BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12k16f (644 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical pr... 28 4.9 Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 28 6.5 Z49207-4|CAA89073.1| 195|Caenorhabditis elegans Hypothetical pr... 28 6.5 AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 28 6.5 U64599-11|ABD94099.1| 324|Caenorhabditis elegans Regulator of g... 27 8.6 U64599-10|AAL11463.1| 424|Caenorhabditis elegans Regulator of g... 27 8.6 U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g ... 27 8.6 U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g ... 27 8.6 AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein. 27 8.6 AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protei... 27 8.6 >U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical protein F18E9.3 protein. Length = 378 Score = 28.3 bits (60), Expect = 4.9 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = +2 Query: 254 QPQPVYIHRGNYLSPTGN 307 QP+PV IH G Y PT N Sbjct: 296 QPKPVVIHTGRYSGPTYN 313 >Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical protein F08G12.10 protein. Length = 419 Score = 27.9 bits (59), Expect = 6.5 Identities = 11/21 (52%), Positives = 18/21 (85%) Frame = +2 Query: 542 NHFVIRVGFIVNKCILSSILV 604 N+F++++GFIVN CIL +L+ Sbjct: 185 NYFLLKLGFIVN-CILQMVLL 204 >Z49207-4|CAA89073.1| 195|Caenorhabditis elegans Hypothetical protein R07E3.7 protein. Length = 195 Score = 27.9 bits (59), Expect = 6.5 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -3 Query: 414 VPTARLEATLG*RIVRPDPVQAIRTCSPRLR 322 +PT R E+T+G R P+P+ I T SP R Sbjct: 39 LPT-RAESTIGIRPKIPNPIYTINTASPETR 68 >AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. Length = 419 Score = 27.9 bits (59), Expect = 6.5 Identities = 11/21 (52%), Positives = 18/21 (85%) Frame = +2 Query: 542 NHFVIRVGFIVNKCILSSILV 604 N+F++++GFIVN CIL +L+ Sbjct: 185 NYFLLKLGFIVN-CILQMVLL 204 >U64599-11|ABD94099.1| 324|Caenorhabditis elegans Regulator of g protein signalingprotein 7, isoform e protein. Length = 324 Score = 27.5 bits (58), Expect = 8.6 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = +2 Query: 155 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 316 D Y + S+M T N D+ S + NG G P+ + +HR S T T + Sbjct: 18 DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 72 >U64599-10|AAL11463.1| 424|Caenorhabditis elegans Regulator of g protein signalingprotein 7, isoform c protein. Length = 424 Score = 27.5 bits (58), Expect = 8.6 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = +2 Query: 155 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 316 D Y + S+M T N D+ S + NG G P+ + +HR S T T + Sbjct: 118 DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 172 >U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g protein signalingprotein 7, isoform b protein. Length = 782 Score = 27.5 bits (58), Expect = 8.6 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = +2 Query: 155 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 316 D Y + S+M T N D+ S + NG G P+ + +HR S T T + Sbjct: 476 DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 530 >U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g protein signalingprotein 7, isoform a protein. Length = 819 Score = 27.5 bits (58), Expect = 8.6 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = +2 Query: 155 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 316 D Y + S+M T N D+ S + NG G P+ + +HR S T T + Sbjct: 513 DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 567 >AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein. Length = 819 Score = 27.5 bits (58), Expect = 8.6 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = +2 Query: 155 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 316 D Y + S+M T N D+ S + NG G P+ + +HR S T T + Sbjct: 513 DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 567 >AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protein protein. Length = 782 Score = 27.5 bits (58), Expect = 8.6 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = +2 Query: 155 DAYLALQQSEMLANQTRN--DFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQ 316 D Y + S+M T N D+ S + NG G P+ + +HR S T T + Sbjct: 476 DYYRSTGSSDMRGRSTNNLLDYTSASS-STNGSAGGPEKLKLHRATLPSITTTTSE 530 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,758,303 Number of Sequences: 27780 Number of extensions: 311875 Number of successful extensions: 940 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 871 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 940 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1423653030 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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