BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12k16f (644 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AM712903-1|CAN84642.1| 148|Tribolium castaneum hypothetical pro... 25 0.71 AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 24 1.2 AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 1.6 AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 1.6 AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 1.6 AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 23 2.8 AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 22 3.8 AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 22 3.8 AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 21 6.6 AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 21 8.7 AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 21 8.7 AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 21 8.7 AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 21 8.7 AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 21 8.7 >AM712903-1|CAN84642.1| 148|Tribolium castaneum hypothetical protein protein. Length = 148 Score = 24.6 bits (51), Expect = 0.71 Identities = 12/45 (26%), Positives = 24/45 (53%) Frame = +2 Query: 299 TGNTGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNN 433 T + + +N GE ++I+C G G + N + + T +C++N Sbjct: 3 TAGSKVVEINNGETIIISCPG-GFVMEDANNLTQSTILT-TCESN 45 >AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH transcription factor protein. Length = 193 Score = 23.8 bits (49), Expect = 1.2 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = -1 Query: 323 DESDLYYQLDLNNFLCGYIQVEADQD 246 +E L+Y+ + +F+ YI+VEAD++ Sbjct: 29 EEPPLFYE-ERPDFVAPYIKVEADEE 53 >AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase protein. Length = 677 Score = 23.4 bits (48), Expect = 1.6 Identities = 6/17 (35%), Positives = 8/17 (47%) Frame = +3 Query: 69 HCPPNFERIYQSQDNWL 119 HCP F Y + W+ Sbjct: 605 HCPEGFNEFYNQRRRWM 621 >AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase protein. Length = 1464 Score = 23.4 bits (48), Expect = 1.6 Identities = 6/17 (35%), Positives = 8/17 (47%) Frame = +3 Query: 69 HCPPNFERIYQSQDNWL 119 HCP F Y + W+ Sbjct: 838 HCPEGFNEFYNQRRRWM 854 >AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2 protein. Length = 1464 Score = 23.4 bits (48), Expect = 1.6 Identities = 6/17 (35%), Positives = 8/17 (47%) Frame = +3 Query: 69 HCPPNFERIYQSQDNWL 119 HCP F Y + W+ Sbjct: 838 HCPEGFNEFYNQRRRWM 854 >AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 protein protein. Length = 301 Score = 22.6 bits (46), Expect = 2.8 Identities = 12/45 (26%), Positives = 19/45 (42%) Frame = +3 Query: 144 KTTSMPISLFNNLKCSPIKPGMISEAVAHSESTVILVSLNLYIST 278 KT+ P+S+ NN S A H + + L++ST Sbjct: 153 KTSPTPVSINNNTSTSSSASSPSVTAAPHLRDSPNYIKPQLHVST 197 >AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane transporter protein. Length = 669 Score = 22.2 bits (45), Expect = 3.8 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +2 Query: 386 NVASNLAVGTVSCQNNNLVTANWLRGNSAFGQ 481 + +SNL V + C N V++ L SA+ Q Sbjct: 127 HTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQ 158 >AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane transporter white protein. Length = 669 Score = 22.2 bits (45), Expect = 3.8 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +2 Query: 386 NVASNLAVGTVSCQNNNLVTANWLRGNSAFGQ 481 + +SNL V + C N V++ L SA+ Q Sbjct: 127 HTSSNLTVSGLRCVNGIPVSSKTLASQSAYVQ 158 >AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein protein. Length = 203 Score = 21.4 bits (43), Expect = 6.6 Identities = 10/37 (27%), Positives = 18/37 (48%) Frame = +1 Query: 349 RLHRIRPYDPSPQCCF*PCCRDGQLSKQ*SRHSQLAA 459 R H PY P + P C+ +S S +S++++ Sbjct: 22 RPHSPEPYPPRCPPIYEPSCQYSPVSNSDSENSEVSS 58 >AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase protein. Length = 533 Score = 21.0 bits (42), Expect = 8.7 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +2 Query: 542 NHFVIRVGFIVNKCILSSIL 601 NH I +G+ + ILS +L Sbjct: 307 NHVPIMIGYTTREGILSEVL 326 >AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase protein. Length = 533 Score = 21.0 bits (42), Expect = 8.7 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +2 Query: 542 NHFVIRVGFIVNKCILSSIL 601 NH I +G+ + ILS +L Sbjct: 307 NHVPIMIGYTTREGILSEVL 326 >AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase protein. Length = 533 Score = 21.0 bits (42), Expect = 8.7 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +2 Query: 542 NHFVIRVGFIVNKCILSSIL 601 NH I +G+ + ILS +L Sbjct: 307 NHVPIMIGYTTREGILSEVL 326 >AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase protein. Length = 510 Score = 21.0 bits (42), Expect = 8.7 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +2 Query: 542 NHFVIRVGFIVNKCILSSIL 601 NH I +G+ + ILS +L Sbjct: 307 NHVPIMIGYTTREGILSEVL 326 >AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase protein. Length = 509 Score = 21.0 bits (42), Expect = 8.7 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +2 Query: 542 NHFVIRVGFIVNKCILSSIL 601 NH I +G+ + ILS +L Sbjct: 306 NHVPIMIGYTTREGILSEVL 325 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 148,692 Number of Sequences: 336 Number of extensions: 3220 Number of successful extensions: 15 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 16552695 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -