Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k22r
         (667 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    24   3.7  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    23   8.7  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   8.7  

>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 635 VHGRPPXDASGPSEPG 588
           + G PP  A GPS PG
Sbjct: 311 ITGVPPLPADGPSNPG 326


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62
           +R I+I +  C   R I  W Q  R  WK
Sbjct: 272 RRRIEIAHALCLTERQIKIWFQNRRMKWK 300


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 148 QRLIDIENIECYNNRSIY*WRQYXRA*WK 62
           +R I+I +  C   R I  W Q  R  WK
Sbjct: 308 RRRIEIAHALCLTERQIKIWFQNRRMKWK 336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,061
Number of Sequences: 2352
Number of extensions: 11473
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)