Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k22r
(667 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 25 0.74
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.2
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 23 2.2
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 2.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.2
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 22 5.2
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 9.1
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 9.1
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 9.1
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 24.6 bits (51), Expect = 0.74
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 644 QREVHGRPPXDASGPSEPG 588
+ +++G PP SGP+E G
Sbjct: 309 ESDINGTPPLHISGPAEAG 327
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62
+R I+I + C R I W Q R WK
Sbjct: 248 RRRIEIAHALCLTERQIKIWFQNRRMKWK 276
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62
+R I+I + C R I W Q R WK
Sbjct: 248 RRRIEIAHALCLTERQIKIWFQNRRMKWK 276
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62
+R I+I + C R I W Q R WK
Sbjct: 270 RRRIEIAHALCLTERQIKIWFQNRRMKWK 298
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62
+R I+I + C R I W Q R WK
Sbjct: 248 RRRIEIAHALCLTERQIKIWFQNRRMKWK 276
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62
+R I+I + C R I W Q R WK
Sbjct: 204 RRRIEIAHALCLTERQIKIWFQNRRMKWK 232
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62
+R I+I + C R I W Q R WK
Sbjct: 248 RRRIEIAHALCLTERQIKIWFQNRRMKWK 276
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62
+R I+I + C R I W Q R WK
Sbjct: 36 RRRIEIAHALCLTERQIKIWFQNRRMKWK 64
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62
+R I+I + C R I W Q R WK
Sbjct: 272 RRRIEIAHALCLTERQIKIWFQNRRMKWK 300
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62
+R I+I + C R I W Q R WK
Sbjct: 248 RRRIEIAHALCLTERQIKIWFQNRRMKWK 276
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 12 LXILPLDKTYSHIKIRAF 65
L LP+D+ HI+I +F
Sbjct: 171 LQYLPMDRQLCHIEIESF 188
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 569 NWDTPTSRA 595
+WDTPTS A
Sbjct: 6 DWDTPTSSA 14
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 9.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 241 LP*VSFKCLKSTLCKLD*SGITPFKVKRIHLNK 339
LP ++ K L T+ K+ + + PF + LNK
Sbjct: 258 LPDLNHKPLNLTIKKMPIAIVAPFTIVEPKLNK 290
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 9.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 241 LP*VSFKCLKSTLCKLD*SGITPFKVKRIHLNK 339
LP ++ K L T+ K+ + + PF + LNK
Sbjct: 150 LPDLNHKPLNLTIKKMPIAIVAPFTIVEPKLNK 182
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,998
Number of Sequences: 336
Number of extensions: 2558
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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