BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12k17f (494 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 1.1 EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 1.5 AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 22 2.6 DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 3.5 >AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. Length = 790 Score = 23.4 bits (48), Expect = 1.1 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = -3 Query: 426 HMDTGGGDPGASGEDVSCAKSEGE 355 H+ + GGD S ++V K EG+ Sbjct: 3 HVSSSGGDDLGSTDEVKVFKDEGD 26 >EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 protein. Length = 535 Score = 23.0 bits (47), Expect = 1.5 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = -2 Query: 244 SQVQQDGGEHQRWRQNHPQSWYRRSQRL 161 S V D G + + H W+RR RL Sbjct: 2 SGVVGDAGRASKGQDKHMVHWFRRGLRL 29 >AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neuroblasts defectiveprotein protein. Length = 224 Score = 22.2 bits (45), Expect = 2.6 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +2 Query: 353 SSPSLLAQLTSSPEAPGSPPP 415 SSP L +++ SP P +P P Sbjct: 83 SSPILAEKVSVSPTTPPTPSP 103 >DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome adhesion molecule splicevariant 3.12.3.1 protein. Length = 1639 Score = 21.8 bits (44), Expect = 3.5 Identities = 8/20 (40%), Positives = 11/20 (55%) Frame = +2 Query: 353 SSPSLLAQLTSSPEAPGSPP 412 S PS + ++ E PG PP Sbjct: 980 SEPSETVTIITAEEVPGGPP 999 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.317 0.128 0.387 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 108,469 Number of Sequences: 336 Number of extensions: 2201 Number of successful extensions: 7 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 122,585 effective HSP length: 53 effective length of database: 104,777 effective search space used: 11630247 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.3 bits)
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