BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12k15f (519 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0204 + 1539859-1540158 30 0.97 04_04_1110 + 30973202-30973870 29 2.2 01_06_1057 - 34142979-34143114,34143212-34143390,34143496-341436... 29 2.2 01_06_0034 + 25769436-25769701,25769749-25769887 29 2.2 05_04_0307 + 20066169-20066410,20066803-20066858,20067490-200675... 28 3.9 12_02_0959 + 24818310-24818369,24818689-24819136,24819265-248194... 27 6.8 01_06_0926 + 33075575-33076618 27 6.8 05_06_0110 + 25632514-25632834,25633200-25634039 27 9.0 03_06_0729 - 35771936-35772050,35772469-35772995 27 9.0 03_05_0642 - 26346260-26346367,26347902-26348162,26348542-263498... 27 9.0 >12_01_0204 + 1539859-1540158 Length = 99 Score = 30.3 bits (65), Expect = 0.97 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 Query: 202 YAGSWSPPGASDIINFSGRVTDVKADD 282 +AGSW+ G + +F GRVT V+ D Sbjct: 38 HAGSWNGEGQGGLAHFGGRVTRVRRGD 64 >04_04_1110 + 30973202-30973870 Length = 222 Score = 29.1 bits (62), Expect = 2.2 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = -2 Query: 518 IAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEP 369 + +P S T+ S+R+T A A ++A P + L L M +A+P Sbjct: 105 VVSPTSSTVESSSRDTPAAAPVAAAAKAQVPASPSLDLSLGMSAMVAAQP 154 >01_06_1057 - 34142979-34143114,34143212-34143390,34143496-34143669, 34143757-34144005,34144108-34144233,34144341-34144565, 34144657-34144747,34144837-34144951,34145312-34145366 Length = 449 Score = 29.1 bits (62), Expect = 2.2 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -2 Query: 86 CGTADTQARARAKMKAFIVDWIL 18 C DTQ +KM+A + DWI+ Sbjct: 210 CDYIDTQVEINSKMRAILADWII 232 >01_06_0034 + 25769436-25769701,25769749-25769887 Length = 134 Score = 29.1 bits (62), Expect = 2.2 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = -1 Query: 507 DVTDNDVVCEGDGSGSXSNDVLKGKSSGSERPQDAAE 397 +V +D +C+G+G G + G ++ RPQ A E Sbjct: 16 EVESSDTICQGEGPGEGGHPDPAGPAAALLRPQVAGE 52 >05_04_0307 + 20066169-20066410,20066803-20066858,20067490-20067581, 20068400-20068502,20068623-20068760,20068898-20069148 Length = 293 Score = 28.3 bits (60), Expect = 3.9 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +1 Query: 88 RDVDFEPNSQRILDIVISNLFNEIGELLRAAD 183 RDV+ PN + + D+ N +E+ ELL+ AD Sbjct: 219 RDVELSPNPEEVADVKYVNR-DELKELLKKAD 249 >12_02_0959 + 24818310-24818369,24818689-24819136,24819265-24819482, 24819651-24819929 Length = 334 Score = 27.5 bits (58), Expect = 6.8 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%) Frame = -1 Query: 507 DVTDNDVV---CEGDGSGSXSNDVLKGKSSGSER 415 ++ +ND++ C G G+GS S DVL +SG E+ Sbjct: 73 ELQENDLLFFTCNGHGNGSCSFDVLIFDASGCEK 106 >01_06_0926 + 33075575-33076618 Length = 347 Score = 27.5 bits (58), Expect = 6.8 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Frame = -1 Query: 492 DVVCEGDGSGSXSNDVLKGKSSGSERPQDAAENAD---FSFSGTD*C*NSGNSQD*VESG 322 D +C GDG G+ D L+G GS + AD G+D G D V G Sbjct: 38 DPIC-GDGGGA---DQLRGNGGGSNAARGDGGGADPVRGGAGGSDAARGDGGGADPVRGG 93 Query: 321 ADVADTTQMQG 289 A +D + G Sbjct: 94 AGGSDAARGDG 104 >05_06_0110 + 25632514-25632834,25633200-25634039 Length = 386 Score = 27.1 bits (57), Expect = 9.0 Identities = 20/68 (29%), Positives = 30/68 (44%) Frame = -2 Query: 377 AEPTDAETLGTARTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDAPGGLQEPA*P 198 A PT+A G AR+K SRV + L S P ++S + G PA P Sbjct: 164 ALPTEAPVPGKARSKRSRVAPCSWSSRLMVLPPPP-ASPPSPASAVISPSESGTAAPAFP 222 Query: 197 SRRRGSAA 174 +++ +A Sbjct: 223 AKKAAKSA 230 >03_06_0729 - 35771936-35772050,35772469-35772995 Length = 213 Score = 27.1 bits (57), Expect = 9.0 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = +1 Query: 40 AFIFALALACVSAVPHRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWS 219 A + +L + + A+P P+S D ++ L N+I A D LRR S+S Sbjct: 2 AHVLSLLVVILVAIPSSRSHALPSSSSPFDAALATLQNQIAYRFHAPDLLRRAMTHASYS 61 >03_05_0642 - 26346260-26346367,26347902-26348162,26348542-26349849, 26349960-26350178,26350241-26350300,26352159-26352215, 26352945-26353029,26353486-26353843,26353931-26355170 Length = 1231 Score = 27.1 bits (57), Expect = 9.0 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +1 Query: 16 ERIQSTMKAFIFALALACVSAVPHRDVDFEPNSQR 120 +RIQ +KAF AL VPHRD P R Sbjct: 596 QRIQEGLKAFKNDWALVWRFVVPHRDPSLLPRQWR 630 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,617,655 Number of Sequences: 37544 Number of extensions: 243267 Number of successful extensions: 771 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 747 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 771 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1130733700 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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