Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k20r
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023906-1|ABA81840.1|  914|Drosophila melanogaster GH18655p pro...    29   4.8  
AJ006524-1|CAA07085.1|  914|Drosophila melanogaster coatomer, be...    29   4.8  
AJ006523-1|CAA07084.1|  914|Drosophila melanogaster coatomer, be...    29   4.8  
AE014134-2340|AAF53294.2|  914|Drosophila melanogaster CG6699-PA...    29   4.8  
BT022230-1|AAY54646.1|  346|Drosophila melanogaster IP12463p pro...    29   6.3  
AE014296-1415|AAF50449.1|  346|Drosophila melanogaster CG7194-PA...    29   6.3  

>BT023906-1|ABA81840.1|  914|Drosophila melanogaster GH18655p
           protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 429 DDVA*SSAFDVLGESGKCMEVFLWRDDNFSSIN 527
           +D    SAF+VLGE  +C++  LW  D F   N
Sbjct: 508 EDDGVESAFNVLGEVSECVKTGLWVGDCFIYTN 540


>AJ006524-1|CAA07085.1|  914|Drosophila melanogaster coatomer,
           beta-prime subunit protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 429 DDVA*SSAFDVLGESGKCMEVFLWRDDNFSSIN 527
           +D    SAF+VLGE  +C++  LW  D F   N
Sbjct: 508 EDDGVESAFNVLGEVSECVKTGLWVGDCFIYTN 540


>AJ006523-1|CAA07084.1|  914|Drosophila melanogaster coatomer,
           beta-prime subunit protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 429 DDVA*SSAFDVLGESGKCMEVFLWRDDNFSSIN 527
           +D    SAF+VLGE  +C++  LW  D F   N
Sbjct: 508 EDDGVESAFNVLGEVSECVKTGLWVGDCFIYTN 540


>AE014134-2340|AAF53294.2|  914|Drosophila melanogaster CG6699-PA
           protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 429 DDVA*SSAFDVLGESGKCMEVFLWRDDNFSSIN 527
           +D    SAF+VLGE  +C++  LW  D F   N
Sbjct: 508 EDDGVESAFNVLGEVSECVKTGLWVGDCFIYTN 540


>BT022230-1|AAY54646.1|  346|Drosophila melanogaster IP12463p
           protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
 Frame = -1

Query: 641 DEQTEINARQERLVTNQVASAIENIRKQIREAGFDPLDV-----DRREIVIPPEEDFHAL 477
           D +  +  ++   + N V   ++ + K  R+  FD L +     DR ++ +P E D H  
Sbjct: 18  DNERAVYTKEAEEIQNYVVDELKRVDKTFRQV-FDGLSLGGSYLDRVKLNLPDEFDLHMK 76

Query: 476 AAFAEDIKST 447
             F  DI+ T
Sbjct: 77  LKFPFDIRPT 86


>AE014296-1415|AAF50449.1|  346|Drosophila melanogaster CG7194-PA
           protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
 Frame = -1

Query: 641 DEQTEINARQERLVTNQVASAIENIRKQIREAGFDPLDV-----DRREIVIPPEEDFHAL 477
           D +  +  ++   + N V   ++ + K  R+  FD L +     DR ++ +P E D H  
Sbjct: 18  DNERAVYTKEAEEIQNYVVDELKRVDKTFRQV-FDGLSLGGSYLDRVKLNLPDEFDLHMK 76

Query: 476 AAFAEDIKST 447
             F  DI+ T
Sbjct: 77  LKFPFDIRPT 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,179,318
Number of Sequences: 53049
Number of extensions: 631700
Number of successful extensions: 1946
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1940
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)