Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k13r
         (710 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    90   1e-18
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    85   4e-17
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    51   7e-07
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    32   0.47 
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    30   1.4  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 90.2 bits (214), Expect = 1e-18
 Identities = 71/206 (34%), Positives = 92/206 (44%), Gaps = 9/206 (4%)
 Frame = -3

Query: 612 CGSSILNNRSVLTAAHCIIDDAVGV-WRVRVGSTWGNSGGVVHHVNRHIIHPNYG-RWSR 439
           CG S+++   VLTAAHC   D     + VRVG     SG   H V    IHP Y   +  
Sbjct: 84  CGGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGGHRSGSGS-PHRVTAVSIHPWYNIGFPS 142

Query: 438 DNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLS-EQLRHV 262
             D AIMR    +N  +   +P  +P  +    +N++    GWG T  G SLS   LR +
Sbjct: 143 SYDFAIMRIHPPVN-TSTTARPICLP--SLPAVENRLCVVTGWGSTIEGSSLSAPTLREI 199

Query: 261 QVWVVNQSVCRS--RYGGNTITNNMLCAGWLDVGGRDSCTGDSGGPLY----HXXXXXXX 100
            V +++   C S   Y G     +MLCAG+   G  DSC GDSGGPL             
Sbjct: 200 HVPLLSTLFCSSLPNYIGRIHLPSMLCAGY-SYGKIDSCQGDSGGPLMCARDGHWELTGV 258

Query: 99  XXXXXNCGHARYPGVYARVSRYTSWI 22
                 C     PGVY  V   ++WI
Sbjct: 259 VSWGIGCARPGMPGVYGNVHSASTWI 284


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 85.4 bits (202), Expect = 4e-17
 Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
 Frame = -3

Query: 636 NWSTWSQNCGSSILNNRSVLTAAHCI-IDDAVGVWRVRVGSTWGNS----GGVVHHVNRH 472
           N +T + +CG+SIL+   ++TAAHC   D+ V  + V VG  W N+       + ++ R 
Sbjct: 46  NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGD-WDNNQTDGNEQIFYLQRI 104

Query: 471 IIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFG 292
             +P Y +    +DIAI+         N   QP  +P  ++     +    +GWG    G
Sbjct: 105 HFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWG--SMG 161

Query: 291 GSLSEQLRHVQVWVVNQSVC-RSRYGGNTITNNMLCAGWLDVGGRDSCTGDSGGPLY--- 124
              +E+L+   + ++N+  C  S    ++++ +  CAG+L+ GG DSC GDSGGP     
Sbjct: 162 LRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLE-GGIDSCQGDSGGPFACRR 220

Query: 123 --HXXXXXXXXXXXXNCGHARYPGVYARVSRYTSWIQS 16
                           C   + PG+Y  V+ Y SWI +
Sbjct: 221 EDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISA 258


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
 Frame = -3

Query: 612 CGSSILNNRSVLTAAHCIIDDAVGVWRVRVGSTWGNSGGVVHHVNRHIIHPNYGRWSRDN 433
           CG++++++  ++TAAHC +      + V V     N+      V    IH  Y   + DN
Sbjct: 66  CGATVIDDFWLVTAAHCALQLQTRSF-VYVREP-KNNRERSFSVKEAYIHSGYNNQTADN 123

Query: 432 DIAIMRTSSNINYVNNAVQPARIPGSNYNL---GDNQVVWAAGWGVTRFGGSL------- 283
           DIA++R SS+++ +   ++P  +   +  L     N VV   G+G+T    S        
Sbjct: 124 DIALLRISSDLSKL--GIKPVCLVHDDSKLLKQYKNGVV--IGYGLTLGEDSSGEPKLIN 179

Query: 282 SEQLRHVQVWVVNQSVCRSRYG-----GNTITNNMLCAGWLDVGGRDSCTGDSGGP-LYH 121
           S+ L+   V +++   C   +         IT   +CAG    G   +  GDSGGP L H
Sbjct: 180 SQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHG---TAPGDSGGPLLIH 236

Query: 120 XXXXXXXXXXXXNCG---------HARYPGVYARVSRYTSWIQ 19
                       + G           ++PGVY R+S+Y  WIQ
Sbjct: 237 KSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQ 279


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 627 TWSQNCGSSILNNRSVLTAAHC 562
           TWS++C  ++ + R +LTA HC
Sbjct: 70  TWSKHCSGTLTSPRHILTATHC 91


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
 Frame = -3

Query: 435 NDIAIMRTSSNINYVNNAVQPAR--IPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHV 262
           NDI I+   S I+ V  A       +P  N   G N  V + GWG     G  +     +
Sbjct: 176 NDIVILELESTIDDVEGANYACLPFLPEVNIQSGAN--VTSFGWGSDPGKGFDNAAFPMI 233

Query: 261 QVWVV---NQSVCRSRYGGNTITNNMLCAGWLDVGGRDSCTGDSGGPL 127
           QV  +     + C   +G  +I  +  C    +   ++ C+GDSGG L
Sbjct: 234 QVLTLATETLATCEENWG-TSIPFDSFCTA--EEEDKNVCSGDSGGGL 278


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,048,856
Number of Sequences: 27780
Number of extensions: 374733
Number of successful extensions: 1202
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)