BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12k22r (667 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 25 0.74 AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2 AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2 AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.2 AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2 AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.2 AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.2 AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 23 2.2 AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 2.2 AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.2 AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 22 5.2 AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 9.1 AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 9.1 AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 9.1 >DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc growth factor 2 protein. Length = 439 Score = 24.6 bits (51), Expect = 0.74 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -3 Query: 644 QREVHGRPPXDASGPSEPG 588 + +++G PP SGP+E G Sbjct: 309 ESDINGTPPLHISGPAEAG 327 >AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 23.0 bits (47), Expect = 2.2 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62 +R I+I + C R I W Q R WK Sbjct: 248 RRRIEIAHALCLTERQIKIWFQNRRMKWK 276 >AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 23.0 bits (47), Expect = 2.2 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62 +R I+I + C R I W Q R WK Sbjct: 248 RRRIEIAHALCLTERQIKIWFQNRRMKWK 276 >AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain transcription factor Prothoraxlessprotein. Length = 323 Score = 23.0 bits (47), Expect = 2.2 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62 +R I+I + C R I W Q R WK Sbjct: 270 RRRIEIAHALCLTERQIKIWFQNRRMKWK 298 >AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 23.0 bits (47), Expect = 2.2 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62 +R I+I + C R I W Q R WK Sbjct: 248 RRRIEIAHALCLTERQIKIWFQNRRMKWK 276 >AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax protein. Length = 268 Score = 23.0 bits (47), Expect = 2.2 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62 +R I+I + C R I W Q R WK Sbjct: 204 RRRIEIAHALCLTERQIKIWFQNRRMKWK 232 >AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. Length = 312 Score = 23.0 bits (47), Expect = 2.2 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62 +R I+I + C R I W Q R WK Sbjct: 248 RRRIEIAHALCLTERQIKIWFQNRRMKWK 276 >AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax protein. Length = 100 Score = 23.0 bits (47), Expect = 2.2 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62 +R I+I + C R I W Q R WK Sbjct: 36 RRRIEIAHALCLTERQIKIWFQNRRMKWK 64 >AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless protein. Length = 325 Score = 23.0 bits (47), Expect = 2.2 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62 +R I+I + C R I W Q R WK Sbjct: 272 RRRIEIAHALCLTERQIKIWFQNRRMKWK 300 >AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced Scr protein. Length = 312 Score = 23.0 bits (47), Expect = 2.2 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62 +R I+I + C R I W Q R WK Sbjct: 248 RRRIEIAHALCLTERQIKIWFQNRRMKWK 276 >AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor subunit protein. Length = 243 Score = 21.8 bits (44), Expect = 5.2 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +3 Query: 12 LXILPLDKTYSHIKIRAF 65 L LP+D+ HI+I +F Sbjct: 171 LQYLPMDRQLCHIEIESF 188 >AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase protein. Length = 580 Score = 21.0 bits (42), Expect = 9.1 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +2 Query: 569 NWDTPTSRA 595 +WDTPTS A Sbjct: 6 DWDTPTSSA 14 >AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. Length = 790 Score = 21.0 bits (42), Expect = 9.1 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +1 Query: 241 LP*VSFKCLKSTLCKLD*SGITPFKVKRIHLNK 339 LP ++ K L T+ K+ + + PF + LNK Sbjct: 258 LPDLNHKPLNLTIKKMPIAIVAPFTIVEPKLNK 290 >AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. Length = 682 Score = 21.0 bits (42), Expect = 9.1 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +1 Query: 241 LP*VSFKCLKSTLCKLD*SGITPFKVKRIHLNK 339 LP ++ K L T+ K+ + + PF + LNK Sbjct: 150 LPDLNHKPLNLTIKKMPIAIVAPFTIVEPKLNK 182 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 136,998 Number of Sequences: 336 Number of extensions: 2558 Number of successful extensions: 16 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 17281430 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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