BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12k12f (557 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.44 AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.44 AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.44 AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.44 AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.44 AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.44 AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 25 0.44 AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.44 DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein. 24 0.77 AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 1.0 AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 1.3 AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 1.3 AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 1.3 AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 1.3 AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 23 1.8 AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.4 DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 22 4.1 AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 22 4.1 EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 21 5.4 EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 21 5.4 U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 7.2 U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 7.2 AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 21 7.2 AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 7.2 AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 21 7.2 U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 9.5 DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 9.5 >AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 25.0 bits (52), Expect = 0.44 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +3 Query: 459 VEPALPLHSYRGPPVG*SLRKFYCDYTML 545 V P P H Y P G L+ DYT L Sbjct: 48 VAPQYPQHPYAAPAPGHGLQPTMGDYTQL 76 >AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 25.0 bits (52), Expect = 0.44 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +3 Query: 459 VEPALPLHSYRGPPVG*SLRKFYCDYTML 545 V P P H Y P G L+ DYT L Sbjct: 48 VAPQYPQHPYAAPAPGHGLQPTMGDYTQL 76 >AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax protein. Length = 230 Score = 25.0 bits (52), Expect = 0.44 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +3 Query: 459 VEPALPLHSYRGPPVG*SLRKFYCDYTML 545 V P P H Y P G L+ DYT L Sbjct: 48 VAPQYPQHPYAAPAPGHGLQPTMGDYTQL 76 >AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 25.0 bits (52), Expect = 0.44 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +3 Query: 459 VEPALPLHSYRGPPVG*SLRKFYCDYTML 545 V P P H Y P G L+ DYT L Sbjct: 48 VAPQYPQHPYAAPAPGHGLQPTMGDYTQL 76 >AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax protein. Length = 297 Score = 25.0 bits (52), Expect = 0.44 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +3 Query: 459 VEPALPLHSYRGPPVG*SLRKFYCDYTML 545 V P P H Y P G L+ DYT L Sbjct: 48 VAPQYPQHPYAAPAPGHGLQPTMGDYTQL 76 >AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. Length = 312 Score = 25.0 bits (52), Expect = 0.44 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +3 Query: 459 VEPALPLHSYRGPPVG*SLRKFYCDYTML 545 V P P H Y P G L+ DYT L Sbjct: 48 VAPQYPQHPYAAPAPGHGLQPTMGDYTQL 76 >AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax protein. Length = 157 Score = 25.0 bits (52), Expect = 0.44 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +3 Query: 459 VEPALPLHSYRGPPVG*SLRKFYCDYTML 545 V P P H Y P G L+ DYT L Sbjct: 48 VAPQYPQHPYAAPAPGHGLQPTMGDYTQL 76 >AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced Scr protein. Length = 312 Score = 25.0 bits (52), Expect = 0.44 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +3 Query: 459 VEPALPLHSYRGPPVG*SLRKFYCDYTML 545 V P P H Y P G L+ DYT L Sbjct: 48 VAPQYPQHPYAAPAPGHGLQPTMGDYTQL 76 >DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein. Length = 162 Score = 24.2 bits (50), Expect = 0.77 Identities = 12/52 (23%), Positives = 23/52 (44%) Frame = -3 Query: 549 RITLCNRNKICVMTTQQEGPCMSAVGGRARPGETRRVHPSDTLVPECTLPPC 394 +I R+ +C + + +S +A+PGE + + + EC PC Sbjct: 79 KIWQMERSCMCCQESGEREASVSLFCPKAKPGERKFIKVTTKAPLECMCRPC 130 >AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax protein. Length = 268 Score = 23.8 bits (49), Expect = 1.0 Identities = 11/27 (40%), Positives = 12/27 (44%) Frame = +3 Query: 465 PALPLHSYRGPPVG*SLRKFYCDYTML 545 P P H Y P G L+ DYT L Sbjct: 6 PQYPQHPYAAPAPGHGLQPTMGDYTQL 32 >AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase variant 2 protein. Length = 1558 Score = 23.4 bits (48), Expect = 1.3 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +1 Query: 157 TDFSSAEVQRQDLRVIRKYACKTL 228 TD SSA+ + + R YAC T+ Sbjct: 546 TDASSAKAVKNSDHITRIYACATM 569 >AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase variant 1 protein. Length = 1558 Score = 23.4 bits (48), Expect = 1.3 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +1 Query: 157 TDFSSAEVQRQDLRVIRKYACKTL 228 TD SSA+ + + R YAC T+ Sbjct: 546 TDASSAKAVKNSDHITRIYACATM 569 >AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B protein. Length = 1558 Score = 23.4 bits (48), Expect = 1.3 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +1 Query: 157 TDFSSAEVQRQDLRVIRKYACKTL 228 TD SSA+ + + R YAC T+ Sbjct: 546 TDASSAKAVKNSDHITRIYACATM 569 >AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A protein. Length = 1558 Score = 23.4 bits (48), Expect = 1.3 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +1 Query: 157 TDFSSAEVQRQDLRVIRKYACKTL 228 TD SSA+ + + R YAC T+ Sbjct: 546 TDASSAKAVKNSDHITRIYACATM 569 >AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor (isoform A) protein. Length = 549 Score = 23.0 bits (47), Expect = 1.8 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = -2 Query: 304 RLGGQHLSPTSRLGYGAD 251 ++G + LSP+S GY AD Sbjct: 152 KIGREDLSPSSLNGYSAD 169 >AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain transcription factor Prothoraxlessprotein. Length = 323 Score = 22.6 bits (46), Expect = 2.4 Identities = 9/24 (37%), Positives = 12/24 (50%) Frame = +3 Query: 435 GGLGASLLVEPALPLHSYRGPPVG 506 G S+ + +P H Y GPP G Sbjct: 48 GSCDPSVGLRQGIPPHHYGGPPSG 71 >DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 protein. Length = 496 Score = 21.8 bits (44), Expect = 4.1 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = +3 Query: 24 HARSSSKFINFINARIY 74 H S SK+++FIN Y Sbjct: 195 HVPSLSKYLDFINVMAY 211 >AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombinase protein. Length = 340 Score = 21.8 bits (44), Expect = 4.1 Identities = 8/22 (36%), Positives = 12/22 (54%) Frame = -3 Query: 165 EVCLREDRMCCRYSVSSVLTLL 100 E C R C ++V ++LT L Sbjct: 62 EFCQRNGHNCLDFTVQNILTFL 83 >EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering hormone receptorisoform B protein. Length = 451 Score = 21.4 bits (43), Expect = 5.4 Identities = 11/42 (26%), Positives = 20/42 (47%) Frame = -3 Query: 279 PPVVLDTELTVAPASSSKSLAGVLPNDAEVLSLDLC*AEVCL 154 P +D T + ++ ++S + V PN S+ C +CL Sbjct: 40 PSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCL 81 >EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering hormone receptorisoform A protein. Length = 434 Score = 21.4 bits (43), Expect = 5.4 Identities = 11/42 (26%), Positives = 20/42 (47%) Frame = -3 Query: 279 PPVVLDTELTVAPASSSKSLAGVLPNDAEVLSLDLC*AEVCL 154 P +D T + ++ ++S + V PN S+ C +CL Sbjct: 40 PSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCL 81 >U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. Length = 283 Score = 21.0 bits (42), Expect = 7.2 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +3 Query: 477 LHSYRGPPVG*SLR 518 LHS+ GPP+ +R Sbjct: 89 LHSHHGPPIHHQIR 102 >U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor Deformed protein. Length = 412 Score = 21.0 bits (42), Expect = 7.2 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +3 Query: 477 LHSYRGPPVG*SLR 518 LHS+ GPP+ +R Sbjct: 89 LHSHHGPPIHHQIR 102 >AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. Length = 556 Score = 21.0 bits (42), Expect = 7.2 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = -2 Query: 487 YECSGRAGSTRRDAPSPPLRHT 422 YEC GR+ + A S P T Sbjct: 80 YECEGRSAGSIPGASSTPENKT 101 >AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. Length = 412 Score = 21.0 bits (42), Expect = 7.2 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +3 Query: 477 LHSYRGPPVG*SLR 518 LHS+ GPP+ +R Sbjct: 89 LHSHHGPPIHHQIR 102 >AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcription factor TcDfd1 protein. Length = 126 Score = 21.0 bits (42), Expect = 7.2 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +3 Query: 477 LHSYRGPPVG*SLR 518 LHS+ GPP+ +R Sbjct: 89 LHSHHGPPIHHQIR 102 >U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. Length = 470 Score = 20.6 bits (41), Expect = 9.5 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = -3 Query: 384 PLLRVMLQHPDVGAATLTSRVQRVGS 307 P+L ++ + GAA +R QRV S Sbjct: 76 PVLSQIIANKQSGAAAPDARTQRVWS 101 >DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein. Length = 2700 Score = 20.6 bits (41), Expect = 9.5 Identities = 8/26 (30%), Positives = 14/26 (53%) Frame = -3 Query: 516 VMTTQQEGPCMSAVGGRARPGETRRV 439 +M G C ++G + RPG+ +V Sbjct: 592 MMFDPMSGKCEYSLGEKCRPGQIIQV 617 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 135,319 Number of Sequences: 336 Number of extensions: 2943 Number of successful extensions: 27 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 27 length of database: 122,585 effective HSP length: 54 effective length of database: 104,441 effective search space used: 13681771 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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