Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k12f
         (557 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7NSX5 Cluster: Chromosome chr18 scaffold_1, whole geno...    37   0.37 
UniRef50_A1YKE3 Cluster: CCR4 associated factor-like protein; n=...    35   1.5  
UniRef50_Q8A1Z2 Cluster: Arabinan endo-1,5-alpha-L-arabinosidase...    34   2.6  
UniRef50_A4V7B4 Cluster: Putative uncharacterized protein; n=1; ...    33   3.4  
UniRef50_A1TXN2 Cluster: Plasmid recombination enzyme; n=1; Mari...    33   6.0  
UniRef50_O01717 Cluster: Alpha-2-macroglobulin; n=1; Limulus sp....    33   6.0  
UniRef50_Q4WTA1 Cluster: Putative uncharacterized protein; n=2; ...    33   6.0  
UniRef50_UPI000023E904 Cluster: hypothetical protein FG08821.1; ...    32   7.9  
UniRef50_Q84170 Cluster: Vaccinia virus gene F11L homolog; n=4; ...    32   7.9  
UniRef50_A2SGZ6 Cluster: Putative uncharacterized protein; n=1; ...    32   7.9  
UniRef50_Q7F0Z5 Cluster: Putative uncharacterized protein OJ1221...    32   7.9  
UniRef50_Q4CXU5 Cluster: Putative uncharacterized protein; n=2; ...    32   7.9  

>UniRef50_A7NSX5 Cluster: Chromosome chr18 scaffold_1, whole genome
            shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
            chr18 scaffold_1, whole genome shotgun sequence - Vitis
            vinifera (Grape)
          Length = 1193

 Score = 36.7 bits (81), Expect = 0.37
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
 Frame = +3

Query: 261  YPRRLVGLRCCPPSLVTQHAERGW*AWQHRR---PGXXXXXXXEVHAHREVMCTQALVCR 431
            +P+++V +    P  V  H + G   W++ R   PG          AHR V+ +  +   
Sbjct: 937  FPKKIVSVGDLKPEPVLWHEDNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNSLQVKAE 996

Query: 432  RGGLGASLLVEPALPLHSYRGPPV 503
            R G G  +   P  P   Y GPP+
Sbjct: 997  RNGFGDQMHAPPPYPAAPY-GPPL 1019


>UniRef50_A1YKE3 Cluster: CCR4 associated factor-like protein; n=1;
           Brachypodium sylvaticum|Rep: CCR4 associated factor-like
           protein - Brachypodium sylvaticum (False brome)
          Length = 291

 Score = 34.7 bits (76), Expect = 1.5
 Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = +2

Query: 305 GDPTR*TRLVSVAAPTSG--CCSITRSRGPRSQGGNVHSGTSVSEGWTRRVSPGRARPPT 478
           G PTR TR  S A PTS   CCS          G    SG+S S   TR  +    RPP+
Sbjct: 141 GPPTRATRS-SAATPTSSATCCSWAWHSWAPGAGPTPSSGSSTSAASTRPAATRTRRPPS 199

Query: 479 ALIQGPSCW 505
              + P+ W
Sbjct: 200 PCSR-PTGW 207


>UniRef50_Q8A1Z2 Cluster: Arabinan endo-1,5-alpha-L-arabinosidase A;
           n=10; Bacteroidetes|Rep: Arabinan
           endo-1,5-alpha-L-arabinosidase A - Bacteroides
           thetaiotaomicron
          Length = 637

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -1

Query: 407 HYLPVSVDLCCE*CCSTRTSVLPRSPAAFSVLGHQTGRATSESH 276
           +YL  S+  CCE   ST T+V+ RS   F     + GR+ S++H
Sbjct: 520 YYLFASIGRCCEGLKSTYTTVVGRSKNLFGPYVDKKGRSMSDNH 563


>UniRef50_A4V7B4 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas fluorescens SBW25|Rep: Putative
           uncharacterized protein - Pseudomonas fluorescens SBW25
          Length = 686

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = -3

Query: 339 TLTSRVQRVGSPDWEGNI*VPPVVLDTELTVAPASSSKSLAGVLPNDAEVLSLDLC*AEV 160
           +++  VQ   +PD++G    P  V+D +L  AP  + K   G   N  +V  + +C  ++
Sbjct: 365 SVSKSVQSGTNPDYKGQSLAPDCVIDGKLDQAPGKAGKGFGGGAGNKEKVDGMTVCPEDI 424

Query: 159 CLRED 145
               D
Sbjct: 425 SEARD 429


>UniRef50_A1TXN2 Cluster: Plasmid recombination enzyme; n=1;
           Marinobacter aquaeolei VT8|Rep: Plasmid recombination
           enzyme - Marinobacter aquaeolei (strain ATCC 700491 /
           DSM 11845 / VT8)(Marinobacter hydrocarbonoclasticus
           (strain DSM 11845))
          Length = 384

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +3

Query: 168 LSRGPATRPPRHSEVRLQDS-LMTTLARQSAPYPRRLVGLRCCPPSLVTQHAERGW 332
           L RG      RHSE+R   S L T + R+    P   V    CPP  +TQ A R W
Sbjct: 181 LQRGLKKSRARHSELRTWYSRLPTEIKREEIRLPSFRVR---CPPPAITQTARRAW 233


>UniRef50_O01717 Cluster: Alpha-2-macroglobulin; n=1; Limulus
           sp.|Rep: Alpha-2-macroglobulin - Limulus sp
          Length = 1507

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 306 PDWEGNI*VPPVVLDTELTVAPASSSKSLAGVL 208
           P+WE N+ VPP + +T LT+ P+      A +L
Sbjct: 551 PEWENNVIVPPHIGETSLTLIPSFEMNPSAKIL 583


>UniRef50_Q4WTA1 Cluster: Putative uncharacterized protein; n=2;
           Trichocomaceae|Rep: Putative uncharacterized protein -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 483

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = +3

Query: 6   WLAAARHARSSSKFINFINARIY*RTTETHFSGGLEQMI--RSTCSTFGLR-EDRLQLSR 176
           W  AARHAR++ +   +   R+Y RT +     GLE  +        FGL     LQ+SR
Sbjct: 230 WDPAARHARNNKRTDEYRGTRMYQRTVKIWTQDGLESEVSRHPHRQFFGLEFSYSLQISR 289

Query: 177 G 179
           G
Sbjct: 290 G 290


>UniRef50_UPI000023E904 Cluster: hypothetical protein FG08821.1; n=1;
            Gibberella zeae PH-1|Rep: hypothetical protein FG08821.1
            - Gibberella zeae PH-1
          Length = 1416

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +2

Query: 323  TRLVSVAAPTSGCCSITRSRGPRSQGGNVHSGTSVSEGWTRRVSPGR 463
            +R  SV + T+ C  +  SR   S+GG+V+   ++  G   +++PGR
Sbjct: 1150 SRAYSVVSGTTNCFELGVSRDDNSRGGSVYLHDNLQVGDVIKIAPGR 1196


>UniRef50_Q84170 Cluster: Vaccinia virus gene F11L homolog; n=4;
           Parapoxvirus|Rep: Vaccinia virus gene F11L homolog - Orf
           virus
          Length = 442

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = +2

Query: 347 PTSGCCSITRSRGPRSQGGNVHS--GTSVSEGWTRRVSPGRARPPTALIQGPSCWVVITQ 520
           PT+GC  + R R     GG+     G   ++     V+P  ARP    + G +C V++  
Sbjct: 20  PTAGCMPLRRPRDGADGGGDSDDDYGYGDTDSVASSVAPVEARPLVLTVPGTNCPVLVDS 79

Query: 521 IL-LRLHN 541
           +   R+ N
Sbjct: 80  VFETRIEN 87


>UniRef50_A2SGZ6 Cluster: Putative uncharacterized protein; n=1;
           Methylibium petroleiphilum PM1|Rep: Putative
           uncharacterized protein - Methylibium petroleiphilum
           (strain PM1)
          Length = 1699

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
 Frame = -3

Query: 405 LPPCERGPLLRVMLQHPDVGAATLTSRVQR----VGSPDWEGNI*VPPVVLDTELTVAPA 238
           LPP  RG L       P VG A LT+   +    V +PD+ G + +P  V D+E  V+  
Sbjct: 428 LPPAARGTLYLADGVTPVVGGAPLTAEQAQSLVFVPAPDFTGTVNIPFTVTDSEGAVSAT 487

Query: 237 SSS 229
           +++
Sbjct: 488 TTA 490


>UniRef50_Q7F0Z5 Cluster: Putative uncharacterized protein
           OJ1221_H04.113; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OJ1221_H04.113 - Oryza sativa subsp. japonica (Rice)
          Length = 177

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -3

Query: 438 HPSDTLVPECTLPPCERGPLLRVMLQHPDVGAATLTSRVQRVGSPDWEG 292
           HP  T+ P   LPP   G        HP   AA L S + R    +W+G
Sbjct: 125 HPGATMQPPPLLPPSMHG---EPATTHPLASAAALPSAIHRCAPENWKG 170


>UniRef50_Q4CXU5 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 451

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = -3

Query: 531 RNKICVMTTQQEGPCMSAVGGRARPGETRR---VHPSDTLVPECTLPPCERG 385
           R K+CV   Q  G C+  + GR    E  R   + P+   V  C +P CE G
Sbjct: 9   RGKMCVEVKQGGGTCVLELDGRTLTFEKFRECCLEPNVPAVIRCAVPECETG 60


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,458,382
Number of Sequences: 1657284
Number of extensions: 12728016
Number of successful extensions: 37312
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 35599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37297
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)