Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k17f
         (494 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    36   2e-04
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   3.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   4.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   4.1  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.2  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   9.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 35.9 bits (79), Expect = 2e-04
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +1

Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
           +RIVGG+       P +AG+      G   ICGA++++    +TAAHC
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGM--ICGATIISKRYVLTAAHC 204


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +3

Query: 195 WFCRQRWCSPPSCWTCDRTHE 257
           W CR ++    S W  D  H+
Sbjct: 926 WSCRCKFLQELSSWVSDNAHK 946


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 113 TPRSVSPGPRVLSAPRKPLTS 175
           T  S SP PR+ SAP    +S
Sbjct: 507 TNSSPSPNPRIASAPSSSTSS 527


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 393 SGEDVSCAKSEGELTSLGIPG 331
           +G D+S   + GE   LG+PG
Sbjct: 184 AGGDISSFITNGEWDLLGVPG 204


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +3

Query: 231 CWTCDRTHEWQ 263
           CW CD+  E++
Sbjct: 467 CWVCDQCEEYE 477


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +3

Query: 231 CWTCDRTHEWQ 263
           CW CD+  E++
Sbjct: 557 CWVCDQCEEYE 567


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = +3

Query: 192 GWFCRQRW 215
           GW C  RW
Sbjct: 377 GWICEHRW 384


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = +2

Query: 62  WRWRPWSWQKR 94
           W W P  W +R
Sbjct: 176 WIWTPHGWMRR 186


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 353  SSPSLLAQLTSSPEAPGSPP 412
            S PS    + ++ EAP  PP
Sbjct: 961  SDPSDTVTIITAEEAPSGPP 980


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.128    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,923
Number of Sequences: 438
Number of extensions: 2420
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)