Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k12f
(557 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318... 32 1.2
AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318... 32 1.2
BC063293-1|AAH63293.1| 837|Homo sapiens ADAM metallopeptidase w... 31 2.1
AY044847-1|AAL02262.1| 837|Homo sapiens aggrecanase 1 protein. 30 6.3
AL590714-6|CAH72146.1| 837|Homo sapiens ADAM metallopeptidase w... 30 6.3
AL589787-3|CAI40680.1| 662|Homo sapiens novel protein protein. 29 8.4
AL589787-2|CAI40679.1| 383|Homo sapiens novel protein protein. 29 8.4
AL589787-1|CAI40678.1| 652|Homo sapiens novel protein protein. 29 8.4
AL583860-3|CAI12409.1| 662|Homo sapiens novel protein protein. 29 8.4
AL583860-2|CAI12408.1| 383|Homo sapiens novel protein protein. 29 8.4
AL583860-1|CAI12407.1| 652|Homo sapiens novel protein protein. 29 8.4
AK057500-1|BAB71512.1| 662|Homo sapiens protein ( Homo sapiens ... 29 8.4
AK057372-1|BAB71456.1| 391|Homo sapiens protein ( Homo sapiens ... 29 8.4
>AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 32.3 bits (70), Expect = 1.2
Identities = 26/66 (39%), Positives = 29/66 (43%)
Frame = +2
Query: 302 SGDPTR*TRLVSVAAPTSGCCSITRSRGPRSQGGNVHSGTSVSEGWTRRVSPGRARPPTA 481
SG + R S P SG S T +R PRS G+ S S RRVSP PP A
Sbjct: 29 SGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPS---PPRA 85
Query: 482 LIQGPS 499
PS
Sbjct: 86 RRGSPS 91
>AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 32.3 bits (70), Expect = 1.2
Identities = 26/66 (39%), Positives = 29/66 (43%)
Frame = +2
Query: 302 SGDPTR*TRLVSVAAPTSGCCSITRSRGPRSQGGNVHSGTSVSEGWTRRVSPGRARPPTA 481
SG + R S P SG S T +R PRS G+ S S RRVSP PP A
Sbjct: 29 SGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPS---PPRA 85
Query: 482 LIQGPS 499
PS
Sbjct: 86 RRGSPS 91
>BC063293-1|AAH63293.1| 837|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 4 protein.
Length = 837
Score = 31.5 bits (68), Expect = 2.1
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Frame = +3
Query: 30 RSSSKFINFINARIY*RTTETHFSGGLEQMIRSTCSTFGLREDRLQLSRGPATRPPRHSE 209
R+ K+ AR TE +G C+ + R D + GP PR++
Sbjct: 553 RNGGKYCEGRRARFRSCNTEDCPTGSALTFREEQCAAYNHRTDLFKSFPGPMDWVPRYTG 612
Query: 210 VRLQDSLMTTLARQSAPY-----PRRLVGLRCCPPS 302
V QD T Q+ Y PR + G C P S
Sbjct: 613 VAPQDQCKLTCQAQALGYYYVLEPRVVDGTPCSPDS 648
>AY044847-1|AAL02262.1| 837|Homo sapiens aggrecanase 1 protein.
Length = 837
Score = 29.9 bits (64), Expect = 6.3
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 5/96 (5%)
Frame = +3
Query: 30 RSSSKFINFINARIY*RTTETHFSGGLEQMIRSTCSTFGLREDRLQLSRGPATRPPRHSE 209
R+ K+ R TE +G C+ + R D + GP PR++
Sbjct: 553 RNGGKYCEGRRTRFRSCNTEDCPTGSALTFREEQCAAYNHRTDLFKSFPGPMDWVPRYTG 612
Query: 210 VRLQDSLMTTLARQSAPY-----PRRLVGLRCCPPS 302
V QD T Q+ Y PR + G C P S
Sbjct: 613 VAPQDQCKLTCQAQALGYYYVLEPRVVDGTPCSPDS 648
>AL590714-6|CAH72146.1| 837|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 4 protein.
Length = 837
Score = 29.9 bits (64), Expect = 6.3
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 5/96 (5%)
Frame = +3
Query: 30 RSSSKFINFINARIY*RTTETHFSGGLEQMIRSTCSTFGLREDRLQLSRGPATRPPRHSE 209
R+ K+ R TE +G C+ + R D + GP PR++
Sbjct: 553 RNGGKYCEGRRTRFRSCNTEDCPTGSALTFREEQCAAYNHRTDLFKSFPGPMDWVPRYTG 612
Query: 210 VRLQDSLMTTLARQSAPY-----PRRLVGLRCCPPS 302
V QD T Q+ Y PR + G C P S
Sbjct: 613 VAPQDQCKLTCQAQALGYYYVLEPRVVDGTPCSPDS 648
>AL589787-3|CAI40680.1| 662|Homo sapiens novel protein protein.
Length = 662
Score = 29.5 bits (63), Expect = 8.4
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 459 PGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHPDVGAATLTSRVQRVGSP 304
PG PSD PE LPP E P P G A++T +RVG P
Sbjct: 104 PGRLGIPAPSDERGPEAELPPKEERP-----CGGPRRGFASITITARRVGPP 150
>AL589787-2|CAI40679.1| 383|Homo sapiens novel protein protein.
Length = 383
Score = 29.5 bits (63), Expect = 8.4
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 459 PGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHPDVGAATLTSRVQRVGSP 304
PG PSD PE LPP E P P G A++T +RVG P
Sbjct: 57 PGRLGIPAPSDERGPEAELPPKEERP-----CGGPRRGFASITITARRVGPP 103
>AL589787-1|CAI40678.1| 652|Homo sapiens novel protein protein.
Length = 652
Score = 29.5 bits (63), Expect = 8.4
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 459 PGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHPDVGAATLTSRVQRVGSP 304
PG PSD PE LPP E P P G A++T +RVG P
Sbjct: 57 PGRLGIPAPSDERGPEAELPPKEERP-----CGGPRRGFASITITARRVGPP 103
>AL583860-3|CAI12409.1| 662|Homo sapiens novel protein protein.
Length = 662
Score = 29.5 bits (63), Expect = 8.4
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 459 PGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHPDVGAATLTSRVQRVGSP 304
PG PSD PE LPP E P P G A++T +RVG P
Sbjct: 104 PGRLGIPAPSDERGPEAELPPKEERP-----CGGPRRGFASITITARRVGPP 150
>AL583860-2|CAI12408.1| 383|Homo sapiens novel protein protein.
Length = 383
Score = 29.5 bits (63), Expect = 8.4
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 459 PGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHPDVGAATLTSRVQRVGSP 304
PG PSD PE LPP E P P G A++T +RVG P
Sbjct: 57 PGRLGIPAPSDERGPEAELPPKEERP-----CGGPRRGFASITITARRVGPP 103
>AL583860-1|CAI12407.1| 652|Homo sapiens novel protein protein.
Length = 652
Score = 29.5 bits (63), Expect = 8.4
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 459 PGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHPDVGAATLTSRVQRVGSP 304
PG PSD PE LPP E P P G A++T +RVG P
Sbjct: 57 PGRLGIPAPSDERGPEAELPPKEERP-----CGGPRRGFASITITARRVGPP 103
>AK057500-1|BAB71512.1| 662|Homo sapiens protein ( Homo sapiens
cDNA FLJ32938 fis, clone TESTI2007613. ).
Length = 662
Score = 29.5 bits (63), Expect = 8.4
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 459 PGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHPDVGAATLTSRVQRVGSP 304
PG PSD PE LPP E P P G A++T +RVG P
Sbjct: 104 PGRLGIPAPSDERGPEAELPPKEERP-----CGGPRRGFASITITARRVGPP 150
>AK057372-1|BAB71456.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ32810 fis, clone TESTI2002729, weakly similar to
Homo sapiens mRNA for oligophrenin 1. ).
Length = 391
Score = 29.5 bits (63), Expect = 8.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 344 APTSGCCSITRSRGPRSQGGNVHSGTSVSEGWTRRVSPGRARPP 475
A S SI+ + G +S G++ S TSV T + SP PP
Sbjct: 305 ASASSLRSISAAEGNKSYSGSIQSLTSVGSKETPKASPNPDLPP 348
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,041,866
Number of Sequences: 237096
Number of extensions: 2038706
Number of successful extensions: 6039
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6039
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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