Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k22r
         (667 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43375-4|AAA83621.1|  205|Caenorhabditis elegans Hypothetical pr...    31   0.97 
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    29   3.9  
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    29   3.9  
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z70307-10|CAA94328.1|  276|Caenorhabditis elegans Hypothetical p...    27   9.1  
Z54237-5|CAN86900.1|  273|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z54237-4|CAN86899.1|  297|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>U43375-4|AAA83621.1|  205|Caenorhabditis elegans Hypothetical
           protein K09C4.6 protein.
          Length = 205

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 575 PSSRPSALSGAGSVQLSSLSXSETRHEEDITSMYKFGDAKTHL 447
           P+ + ++LS    V   SL  S  RHE+   S+Y FG+ K  L
Sbjct: 116 PTKQATSLSSVRFVTTDSLRNSLPRHEKLRASVYDFGEMKAFL 158


>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical protein
            B0457.1b protein.
          Length = 1012

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -3

Query: 632  HGRPPXDASGPSEPGK*GCPSSRPSALSGAGSVQLSSLSXSETRHEEDITSM 477
            H RPP + S P  P   G P+SR      +G    SS    ++ + +  +SM
Sbjct: 934  HHRPPPEFSPPPPPLSTGPPNSRHYGTGSSGRRPPSSKMSDDSAYSDGSSSM 985


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical protein
            B0457.1a protein.
          Length = 1014

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -3

Query: 632  HGRPPXDASGPSEPGK*GCPSSRPSALSGAGSVQLSSLSXSETRHEEDITSM 477
            H RPP + S P  P   G P+SR      +G    SS    ++ + +  +SM
Sbjct: 936  HHRPPPEFSPPPPPLSTGPPNSRHYGTGSSGRRPPSSKMSDDSAYSDGSSSM 987


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
            protein LAT-1B protein.
          Length = 1012

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -3

Query: 632  HGRPPXDASGPSEPGK*GCPSSRPSALSGAGSVQLSSLSXSETRHEEDITSM 477
            H RPP + S P  P   G P+SR      +G    SS    ++ + +  +SM
Sbjct: 934  HHRPPPEFSPPPPPLSTGPPNSRHYGTGSSGRRPPSSKMSDDSAYSDGSSSM 985


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
            protein LAT-1A protein.
          Length = 1014

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -3

Query: 632  HGRPPXDASGPSEPGK*GCPSSRPSALSGAGSVQLSSLSXSETRHEEDITSM 477
            H RPP + S P  P   G P+SR      +G    SS    ++ + +  +SM
Sbjct: 936  HHRPPPEFSPPPPPLSTGPPNSRHYGTGSSGRRPPSSKMSDDSAYSDGSSSM 987


>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
           protein F30H5.3 protein.
          Length = 1599

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -1

Query: 487 SLQCTNLGTLRLICPPVKHMC 425
           + +CT++G+++L CP V  +C
Sbjct: 426 NFECTSIGSMQLCCPTVASVC 446


>Z70307-10|CAA94328.1|  276|Caenorhabditis elegans Hypothetical
           protein C39E9.9 protein.
          Length = 276

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 650 GCQREVHGRPPXDASGPSEPGK*G 579
           GC  +V+  PP  A  P EPG  G
Sbjct: 75  GCMNKVNNCPPGPAGPPGEPGAPG 98


>Z54237-5|CAN86900.1|  273|Caenorhabditis elegans Hypothetical
           protein T11B7.3b protein.
          Length = 273

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
 Frame = -3

Query: 650 GCQREVHGRP-----PXDASGPSEPGK*GCP 573
           G   ++HG+P     P DA  P  PG+ G P
Sbjct: 169 GAASQIHGKPGLPGPPGDAGAPGAPGQDGAP 199


>Z54237-4|CAN86899.1|  297|Caenorhabditis elegans Hypothetical
           protein T11B7.3a protein.
          Length = 297

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
 Frame = -3

Query: 650 GCQREVHGRP-----PXDASGPSEPGK*GCP 573
           G   ++HG+P     P DA  P  PG+ G P
Sbjct: 169 GAASQIHGKPGLPGPPGDAGAPGAPGQDGAP 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,417,484
Number of Sequences: 27780
Number of extensions: 255030
Number of successful extensions: 632
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)