Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k13f
(571 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 60 8e-10
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 58 6e-09
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 39 0.003
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 32 0.33
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 27 7.2
U53155-8|AAC48263.1| 284|Caenorhabditis elegans Hypothetical pr... 27 7.2
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 27 7.2
U28991-5|AAK68311.1| 234|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 27 9.5
U40028-9|AAA81120.1| 256|Caenorhabditis elegans Serpentine rece... 27 9.5
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 60.5 bits (140), Expect = 8e-10
Identities = 47/144 (32%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Frame = +1
Query: 88 RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGV-WRV 264
R++GGS ++ + +P LL CG S+++ VLTAAHC D + V
Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRLG----HHRCGGSLIDPNFVLTAAHCFAKDRRPTSYSV 112
Query: 265 RVGSTWGNSGGVVHHVNRHIIHPNYG-RWSRDNDIAIMRTSSNINYVNNAVQPARIPGSN 441
RVG SG H V IHP Y + D AIMR +N + +P +P +
Sbjct: 113 RVGGHRSGSGS-PHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVN-TSTTARPICLP--S 168
Query: 442 YNLGDNQVVWAAGWGVTRFGGSLS 513
+N++ GWG T G SLS
Sbjct: 169 LPAVENRLCVVTGWGSTIEGSSLS 192
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 57.6 bits (133), Expect = 6e-09
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Frame = +1
Query: 88 RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI-IDDAVGVWRV 264
R+VGG T +P AAL RN +T + +CG+SIL+ ++TAAHC D+ V + V
Sbjct: 26 RVVGGFETVPGAFPWTAAL---RNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 265 RVGSTWGNS----GGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIP 432
VG W N+ + ++ R +P Y + +DIAI+ N QP +P
Sbjct: 83 VVGD-WDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLP 140
Query: 433 GSNYNLGDNQVVWAAGWG 486
++ + +GWG
Sbjct: 141 SKDFVYTPGRQCVVSGWG 158
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 38.7 bits (86), Expect = 0.003
Identities = 30/105 (28%), Positives = 54/105 (51%)
Frame = +1
Query: 82 SLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVWR 261
S RI+GG++ I+ A L++ + CG++++++ ++TAAHC + +
Sbjct: 35 SFRIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSF- 91
Query: 262 VRVGSTWGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNIN 396
V V N+ V IH Y + DNDIA++R SS+++
Sbjct: 92 VYVREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS 135
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 31.9 bits (69), Expect = 0.33
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 166 TWSQNCGSSILNNRSVLTAAHC 231
TWS++C ++ + R +LTA HC
Sbjct: 70 TWSKHCSGTLTSPRHILTATHC 91
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -1
Query: 445 CSLIQECGPVAQHCSR--S*CCLKYA*SQYHCHETICRSLGVLCVCSRDAPRRHCC 284
CS+ C P C + + C Y + C + CR + +C +++ + CC
Sbjct: 539 CSMGHMCDPNTHVCCKGTNRCPKDYVETGEQCTDDNCRGINQICHRTKNGKAKICC 594
>U53155-8|AAC48263.1| 284|Caenorhabditis elegans Hypothetical
protein ZC513.1 protein.
Length = 284
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 108 NDDKSVPNNSCPAYDQE----LEYLVPELRKLYSQQPIRF 215
N+ KS + CP + + YL+PE+R LY + F
Sbjct: 88 NEMKSFVSTQCPTKKHQTYVCVGYLIPEIRHLYPDSTVSF 127
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 445 CSLIQECGPVAQHCSRS*CCLKY 377
C + +C P CS++ CCLKY
Sbjct: 412 CGVPCQCQPGYVQCSQNLCCLKY 434
>U28991-5|AAK68311.1| 234|Caenorhabditis elegans Hypothetical
protein F08F8.8 protein.
Length = 234
Score = 27.5 bits (58), Expect = 7.2
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +1
Query: 232 IIDDAVGVWRVRVGSTWGNSGGVVHHVNRH-IIHPNYG---RWSRDN-DIAIMR----TS 384
I DD V + ++W N+ + H + RH I +YG R +RDN D + R +S
Sbjct: 68 INDDMNDVAGAQSSASWANNPAIQHTLRRHREILRDYGSEYRRARDNVDQVLQRELLLSS 127
Query: 385 SNINYVNNAVQPARIPGSNYNLGDN 459
SN N NN + R G + L +N
Sbjct: 128 SNENR-NNPILNNRARGYDMYLKEN 151
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 27.1 bits (57), Expect = 9.5
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +1
Query: 25 SIFILALSLTAFTAISAAPSLRIVGGSTTTINRYPTIA-ALLMTRNWSTWSQNCGSSILN 201
+ FIL LS ++ S I+ G + N + T++ A ++TR + CG ++
Sbjct: 2 NFFILLLSFISY-------STSIINGFSA--NSFDTLSLASVITRFPDGTTNVCGGVLIA 52
Query: 202 NRSVLTAAHCII--DDAVGVWRVRVG 273
V+T+AHC+ DD +V +G
Sbjct: 53 PSIVITSAHCVFSGDDFAVTAKVTLG 78
>U40028-9|AAA81120.1| 256|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 39 protein.
Length = 256
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 421 PVAQHCSRS*CCLKYA*SQYHCHETICRSLGVLCVCSRDAP 299
PV Q+C C + + CH I +G++C R P
Sbjct: 200 PVGQYCIGGICVQNPMSTTFACHNLISCPMGMICQFGRCLP 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,595,281
Number of Sequences: 27780
Number of extensions: 293485
Number of successful extensions: 965
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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