Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k18f
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    72   5e-15
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   1.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   2.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   5.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.3  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           21   7.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 71.7 bits (168), Expect = 5e-15
 Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 9/120 (7%)
 Frame = +3

Query: 252 NPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRW 431
           NP RI+GG+ T IN++P +A +  T+   +    CG  I+++R +L+AAHC   + T + 
Sbjct: 157 NPSRIVGGTNTGINEFPMMAGIKRTY---EPGMICGATIISKRYVLTAAHCIIDENTTKL 213

Query: 432 RIRVG-----STFANSGGVVHNVNRIIIHPNYNRRTAD----SDLCILRSNSNIAYNNNV 584
            I VG     S    +  V+H++N++IIHP Y+    D    +D+ +L++  +I + + V
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKV 273


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -3

Query: 527 SSTSVIVG-MNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGT 390
           SS  V +G  ND++  +   +P+   GG+++ +P++ S    +VS T
Sbjct: 60  SSGGVELGWFNDSAAAITSTSPSYPGGGSSSPSPSSPSSFFSSVSPT 106


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 230 SKPKGQQNNGRPHILSRTTDSNHYPGRWI 144
           SK +G  N+G  +ILS +   N     WI
Sbjct: 351 SKDQGPPNDGNGNILSPSIHDNICSNGWI 379


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 242 SRHSSKPKGQQNNGRPHILSRTTDSNH 162
           +RHSSK   Q NN        ++ SN+
Sbjct: 432 ARHSSKSDNQNNNQHNDQAHHSSKSNN 458


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 288  INQYPGIAALLYTWNWNQWWQ 350
            +  Y   AA + TWN  ++W+
Sbjct: 1178 LRPYLRTAAAILTWNEKRFWE 1198


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 435 IRVGSTFANSGGVVHNVNRIIIHPNYN 515
           +R  S   N GGV H  N  + H N++
Sbjct: 261 VRRDSRRKNYGGVYHLDNHHVHHANHH 287


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 41  TDRNVRSKCRCSNVSCSSHYDAQLTAFFIDP 133
           TDR +R+K     V C     A + + + DP
Sbjct: 74  TDRVIRAKLGKVGVHCMKTTQAVVVSLYEDP 104


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 200 RPHILSRTTDSNHYPGRWITWLAGR 126
           R  +L+ T + NH  G    W +GR
Sbjct: 250 RSRMLTATVNRNHLSGGTNHWDSGR 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,535
Number of Sequences: 438
Number of extensions: 4088
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)