Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k22r
         (667 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep: ...    44   0.003
UniRef50_UPI00015B627F Cluster: PREDICTED: similar to CG34026-PA...    35   1.5  
UniRef50_UPI0000F2CC46 Cluster: PREDICTED: hypothetical protein;...    35   2.0  
UniRef50_Q4V4H7 Cluster: IP04046p; n=4; Sophophora|Rep: IP04046p...    34   2.7  
UniRef50_UPI00015B5416 Cluster: PREDICTED: hypothetical protein;...    33   4.7  
UniRef50_Q6CHA7 Cluster: Yarrowia lipolytica chromosome A of str...    33   8.2  

>UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep:
           HMG176 - Helicoverpa armigera (Cotton bollworm)
           (Heliothis armigera)
          Length = 176

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 17/41 (41%), Positives = 28/41 (68%)
 Frame = -2

Query: 582 GVSQFATVRLVGGGVGSTFVTLQXRNSARRGYHFNVQIWGR 460
           G  Q AT R+V G +G   +T+Q +++  RG+H+ ++IWGR
Sbjct: 124 GSGQGATARVVEGYLGRNSITIQLQSARGRGFHYRIEIWGR 164


>UniRef50_UPI00015B627F Cluster: PREDICTED: similar to CG34026-PA;
           n=3; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG34026-PA - Nasonia vitripennis
          Length = 116

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -2

Query: 567 ATVRLVGGGVGSTFVTLQXRNSARRGYHFNVQIWGR 460
           AT  ++ GGVG ++VT++  +   RG  F V+I+G+
Sbjct: 81  ATAEIIAGGVGHSYVTIKFVSERLRGIDFIVEIYGK 116


>UniRef50_UPI0000F2CC46 Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 285

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 28/81 (34%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
 Frame = -3

Query: 653 AGCQREVHGRPPXDAS---GPSEPGK*GCPSSRPSALSGAGSVQLSS-LSXSETRHEEDI 486
           AG +RE    PP       GP  P   GCP   P A  G  +   +  LS    R    I
Sbjct: 13  AGSEREGTPNPPSQQHSGLGPDRPRSRGCPPPSPPATLGIPARSFNGHLSRGAARISPQI 72

Query: 485 TSMYKFGDAKTHLSTRQTHVH 423
              Y FG  K H+ TR   VH
Sbjct: 73  HLFY-FGH-KMHVLTRGARVH 91


>UniRef50_Q4V4H7 Cluster: IP04046p; n=4; Sophophora|Rep: IP04046p -
           Drosophila melanogaster (Fruit fly)
          Length = 112

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 567 ATVRLVGGGVGSTFVTLQXRNSARRGYHFNVQIWGR 460
           A+  L  GG G  F T+  R    RG +  V+IWGR
Sbjct: 77  ASPSLYSGGPGYRFATVNLRGQVNRGINSTVEIWGR 112


>UniRef50_UPI00015B5416 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 129

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -2

Query: 567 ATVRLVGGGVGSTFVTLQXRNSARRGYHFNVQIWGR 460
           A V L+ GG   TFVTLQ ++   +   F V+I+G+
Sbjct: 93  ADVALINGGPDQTFVTLQFKSQRSQSIDFVVEIYGK 128


>UniRef50_Q6CHA7 Cluster: Yarrowia lipolytica chromosome A of strain
           CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome A of
           strain CLIB122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 368

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = -3

Query: 644 QREVHGRPPXDASGPSEPGK*GCPSSRPSALSGAGSVQLSSLSXSETRHEEDITSMYKF 468
           Q+  H  PP   S P E    G   ++PS+ SG+     SS S S T+      S+Y+F
Sbjct: 271 QQTAHKLPPTPRSDPFE----GLKPNKPSSSSGSTVSASSSKSASSTKSSGSAASIYEF 325


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,760,278
Number of Sequences: 1657284
Number of extensions: 10598649
Number of successful extensions: 25335
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25300
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)