Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k17f
(494 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 44 9e-05
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 41 5e-04
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.001
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.003
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 38 0.005
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.006
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.008
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.008
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 37 0.008
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.014
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.014
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 36 0.014
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.014
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.018
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 36 0.018
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.018
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.024
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 36 0.024
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 36 0.024
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.024
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.074
SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.074
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.074
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.098
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.098
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.098
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 33 0.098
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.13
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 33 0.13
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 33 0.17
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 32 0.23
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.23
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 31 0.39
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.39
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.39
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 31 0.52
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 31 0.52
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_27649| Best HMM Match : ResIII (HMM E-Value=0.43) 29 2.8
SB_23746| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_41929| Best HMM Match : ResIII (HMM E-Value=1.5) 29 2.8
SB_23917| Best HMM Match : ketoacyl-synt (HMM E-Value=8.6) 29 2.8
SB_6028| Best HMM Match : LIM (HMM E-Value=0.22) 29 2.8
SB_49438| Best HMM Match : LIM (HMM E-Value=3.1) 28 3.7
SB_31605| Best HMM Match : ResIII (HMM E-Value=0.44) 28 3.7
SB_23273| Best HMM Match : ResIII (HMM E-Value=8.2) 28 3.7
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 28 3.7
SB_23438| Best HMM Match : zf-CCHC (HMM E-Value=0.00065) 28 3.7
SB_8850| Best HMM Match : LIM (HMM E-Value=0.51) 28 3.7
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 28 4.9
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_14541| Best HMM Match : ResIII (HMM E-Value=0.66) 28 4.9
SB_3895| Best HMM Match : ResIII (HMM E-Value=1.1) 28 4.9
SB_30355| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_28796| Best HMM Match : LIM (HMM E-Value=5.2) 27 6.4
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_47739| Best HMM Match : WCCH (HMM E-Value=3.5) 27 6.4
SB_27634| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 27 6.4
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 27 8.5
SB_12992| Best HMM Match : LIM (HMM E-Value=0.16) 27 8.5
SB_34925| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 43.6 bits (98), Expect = 9e-05
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRS-RDAQARQF 357
+RIVGG+ A G P A L+ G CG +L+ VTA+HC R +
Sbjct: 209 SRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDYKTH 268
Query: 358 TLAFGTAN---IFSGGTRVTTSSVHMHGSYNM 444
++ G N I S R+ + +++H YN+
Sbjct: 269 IISLGGHNKTGIMSVEQRIGIAKIYLHADYNL 300
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 43.6 bits (98), Expect = 9e-05
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFT 360
+RIVGGS A GA P V+ + N CG +L+T +TAAHC ++ + Q
Sbjct: 629 SRIVGGSTAPPGAWPWQ---VMLIYNSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQVR 685
Query: 361 LAF--GTANIFSGGTRVTTSSVHMHGSYNMNK 450
L T+ S R++ S+H H Y K
Sbjct: 686 LGAQDRTSPDPSVEMRISIRSIHNHPDYGSPK 717
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 41.5 bits (93), Expect = 4e-04
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFT 360
+R++GG A GA P IAL + ICG SL+++T VTAAHC +R + Q+
Sbjct: 475 SRVIGGKDAIPGAWPWQ----IALKSRGNFICGGSLVSSTWVVTAAHC-VARSSNPAQYQ 529
Query: 361 LAFGTAN 381
+ G N
Sbjct: 530 IIVGEHN 536
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 41.1 bits (92), Expect = 5e-04
Identities = 29/88 (32%), Positives = 40/88 (45%)
Frame = +1
Query: 175 DGTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQ 354
DG RIVGG A PH +++ + ICG SLL+ +TAAHC R +
Sbjct: 27 DGVRIVGGDEAV----PHSWPWQVSIRLKGSHICGGSLLSPLWLLTAAHC-VIRSNNSAD 81
Query: 355 FTLAFGTANIFSGGTRVTTSSVHMHGSY 438
+T+ G GT S+ + H Y
Sbjct: 82 YTVIVGAHKRVLDGTEHKLSTFYKHEKY 109
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGL--VIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQ 354
TRIVGG+ A GA P + V ICG S++ VTAAHC+ + A+
Sbjct: 102 TRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCF-AYSKDAKD 160
Query: 355 FTLAFG 372
+T+A G
Sbjct: 161 YTIAVG 166
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/87 (33%), Positives = 39/87 (44%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFTL 363
RIV G A PH ++ + ICGASLLT ++TAAHC D A +TL
Sbjct: 240 RIVNGE----DAVPHSWPWQLSFRYKGSHICGASLLTPGWALTAAHCLTLSD-DASDYTL 294
Query: 364 AFGTANIFSGGTRVTTSSVHMHGSYNM 444
G + G S + H ++M
Sbjct: 295 VAGAHQRENDGQVFGISKIRKHKGFSM 321
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
RIVGG A P AGL L + T +CG SL+ VTAAHC
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDD--TIVCGGSLINREWVVTAAHC 476
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC-WRSRDAQARQF 357
+RI+GG+ A P A ++I + CG +L+ VTAAHC +++ + +
Sbjct: 283 SRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCVFQNIEPSNYKI 342
Query: 358 TLAFGTANIFSGGTRVTTSSVHMH 429
L G + +++HMH
Sbjct: 343 KLGAHDRESSEGALTIPVTAIHMH 366
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSR 336
+RIVGG+AAN G P A L T G CG SL+ + +TAAHC S+
Sbjct: 389 SRIVGGAAANPGDWPWQAQL--RTTTG-FPYCGGSLIHSNWVLTAAHCISSK 437
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFT 360
+RIVGG A + P +++ N T CG SL+ +T++HC+ + + + QF
Sbjct: 244 SRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFE 303
Query: 361 LAFGTANI 384
+ G ++
Sbjct: 304 IRLGEHDV 311
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 327
RIVGG A AGA P LA + + + CG +L+ VTAAHC+
Sbjct: 723 RIVGGREAKAGAWPWLAAIYVK----GSFRCGGALIARDWVVTAAHCF 766
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 37.1 bits (82), Expect = 0.008
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = +1
Query: 166 ADFDGTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQ 345
A+ TR++ GS A G P A L + T ICG SL+ +TAAHC S DA
Sbjct: 25 AEVPATRVISGSEALLGEWPWQAWLHLQHTG---FICGGSLVAPGWVLTAAHCILSDDAS 81
Query: 346 ARQFTL 363
+ L
Sbjct: 82 KYKVVL 87
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 37.1 bits (82), Expect = 0.008
Identities = 26/56 (46%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC----WRSRD 339
RIVGG A GA P L L NG T CG SL+ VTA HC W S D
Sbjct: 53 RIVGGVEAAPGAWPWQVAL---LMNG-TQFCGGSLVNENWVVTARHCFHELWSSMD 104
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 37.1 bits (82), Expect = 0.008
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFTL 363
+IVGG GA P + T G ICG S++ + VTAAHC ++ A ++T+
Sbjct: 1782 QIVGGKVTEHGAWPWQVQIGYK-TMGH--ICGGSIVNSQWIVTAAHCVTTKPPGASRYTM 1838
Query: 364 -AFGTANIFSG 393
AF N+ G
Sbjct: 1839 YAFSDLNVTLG 1849
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 36.3 bits (80), Expect = 0.014
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 327
RIVGG + GA P A L + NG CG S++ + VTAAHC+
Sbjct: 26 RIVGGIESANGAWPWQAALFL---NGTHHRCGGSVIKSQWVVTAAHCF 70
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 36.3 bits (80), Expect = 0.014
Identities = 23/64 (35%), Positives = 30/64 (46%)
Frame = +1
Query: 247 ALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFTLAFGTANIFSGGTRVTTSSVHM 426
A NG ICG SLL++T +TAAHC R +T+ G GT S+ +
Sbjct: 332 ATLNGH-HICGGSLLSSTWVLTAAHC-VIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYK 389
Query: 427 HGSY 438
H Y
Sbjct: 390 HEKY 393
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 36.3 bits (80), Expect = 0.014
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQF 357
GTRI+ G A + P L + ++ CGASLL+ ++TAAHC + R + +
Sbjct: 83 GTRIINGEEAVPNSWPWQLSLRVYGSHN----CGASLLSPGWALTAAHCVQ-RSSNPADY 137
Query: 358 TLAFG 372
TLA G
Sbjct: 138 TLAAG 142
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 36.3 bits (80), Expect = 0.014
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQ-ARQFT 360
R+VGG A AG P IAL R CG +L+ VT AHC+ ++ R +
Sbjct: 28 RVVGGDEAKAGQFPWQ----IALLFKRQQYCGGALVHERWVVTGAHCFNPYTSEDPRDWN 83
Query: 361 LAFGTANI-----FSGGTRVTTSSVHMH 429
+ G N+ F V + +VH H
Sbjct: 84 VTLGEYNLAVNESFEQRRGVKSITVHEH 111
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 35.9 bits (79), Expect = 0.018
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSR 336
RIVGG A+ + P LV+ NG CG SL+ VT+ HC+ R
Sbjct: 249 RIVGGREASPNSWPWQVDLVV---NGTRHNCGGSLIDKQWVVTSGHCFDQR 296
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 238 LVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFTLAFG 372
+++ N T CG SL+ +T++HC+ + + + QF + G
Sbjct: 3 IILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLG 47
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 35.9 bits (79), Expect = 0.018
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
GTRIVGG+ A P A L A G + CG SL+ +TAAHC
Sbjct: 257 GTRIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHC 302
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 35.9 bits (79), Expect = 0.018
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
GTRIVGG+ A P A L A G + CG SL+ +TAAHC
Sbjct: 217 GTRIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHC 262
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 35.5 bits (78), Expect = 0.024
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSR 336
TRIVGG+AA G P A L T+G CG SL+ +TA HC SR
Sbjct: 662 TRIVGGTAAKQGDWPWQAQL--RSTSG-FPFCGGSLIHPQWVLTATHCVSSR 710
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 244 IALTNGRTSICGASLLTNTRSVTAAHC 324
IAL + ICG SL++ T VTAAHC
Sbjct: 83 IALERSGSFICGGSLVSPTWVVTAAHC 109
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 35.5 bits (78), Expect = 0.024
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNG-RTSICGASLLTNTRSVTAAHCW 327
RIVGG+ A G P G+ +G + ICG +L+ +TAAHC+
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHCF 174
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 35.5 bits (78), Expect = 0.024
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFT 360
TRIVGG+AA G P A L T CG SL+ +TA HC + A +
Sbjct: 9 TRIVGGTAAKHGDWPWQAQL---RTTSGFPYCGGSLIAPQWILTATHCVERKQASSIVIR 65
Query: 361 LAFGTANIFSGGTR--VTTSSVHMHGSYNMNK 450
L + + GT + V H SY+ K
Sbjct: 66 LG-ARRRVATVGTEKDYIVTKVITHPSYHKPK 96
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 35.5 bits (78), Expect = 0.024
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
G RIV G A + + P +A L +N T CGA+L+ ++TAAHC
Sbjct: 323 GARIVNGQEAVSHSWPWIASLRKGRSNYHT--CGATLIRPGWAITAAHC 369
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTN-GRTSICGASLLTNTRSVTAAHC 324
G R++ G A PH I+L GR CG +L+++ VTA+HC
Sbjct: 27 GARVINGQ----NAQPHSWPWQISLRPYGRYHSCGGTLISDRWVVTASHC 72
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 33.9 bits (74), Expect = 0.074
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
G+RIVGG+ A P A +++ NG CG SL+ +TAAHC
Sbjct: 27 GSRIVGGTEAPINGWPWQA-MLLRSPNG-DQFCGGSLIDPGWVLTAAHC 73
>SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 33.9 bits (74), Expect = 0.074
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 90 FCHDHGRQRHQYCCEDLHGYYQLQVPSSRI 1
FCH H R CC+DL Y + +PS+ I
Sbjct: 603 FCHIHPTDRFAVCCKDLLSSYTILIPSNGI 632
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 33.9 bits (74), Expect = 0.074
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
TRIVGG+ A GA P A L +N CG +L+ +TAAHC
Sbjct: 138 TRIVGGTKAPPGAWPWQAML---RSNYGGQFCGGTLVHPQWVITAAHC 182
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 33.5 bits (73), Expect = 0.098
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
+RIVGG+ A GA P A ++ NG CG +L+ VTA+HC
Sbjct: 247 SRIVGGTTAQRGAWPWQA--MLRYYNG-NHFCGGTLVHPRWVVTASHC 291
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 33.5 bits (73), Expect = 0.098
Identities = 22/88 (25%), Positives = 36/88 (40%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFTL 363
RI+GG + HP + +++ CG SL+ VTAAHC+ D+ ++ +
Sbjct: 40 RIMGGQRSTIEQHPWMVAMML----DSAQACGGSLVPEDWIVTAAHCF---DSNRLRWRV 92
Query: 364 AFGTANIFSGGTRVTTSSVHMHGSYNMN 447
G S++ H Y N
Sbjct: 93 VAGNDMPSKAVNTTGVSAIWRHPQYKSN 120
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 33.5 bits (73), Expect = 0.098
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 187 IVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFTLA 366
I+GG+ A G P + + ++ ICG ++++ +TAAHC +D +A L
Sbjct: 546 IMGGANAEHGEWPWQVSMKLN-SSSLPHICGGNVISPWWVLTAAHCV--QDERASNIKLT 602
Query: 367 FGTANIFS-GGTR--VTTSSVHMHGSYNMN 447
G +F+ GT + + H +Y+ N
Sbjct: 603 MGEWRLFNVDGTEQVIPVERIISHANYSYN 632
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 33.5 bits (73), Expect = 0.098
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQA 348
TRIVGG+AA + P A L T CG SL+ +TA HC + A +
Sbjct: 52 TRIVGGTAAKQNSWPWQAQL---RTTSGFPYCGGSLIHPQWILTATHCVSGKSASS 104
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 33.1 bits (72), Expect = 0.13
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFT 360
+R+V G A + P L + NGR ICG SL+ VTAAHC R+ +T
Sbjct: 30 SRVVNGDNAQQHSWPWQISLRV---NGR-HICGGSLIAKDWVVTAAHC-VDRNPTPSGYT 84
Query: 361 LAFGTANIFSGGTRV 405
+ G A+ +G T V
Sbjct: 85 VVVG-AHHRTGNTPV 98
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
GTRI+ GS A + P + + I NG CG +L++ VTAAHC
Sbjct: 349 GTRIISGSDAQPNSWPWM--VQINYNNGHH--CGGTLVSPQWVVTAAHC 393
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
+R++GG AA + P ++++ G+ CG +L+++ +TAAHC
Sbjct: 475 SRVIGGEAARPYSWPWQ----VSVSMGKLHSCGGALISSKWVITAAHC 518
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 33.1 bits (72), Expect = 0.13
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRT-SICGASLLTNTRSVTAAHC 324
G RI+ G A PH I+L GR +CG +L+++ VTA+HC
Sbjct: 843 GARIINGQ----NAQPHSWPWQISLRQGRRFHLCGGALISDRWVVTASHC 888
Score = 30.3 bits (65), Expect = 0.91
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQF 357
G R++GG A PH I+L +CG +L++ +TA HC + +
Sbjct: 433 GARVIGGE----DAAPHSWPWQISLRVRGKHMCGGTLISPDWVLTAGHCVHGQ-LDPSGY 487
Query: 358 TLAFGTAN 381
T+ GT N
Sbjct: 488 TVVVGTLN 495
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 32.7 bits (71), Expect = 0.17
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
+R+V G+ A A P L TNG+ ICG SL+T +TAAHC
Sbjct: 36 SRVVNGANAPQHAWPWQISL---RTNGQ-HICGGSLITPEWVLTAAHC 79
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 32.3 bits (70), Expect = 0.23
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFT 360
+ I+GG+ A G P L + +CG +LLT+ +TAA C+R + +A ++
Sbjct: 256 SNIIGGTDAAVGEWPWQVSLYLTHYG---PVCGGTLLTSEWVLTAARCFRD-NKRAGEWK 311
Query: 361 LAFGTANIF 387
+ G + +
Sbjct: 312 VILGETDFY 320
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.3 bits (70), Expect = 0.23
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSI--CGASLLTNTRSVTAAHCWRSRDAQAR 351
G RI+ G A PH I+L GR+ CG SL+++ VTAAHC R+
Sbjct: 103 GARIINGQ----NAQPHSWPWQISL-RGRSGFHTCGGSLISDRWVVTAAHCIH-RNKNPG 156
Query: 352 QFTLAFGTANIFSGGTRVTTS 414
+T+ G A+ G T V S
Sbjct: 157 GYTVVVG-AHKKRGSTSVQQS 176
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.9 bits (69), Expect = 0.30
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRD 339
RIVGG GA+P + + G CG SL++ +TAAHC R+
Sbjct: 107 RIVGGHDTVKGAYPWH----VLIRKGGHVACGGSLISEKWVLTAAHCVTHRN 154
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 31.5 bits (68), Expect = 0.39
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
TRIVGG+AA A P A L A CG +L+ VTA+HC
Sbjct: 22 TRIVGGTAAPKNAWPWQAQLRSA---SGFPFCGGTLVHPRFVVTASHC 66
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 31.5 bits (68), Expect = 0.39
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIAL--TNGRTSICGASLLTNTRSVTAAHCWRSRDA 342
RI GGS + G +P L +N T CG +L+ +TAAHC +D+
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCVVYKDS 1214
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 31.5 bits (68), Expect = 0.39
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
+R+V G A + P L + NGR ICG SL+T +TAAHC
Sbjct: 79 SRVVNGDNAAQHSWPWQISLRV---NGR-HICGGSLITPEWVLTAAHC 122
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 31.1 bits (67), Expect = 0.52
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRT-SICGASLLTNTRSVTAAHCWRSRDAQARQF 357
+R++ G A A A P L + G CG SL+ + +TAAHC + R++
Sbjct: 36 SRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHC-VAGIRNPRRY 94
Query: 358 TLAFGTANIFSGGT----RVTTSSVHMHGSYN 441
++ G A+ G T +++ S ++ H Y+
Sbjct: 95 SVYVG-AHELDGTTQVEEKISISKIYSHEKYS 125
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 31.1 bits (67), Expect = 0.52
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQA 348
RIVGG ++ G P L++ N R +C SL+ +TA HC++ + A
Sbjct: 53 RIVGGVVSSEGLWPWQVALLL---NDR-QVCAGSLIEARWIITAGHCFKDPRSSA 103
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 30.7 bits (66), Expect = 0.69
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +1
Query: 166 ADFDGTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQ 345
+D +R+V G A G P A L + +G +CG SL+ +TA HC + D +
Sbjct: 55 SDSASSRVVSGDDATLGEWPWQAWLHVT-PHG--FVCGGSLIAPQWVLTAGHCILTEDPE 111
Query: 346 ARQFTL 363
+ L
Sbjct: 112 KYRVVL 117
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 238 LVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFTLAFGTANI---FSGGTRVT 408
+ + L+ CG +L+ +TAAHC+ R + ++T+ G +++ G ++
Sbjct: 1254 VALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSLS 1312
Query: 409 TSSVHMHGSYN 441
++ +H YN
Sbjct: 1313 IKAIFVHPQYN 1323
>SB_27649| Best HMM Match : ResIII (HMM E-Value=0.43)
Length = 802
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRC--SLLEVQGCPGSSVH 359
D EW N+ F +D H LC+ C + G P S +H
Sbjct: 747 DMLEEWAQGNICWFESDYHCLCEDCGTAYSTCDGLPSSRLH 787
>SB_23746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRCS--LLEVQGCPGSSVH 359
D EW N+R F +D LC+ C G P S +H
Sbjct: 463 DMLEEWAQGNIRWFESDYRRLCEDCGKPYSTCDGLPSSRLH 503
>SB_41929| Best HMM Match : ResIII (HMM E-Value=1.5)
Length = 773
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRC--SLLEVQGCPGSSVH 359
D EW N+ F +D H LC+ C + G P S +H
Sbjct: 718 DMLEEWAQGNICWFESDYHCLCEDCGTAYSTCDGLPSSRLH 758
>SB_23917| Best HMM Match : ketoacyl-synt (HMM E-Value=8.6)
Length = 906
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRC--SLLEVQGCPGSSVH 359
D EW N+R F +D LC+ C + G P S +H
Sbjct: 672 DMLEEWAQGNIRWFESDYRCLCEDCGKTYSTCDGLPSSRLH 712
>SB_6028| Best HMM Match : LIM (HMM E-Value=0.22)
Length = 968
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRC--SLLEVQGCPGSSVH 359
D EW N+R F +D LC+ C + G P S +H
Sbjct: 606 DMLEEWAQGNIRWFESDYRCLCEDCGKTYSTCDGLPSSRLH 646
>SB_49438| Best HMM Match : LIM (HMM E-Value=3.1)
Length = 355
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRCS--LLEVQGCPGSSVH 359
D EW N+R F ++ LC+ C G P S VH
Sbjct: 277 DMLEEWAQGNIRWFESNYRCLCEECGKPYSTCDGLPSSRVH 317
>SB_31605| Best HMM Match : ResIII (HMM E-Value=0.44)
Length = 488
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRC 317
D EW N+RSF +D LC+ C
Sbjct: 246 DMLKEWAQGNIRSFESDYRCLCEDC 270
>SB_23273| Best HMM Match : ResIII (HMM E-Value=8.2)
Length = 288
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRCS--LLEVQGCPGSSVH 359
D EW N+R F +D LC+ C G P S +H
Sbjct: 174 DMLEEWAQGNIRWFESDYRCLCEDCGKPYSTCDGLPSSRLH 214
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRC 317
D EW N+RSF +D LC+ C
Sbjct: 1012 DMLKEWAQGNIRSFESDYRCLCEDC 1036
>SB_23438| Best HMM Match : zf-CCHC (HMM E-Value=0.00065)
Length = 1275
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRCS--LLEVQGCPGSSVH 359
D EW N+R F ++ LC+ C G P S VH
Sbjct: 587 DMLEEWAQGNIRWFESNYRCLCEECGKPYSTCDGLPSSRVH 627
>SB_8850| Best HMM Match : LIM (HMM E-Value=0.51)
Length = 1039
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRCS--LLEVQGCPGSSVH 359
D EW N+R F +D LC+ C G P S +H
Sbjct: 727 DMLEEWAQGNIRWFESDYRCLCEDCGKPYSTCDGLPSSRLH 767
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
R+V GS + P L+ + CG +L+ VTAAHC
Sbjct: 43 RVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHC 89
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 216 CSPPSCWTCDRTHEWQNFNLRSFLTDQHPLCDRC 317
C+ P CW +TH N + R ++ C +C
Sbjct: 980 CNEPECWKTFKTHTNLNLHSRVHANEKPYHCKKC 1013
>SB_14541| Best HMM Match : ResIII (HMM E-Value=0.66)
Length = 822
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRCS--LLEVQGCPGSSVH 359
D EW N+R F +D LC+ C G P S +H
Sbjct: 644 DMLEEWAQENIRWFDSDYRCLCEDCGKPYSTCDGLPSSRLH 684
>SB_3895| Best HMM Match : ResIII (HMM E-Value=1.1)
Length = 1115
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRC 317
D EWQ N+R F +D LC+ C
Sbjct: 843 DMLKEWQQGNIRWFESDYRCLCEDC 867
>SB_30355| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRCSLLEVQGCPGSSVHP 362
D EW N+R F +D LC+ C + C SV P
Sbjct: 890 DMLKEWAQGNIRWFESDYRCLCEDCG-IPYSTCDCGSVAP 928
>SB_28796| Best HMM Match : LIM (HMM E-Value=5.2)
Length = 625
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRC 317
D EW +N+R F +D LC+ C
Sbjct: 372 DMLEEWAQWNIRWFESDYRCLCEDC 396
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 441 VVAAVHMDTGGGDPGASGEDVSCAKSEGELTSLGIPGP 328
V+ + + G G P + E ++ ++GE G+PGP
Sbjct: 3242 VLVLAYSNNGNGIPSRASEAITGEGAKGEKGDRGLPGP 3279
>SB_47739| Best HMM Match : WCCH (HMM E-Value=3.5)
Length = 932
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRC 317
D EW +N+R F +D LC+ C
Sbjct: 679 DMLEEWAQWNIRWFESDYRCLCEDC 703
>SB_27634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 240 KSSKMGVSTSVGGRTTHNPGTVEVSGFLGALKTLGPG 130
KSSK S+S TTH P V + T GPG
Sbjct: 61 KSSKSSKSSSTSSSTTHGPTPVPATPSSPPRPTPGPG 97
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 255 RECDHKSSKMGVSTSVGGRTTHNPGTVEVSGF 160
R+CD +S S TTH G +++GF
Sbjct: 270 RDCDDSASSTSDKESAPDETTHASGNTKLTGF 301
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 27.1 bits (57), Expect = 8.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 93 LFCHDHGRQRHQYCCE 46
+FC DHG ++ +Y CE
Sbjct: 283 IFCSDHGHEKLRYFCE 298
>SB_12992| Best HMM Match : LIM (HMM E-Value=0.16)
Length = 411
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 DRTHEWQNFNLRSFLTDQHPLCDRCS--LLEVQGCPGSSVH 359
D EW N+R F D LC+ C G P S +H
Sbjct: 111 DMLEEWAQGNIRWFGPDYRCLCEDCGKPYSTCDGLPSSRLH 151
>SB_34925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +1
Query: 238 LVIALTNGRTSICGASLLTNTRSVTAAHCWRSRDAQARQFTLAFGTANIFSGGTRVTTSS 417
+++ + + + A+ T TR++ C+R +++ T + SG V ++
Sbjct: 3 VLMLYSKSKQRLKSAAFCTFTRTIQHYDCFRQSTRMRIRYSWVSVTRELTSGEEVVVKTA 62
Query: 418 VHMHGSY 438
HGSY
Sbjct: 63 TREHGSY 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.128 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,954,219
Number of Sequences: 59808
Number of extensions: 286479
Number of successful extensions: 3187
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 3008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3173
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1062812967
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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