Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k20f
(618 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4UWS3 Cluster: Putative glycosyl hydrolase family5; n=... 35 1.4
UniRef50_Q04561 Cluster: Replicase polyprotein 1ab (ORF1ab polyp... 35 1.8
UniRef50_Q0K226 Cluster: Hydrolase of the alpha/beta superfamily... 34 2.4
UniRef50_A1ZI43 Cluster: Serum paraoxonase/arylesterase 2; n=1; ... 34 3.1
UniRef50_Q6CGB7 Cluster: Yarrowia lipolytica chromosome A of str... 34 3.1
UniRef50_A0RNY6 Cluster: Haemagglutination activity domain prote... 33 4.1
UniRef50_A7F0F7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_Q8DTS8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_A3HMW1 Cluster: TonB-dependent siderophore receptor; n=... 33 5.5
UniRef50_Q4QJ73 Cluster: Putative uncharacterized protein; n=3; ... 33 5.5
UniRef50_UPI00015B4B40 Cluster: PREDICTED: similar to phosphatid... 33 7.2
UniRef50_A2CLL2 Cluster: BryC; n=5; root|Rep: BryC - Candidatus ... 33 7.2
UniRef50_A0MS25 Cluster: BryB; n=2; Candidatus Endobugula sertul... 33 7.2
UniRef50_UPI0000D94D7A Cluster: PREDICTED: similar to Ksp37; n=2... 32 9.5
UniRef50_A6CWQ4 Cluster: Putative lipoprotein; n=1; Vibrio shilo... 32 9.5
UniRef50_A5FCW4 Cluster: TonB-dependent receptor precursor; n=1;... 32 9.5
UniRef50_Q9M0N3 Cluster: Putative uncharacterized protein AT4g10... 32 9.5
>UniRef50_A4UWS3 Cluster: Putative glycosyl hydrolase family5; n=1;
uncultured symbiotic protist of Hodotermopsis
sjoestedti|Rep: Putative glycosyl hydrolase family5 -
uncultured symbiotic protist of Hodotermopsis sjoestedti
Length = 374
Score = 35.1 bits (77), Expect = 1.4
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = +1
Query: 82 TFDEQTEINARQERLVTNQVASAIENIRKQIREAGFDPLDVDRREIVIPPEEDFHA---- 249
TFD+Q E+NA+Q+ L T Q+A+ E + + AG + + R++ P +E+
Sbjct: 132 TFDKQKEVNAKQKALWT-QIATYFEGYDEHLLFAGTNEV---RKDYGTPSDENIEVQNSY 187
Query: 250 LAAFAEDIKSTGLSN 294
L F + +++TG +N
Sbjct: 188 LQTFVDAVRATGGNN 202
>UniRef50_Q04561 Cluster: Replicase polyprotein 1ab (ORF1ab
polyprotein) [Includes: Replicase polyprotein 1a (ORF1a)]
[Contains: Nsp1-alpha papain-like cysteine proteinase (EC
3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine
proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine
proteinase (EC 3.4.22.-) (CP2) (CP); Non-structural
protein 3 (Nsp3); 3C-like serine proteinase (EC 3.4.21.-)
(3CLSP) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7);
Non-structural protein 8 (Nsp8); RNA-directed RNA
polymerase (EC 2.7.7.48) (RdRp) (Pol) (Nsp9); Helicase
(EC 3.6.1.-) (Hel) (Nsp10); Non-structural protein 11
(Nsp11); Non-structural protein 12 (Nsp12)]; n=33;
Porcine respiratory and reproductive syndrome virus|Rep:
Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:
Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha
papain-like cysteine proteinase (EC 3.4.22.-)
(PCP1-alpha); Nsp1-beta papain-like cysteine proteinase
(EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC
3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3);
3C-like serine proteinase (EC 3.4.21.-) (3CLSP) (Nsp4);
Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural
protein 8 (Nsp8); RNA-directed RNA polymerase (EC
2.7.7.48) (RdRp) (Pol) (Nsp9); Helicase (EC 3.6.1.-)
(Hel) (Nsp10); Non-structural protein 11 (Nsp11);
Non-structural protein 12 (Nsp12)] - Porcine reproductive
and respiratory syndrome virus (strain Lelystad)(PRRSV)
Length = 3859
Score = 34.7 bits (76), Expect = 1.8
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 138 LVSDQALLTCVYLRLFIK-SLCTGTSQNCGENNENLHDVRAC 16
LV D + + +LR F + +L G SQ+CG NNE+L AC
Sbjct: 2049 LVGDGSFSSAFFLRYFAEGNLRKGVSQSCGMNNESLTAALAC 2090
>UniRef50_Q0K226 Cluster: Hydrolase of the alpha/beta superfamily;
n=3; Cupriavidus|Rep: Hydrolase of the alpha/beta
superfamily - Ralstonia eutropha (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337)(Cupriavidus necator (strain
ATCC 17699 / H16 / DSM 428 / Stanier337))
Length = 334
Score = 34.3 bits (75), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 364 VEASVGAARVELNVFDYEGYASASGRAAINNLRVSA 471
V+A + A + VFDY GY +SGR ++ LR A
Sbjct: 106 VQAMLAGAGIASYVFDYSGYGRSSGRPSVRRLREDA 141
>UniRef50_A1ZI43 Cluster: Serum paraoxonase/arylesterase 2; n=1;
Microscilla marina ATCC 23134|Rep: Serum
paraoxonase/arylesterase 2 - Microscilla marina ATCC
23134
Length = 362
Score = 33.9 bits (74), Expect = 3.1
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -1
Query: 450 YGGTSTGASVAFVIEHIKLNTGSTDASFNTR*TQD*VETGAKDAKIVSDNDDVA 289
Y TS+G + FV+ H KLNT T F R TQ + + S ND VA
Sbjct: 114 YFRTSSGKELLFVVNHSKLNTHQTIEKFEIRDTQLVYLESIQHNLMTSPNDVVA 167
>UniRef50_Q6CGB7 Cluster: Yarrowia lipolytica chromosome A of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome A of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 493
Score = 33.9 bits (74), Expect = 3.1
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 88 DEQTEINARQERLVTNQVASAIENIRKQIREAGFDPLDVDRREIVIPPEED 240
+++ E A + R + NQ +EN++ ++ E GFD D+DR + EED
Sbjct: 62 EDEEETQADKRRRLANQY---LENLKDEMGEIGFDAADLDRENLSRRLEED 109
>UniRef50_A0RNY6 Cluster: Haemagglutination activity domain protein;
n=5; Campylobacter|Rep: Haemagglutination activity domain
protein - Campylobacter fetus subsp. fetus (strain 82-40)
Length = 1745
Score = 33.5 bits (73), Expect = 4.1
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -1
Query: 609 EVSDGVGEVASKQINI*IRLNSS*GKVYIETPNRNSGDDADAYTHFSTNTKVVYGGTSTG 430
E++ GVGE S + I LNS G +E + D Y T + GGT+T
Sbjct: 1595 EINGGVGESLSLKAGI---LNSKVGSGNLEVARKVLESDVKTYEKSDGATVRINGGTNTS 1651
Query: 429 -ASVAFVIEHIKLNTGSTDASFN 364
+V + +HI TGS +++ N
Sbjct: 1652 FGAVVDIEDHIN-KTGSANSASN 1673
>UniRef50_A7F0F7 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 547
Score = 33.5 bits (73), Expect = 4.1
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 71 PVHKLLMNRRR*THVKSAWSLTRL-LPPSKISESK*EKPDSIHWTLIEEKLSSLQRKTSM 247
P K ++R + HV S+ S T L +PP K SK +P SIH IE + ++ SM
Sbjct: 401 PTRKHGLSRTQSHHVSSSPSATSLPIPPPKRGSSKQGRPPSIH--SIEAPSPHISKRASM 458
Query: 248 HLPLSP 265
P P
Sbjct: 459 QGPPPP 464
>UniRef50_Q8DTS8 Cluster: Putative uncharacterized protein; n=1;
Streptococcus mutans|Rep: Putative uncharacterized
protein - Streptococcus mutans
Length = 213
Score = 33.1 bits (72), Expect = 5.5
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +1
Query: 43 VVLTAILACASTQTFDEQTEINARQERLVTNQVASAIEN--IRKQIRE 180
+V+TA+ A S Q F++ T N+ Q+R +TN+ AI+N IR++IR+
Sbjct: 27 IVMTALYA-TSRQDFNKWTATNSMQDRTITNK-KKAIKNLKIREKIRD 72
>UniRef50_A3HMW1 Cluster: TonB-dependent siderophore receptor; n=14;
Pseudomonas|Rep: TonB-dependent siderophore receptor -
Pseudomonas putida (strain GB-1)
Length = 913
Score = 33.1 bits (72), Expect = 5.5
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +1
Query: 118 ERLVTN--QVASAIEN-IRKQIREAGFDPLDVDRREIVIPPEEDFHALAAFAEDIKSTGL 288
+RL +N Q AI++ +R+ + +G + + D R V+ + ALA D++S L
Sbjct: 174 DRLQSNGLQGQYAIDHALRQLLNGSGLEAVSQDGRNYVLQAQHQDAALALPDTDVRSFSL 233
Query: 289 SNIVIITNNFSILSARLNLVLSLPRVEASVGAARVELNVFDYEG 420
N + ++ +++ S+P VE S + V D +G
Sbjct: 234 GNALGSMEGYNATHSQVATKTSMPLVETSQSVSVVTRQQMDDQG 277
>UniRef50_Q4QJ73 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 321
Score = 33.1 bits (72), Expect = 5.5
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 79 QTFDEQTEINARQERLVTNQVASAIENIRKQIREAGFDPLDVDRRE 216
QT +EQ I RQ+ LV+ + +E + Q+R AG PL+ ++E
Sbjct: 26 QTINEQQLIILRQKELVST-LKECVEELGAQLRRAGVKPLEAAQKE 70
>UniRef50_UPI00015B4B40 Cluster: PREDICTED: similar to
phosphatidylinositol 3-kinase catalytic subunit alpha,
beta, delta; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to phosphatidylinositol 3-kinase catalytic
subunit alpha, beta, delta - Nasonia vitripennis
Length = 1103
Score = 32.7 bits (71), Expect = 7.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 216 NCHPSRGRLPCTCRFRRGHQKHWIKQHRH 302
N +G P T FRRG W+K H H
Sbjct: 891 NIQKEKGTFPATAAFRRGSLLAWLKDHNH 919
>UniRef50_A2CLL2 Cluster: BryC; n=5; root|Rep: BryC - Candidatus
Endobugula sertula (Bugula neritina bacterial symbiont)
Length = 5381
Score = 32.7 bits (71), Expect = 7.2
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +1
Query: 103 INARQERLVTNQVASAIENIRKQIREAGFDPLDVDRREIVIPPEEDFHALAAFAEDIKST 282
I+ R+ ++ Q +EN I +AG +P + R + + +A ST
Sbjct: 504 ISPREAEVMDPQQRLFLENAWSCIEDAGINPKMLSRSRCGVFVGCGANDYSALMNSSHST 563
Query: 283 GLSNIVIITNNFSILSARLNLVLSL 357
L + + NN SILSAR++ L+L
Sbjct: 564 SLELMKELGNNSSILSARISYFLNL 588
>UniRef50_A0MS25 Cluster: BryB; n=2; Candidatus Endobugula
sertula|Rep: BryB - Candidatus Endobugula sertula
(Bugula neritina bacterial symbiont)
Length = 5521
Score = 32.7 bits (71), Expect = 7.2
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +1
Query: 103 INARQERLVTNQVASAIENIRKQIREAGFDPLDVDRREIVIPPEEDFHALAAFAEDIKST 282
I+ R+ ++ Q +EN I +AG +P + R + + +A ST
Sbjct: 517 ISPREAEVMDPQQRLFLENAWSCIEDAGINPKMLSRSRCGVFVGCGANDYSALMNSSHST 576
Query: 283 GLSNIVIITNNFSILSARLNLVLSL 357
L + + NN SILSAR++ L+L
Sbjct: 577 SLELMKELGNNSSILSARISYFLNL 601
>UniRef50_UPI0000D94D7A Cluster: PREDICTED: similar to Ksp37; n=2;
Mammalia|Rep: PREDICTED: similar to Ksp37 - Monodelphis
domestica
Length = 223
Score = 32.3 bits (70), Expect = 9.5
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -2
Query: 593 SERSRPNKLTFRSASTPPK 537
SE SRP+KL FRS TPPK
Sbjct: 139 SEASRPSKLGFRSEGTPPK 157
>UniRef50_A6CWQ4 Cluster: Putative lipoprotein; n=1; Vibrio shilonii
AK1|Rep: Putative lipoprotein - Vibrio shilonii AK1
Length = 423
Score = 32.3 bits (70), Expect = 9.5
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +1
Query: 163 RKQIREAGFDPLDVDRREIVIPPEEDFHALAAFAEDIKSTGL---SNIVIITNNFSILSA 333
RKQI P + EI +P + HA+ FA++I + SN+ I ++ S
Sbjct: 173 RKQIEVNNLAP----KSEIALPDRNNIHAVIKFADEISDGWVQTHSNMQTIISDDSFDKQ 228
Query: 334 RLNLVLSLPRVEASVGAARVELNVFDYEGYA 426
RLN V + + G L+ F++ G+A
Sbjct: 229 RLNEVRNYVHELGTSGLVVNNLSGFEHPGHA 259
>UniRef50_A5FCW4 Cluster: TonB-dependent receptor precursor; n=1;
Flavobacterium johnsoniae UW101|Rep: TonB-dependent
receptor precursor - Flavobacterium johnsoniae UW101
Length = 1189
Score = 32.3 bits (70), Expect = 9.5
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Frame = +1
Query: 73 STQTFDEQTEINARQERLVTNQVASAIENIRKQIREAGFDPLDVDRREIVIPPEEDFHAL 252
S F ++ + +++ NQ A+ E + + G +D+ +IVI + +
Sbjct: 69 SDYVFFYNDDLLSSAKKVSLNQYATVTEILDTALSNTGLTYTIIDK-QIVIKKSKKIQPV 127
Query: 253 AAFAEDIKST--GLSNIVIITNNFSILSARLNLVLSLPRVEASVGAARVELNVFDYEGYA 426
DI T S +I N ++S + N ++ + E + AA + FDY GY
Sbjct: 128 QQQEYDITGTVTDKSGNPLIGVNVILVSNKSNWDITREKGEFRIRAAASDSLRFDYLGYK 187
Query: 427 SASGRAAINNLRV 465
S + INN RV
Sbjct: 188 SKT--VGINNKRV 198
>UniRef50_Q9M0N3 Cluster: Putative uncharacterized protein
AT4g10730; n=5; Magnoliophyta|Rep: Putative
uncharacterized protein AT4g10730 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 693
Score = 32.3 bits (70), Expect = 9.5
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = +1
Query: 103 INARQERLVTNQVASAIENIRKQIREA-GFD-PLDVDRREIVIPPEEDFHALAAFAEDIK 276
IN+ E++ + + + ++ +R A F PL++ R + F + I
Sbjct: 451 INSDSEKVHGYERSESERQLKSSVRRAPSFSGPLNLPNRASANSLSAPIKSSGGFRDSID 510
Query: 277 STGLSNIVIITNNFSILSARLNLVLSLP-RVEASVG 381
+N+V I FS+ S L+L + P R ASVG
Sbjct: 511 DKSKANVVQIKGRFSVTSENLDLARASPLRKSASVG 546
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,247,334
Number of Sequences: 1657284
Number of extensions: 10874302
Number of successful extensions: 30805
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 29917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30794
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -