQRLKRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHTS 235
Query: 372 GSGVNKNGLGVAIGHIDFFVNGRLVQPGCT 283
G+ GH+DF+ NG Q GC+
Sbjct: 236 ----YVFGITAPHGHMDFYPNGGTSQRGCS 261
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 58.0 bits (134), Expect = 8e-09
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = -2
Query: 672 NVIVVDWSSFS--LSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHIVGFNLGAHV 511
NVI VDW S + L+ Y A VG+ +A + ++ L +VH++G +LGAHV
Sbjct: 55 NVITVDWQSGADGLNLYHVAAGNTRVVGAQLAELITTIQRVFDFDLRRVHLIGHSLGAHV 114
Query: 510 AGVTGRNLEGKVARIT 463
AG G L GKV RIT
Sbjct: 115 AGYAGERLSGKVGRIT 130
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 52.0 bits (119), Expect = 5e-07
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Frame = -2
Query: 459 LDPSARDWENNVL--RLGTNDAQYVEVIHTDGSGVNKNGLGVAIGHIDFFVNGRLVQPGC 286
LDP+ + N + RL +DA++V+V+HTD ++ G GHIDF+ NG QPGC
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTD---MDFAGTSTQSGHIDFYPNGGKNQPGC 58
Query: 285 -------TNNL-CSHNRAYEVFAATIT 229
+N L C H RA++ F +IT
Sbjct: 59 RDIADGPSNALKCDHVRAHDYFTESIT 85
>SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)
Length = 450
Score = 29.5 bits (63), Expect(2) = 0.59
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 290 PGWTRRPLTKKSMC-PIATPKPFLLTPDPSV*ITSTY*ASFVPSRSTLFSQSRAEGSRP 463
P +P+ +C P+ +P P +++P P I + + VP+ TL QS A P
Sbjct: 193 PSPASQPVAPSPVCIPVQSPAPNMMSPSPQQFIAQSPAPTSVPTPGTLNVQSPASILNP 251
Score = 21.0 bits (42), Expect(2) = 0.59
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 584 AILDPTPVTAITAVEYVDKLN 646
++ P P++A Y++KLN
Sbjct: 257 SVTSPAPLSAAEEQAYLEKLN 277
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = -2
Query: 540 IVGFNLGAHVAGVTG---RNLEG-KVARITG 460
++GF+LG HVAG G +N G K+ RI+G
Sbjct: 21 VIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = -2
Query: 423 LRLGTNDAQYVEVIHTDGSGVNKNGLGVAI-GHID-FFVNGRLVQPGCTNNLCSHNRAYE 250
+ + +++ ++ + SG + + HID +NG +V PG + Y
Sbjct: 1 MSMSSDEVNFLVYRYLQESGFQHSAFTFGVESHIDQSSINGSVVPPGALVTILQKGVQYV 60
Query: 249 VFAATITHGKHYGNQCSTEAEITANN-CRG 163
AT+T G Y EAE T CRG
Sbjct: 61 EAEATVTEGVQY-----VEAEATVTEVCRG 85
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -2
Query: 588 IATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 448
+ +FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 120 LLSFLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 166
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -2
Query: 324 DFFVNGRLVQPGCTNNLCSHNRAYEVFAATITHGKHYGNQCSTEA 190
D++ ++ G T+ C YE T GK YGN+C A
Sbjct: 1278 DYYAQCQVEDDGSTSCKCPIFCTYEYMPVCGTDGKTYGNKCEMRA 1322
>SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 702 KTHFLTSGDYNVIVVDWSSFSLSTYSTAV 616
K L GD+NVI+VDW + ++ AV
Sbjct: 20 KNELLWEGDFNVIIVDWMRGAWFPFTRAV 48
>SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -2
Query: 357 KNGLGVAIG---HIDFFVNGRLVQPGCTNNLCSHNRA 256
K+ G+ IG H+D VNG VQ C+HN+A
Sbjct: 12 KSSEGMYIGADLHLDKDVNGAYVQGSFIGGFCTHNKA 48
>SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043)
Length = 183
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 579 FLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 448
FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 1 FLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 44
>SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31)
Length = 778
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 14 VETNFIGHHRKLRFKFCRHHKWN 82
VE NF+GH R+ R CR K N
Sbjct: 233 VERNFVGHRRRCRRVVCRATKSN 255
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,059,790
Number of Sequences: 59808
Number of extensions: 496885
Number of successful extensions: 1156
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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