BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12k22r (667 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U43375-4|AAA83621.1| 205|Caenorhabditis elegans Hypothetical pr... 31 0.97 Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 29 3.9 Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 29 3.9 AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 29 3.9 AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 29 3.9 U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 28 5.2 Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical p... 27 9.1 Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 27 9.1 Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 27 9.1 >U43375-4|AAA83621.1| 205|Caenorhabditis elegans Hypothetical protein K09C4.6 protein. Length = 205 Score = 30.7 bits (66), Expect = 0.97 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -3 Query: 575 PSSRPSALSGAGSVQLSSLSXSETRHEEDITSMYKFGDAKTHL 447 P+ + ++LS V SL S RHE+ S+Y FG+ K L Sbjct: 116 PTKQATSLSSVRFVTTDSLRNSLPRHEKLRASVYDFGEMKAFL 158 >Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical protein B0457.1b protein. Length = 1012 Score = 28.7 bits (61), Expect = 3.9 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -3 Query: 632 HGRPPXDASGPSEPGK*GCPSSRPSALSGAGSVQLSSLSXSETRHEEDITSM 477 H RPP + S P P G P+SR +G SS ++ + + +SM Sbjct: 934 HHRPPPEFSPPPPPLSTGPPNSRHYGTGSSGRRPPSSKMSDDSAYSDGSSSM 985 >Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical protein B0457.1a protein. Length = 1014 Score = 28.7 bits (61), Expect = 3.9 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -3 Query: 632 HGRPPXDASGPSEPGK*GCPSSRPSALSGAGSVQLSSLSXSETRHEEDITSM 477 H RPP + S P P G P+SR +G SS ++ + + +SM Sbjct: 936 HHRPPPEFSPPPPPLSTGPPNSRHYGTGSSGRRPPSSKMSDDSAYSDGSSSM 987 >AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like protein LAT-1B protein. Length = 1012 Score = 28.7 bits (61), Expect = 3.9 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -3 Query: 632 HGRPPXDASGPSEPGK*GCPSSRPSALSGAGSVQLSSLSXSETRHEEDITSM 477 H RPP + S P P G P+SR +G SS ++ + + +SM Sbjct: 934 HHRPPPEFSPPPPPLSTGPPNSRHYGTGSSGRRPPSSKMSDDSAYSDGSSSM 985 >AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like protein LAT-1A protein. Length = 1014 Score = 28.7 bits (61), Expect = 3.9 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -3 Query: 632 HGRPPXDASGPSEPGK*GCPSSRPSALSGAGSVQLSSLSXSETRHEEDITSM 477 H RPP + S P P G P+SR +G SS ++ + + +SM Sbjct: 936 HHRPPPEFSPPPPPLSTGPPNSRHYGTGSSGRRPPSSKMSDDSAYSDGSSSM 987 >U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical protein F30H5.3 protein. Length = 1599 Score = 28.3 bits (60), Expect = 5.2 Identities = 8/21 (38%), Positives = 16/21 (76%) Frame = -1 Query: 487 SLQCTNLGTLRLICPPVKHMC 425 + +CT++G+++L CP V +C Sbjct: 426 NFECTSIGSMQLCCPTVASVC 446 >Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical protein C39E9.9 protein. Length = 276 Score = 27.5 bits (58), Expect = 9.1 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -3 Query: 650 GCQREVHGRPPXDASGPSEPGK*G 579 GC +V+ PP A P EPG G Sbjct: 75 GCMNKVNNCPPGPAGPPGEPGAPG 98 >Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical protein T11B7.3b protein. Length = 273 Score = 27.5 bits (58), Expect = 9.1 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%) Frame = -3 Query: 650 GCQREVHGRP-----PXDASGPSEPGK*GCP 573 G ++HG+P P DA P PG+ G P Sbjct: 169 GAASQIHGKPGLPGPPGDAGAPGAPGQDGAP 199 >Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical protein T11B7.3a protein. Length = 297 Score = 27.5 bits (58), Expect = 9.1 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%) Frame = -3 Query: 650 GCQREVHGRP-----PXDASGPSEPGK*GCP 573 G ++HG+P P DA P PG+ G P Sbjct: 169 GAASQIHGKPGLPGPPGDAGAPGAPGQDGAP 199 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,417,484 Number of Sequences: 27780 Number of extensions: 255030 Number of successful extensions: 632 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 598 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 632 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1497472076 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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