SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k10r
         (724 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)                     61   1e-09
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)                     51   8e-07
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)                     48   6e-06
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)              48   8e-06
SB_35182| Best HMM Match : CUB (HMM E-Value=0)                         46   2e-05
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)               46   4e-05
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)                     43   3e-04
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   4e-04
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)             40   0.002
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)                     40   0.003
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)               39   0.005
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.011
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)                     36   0.025
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.025
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)                     35   0.058
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)                  35   0.058
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)           35   0.077
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)                      35   0.077
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.13 
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)                     33   0.18 
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)                33   0.31 
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)                33   0.31 
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)                     32   0.54 
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.95 
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)                      31   1.2  
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)                 30   2.2  
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.0  
SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)                     28   8.8  
SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.8  
SB_35220| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.8  
SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.8  

>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 696

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 4/162 (2%)
 Frame = -1

Query: 481 VHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTT 302
           V   + HPE+ +     D++++ ++  + F                       + GWG+T
Sbjct: 154 VSHVIEHPEYDDRKIKNDIALLELSRPVKFDREGKVGTACLTNQQPTPGKRCYITGWGST 213

Query: 301 VQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAP 122
           +  G+ S   L +  L + +  +C+ +Y G   V      CAG  R+G     N D G P
Sbjct: 214 IGTGN-SPRILQQAMLPIASHNDCKNKYYG---VSSTAHLCAGEARSGASGGCNGDSGGP 269

Query: 121 AFFQNAXV----GIVSFGKSXANDIYPVVLTSISSFTEWILQ 8
              ++       G VS+GK      Y  V   ++S+T+WI Q
Sbjct: 270 LVCEDNGRWYLHGAVSYGKLHCPTTYYTVFARVASYTDWIKQ 311


>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 657

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 13/209 (6%)
 Frame = -1

Query: 655 EVFLPILNQWFQQCAGIVLTNYHYLSTATCF--HGEFYDPAYRRIIAGSSRRSE------ 500
           E+ L   N     C G ++  Y  L+++ CF  +         R+     RR E      
Sbjct: 2   EIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEII 61

Query: 499 PGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDL 320
            G+  Y+H  +   +      D DV+++++     F                       +
Sbjct: 62  QGDQLYIHPGLVVGDLISPG-DYDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFV 120

Query: 319 LGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDN 140
            GWG T +G   S   L++LE+ + +KE C      ++  + D  FCAG  + GGRD   
Sbjct: 121 TGWGKTAEGSPYSP-VLNELEVDIVSKEVCNAN-DSYNGTINDRYFCAGFPQ-GGRDSCG 177

Query: 139 TDLGAPAFFQNA-----XVGIVSFGKSXA 68
            D G P    NA       G+VS+G+  A
Sbjct: 178 GDSGGPLVCSNADGQYVLRGVVSWGEGCA 206


>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 366

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 15/169 (8%)
 Frame = -1

Query: 463 HPEFSEENYDKDVSIVRVTHAIHFGPNXX---XXXXXXXXXXXXXXXXVDLLGWGTTVQG 293
           HP +S ++YD D++++R+   + F                          + GWG     
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISGWGKRKLW 258

Query: 292 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFF 113
                  LH+  + + + + CR+ +   D +V  N FCAG   +   D    D G P   
Sbjct: 259 RDRVANRLHEATVPIVDIQTCRKAHP--DYIVTANMFCAGFENSSRGDACQGDSGGPFSV 316

Query: 112 QN------------AXVGIVSFGKSXANDIYPVVLTSISSFTEWILQNV 2
            N              +G++S+G          V T + +F +WIL  +
Sbjct: 317 DNPLPATPKGQHRHVLLGVISWGDGCGKFGKYGVYTRLFNFIDWILNEI 365


>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 669

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 41/216 (18%), Positives = 80/216 (37%), Gaps = 12/216 (5%)
 Frame = -1

Query: 625  FQQCAGIVLTNYHYLSTATCFH-----GEFYDPAYRRIIAGSSRRSEPGEISY---VHFA 470
            F  C G ++++   ++ A   H     G   +P    ++ G+ ++     +     +   
Sbjct: 452  FHTCGGSLISDRWVVTAAQGIHRNKNPGGRQNPGGYTVVVGAHKKRGSTSVQQSLRLSQI 511

Query: 469  VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGG 290
            + HP++++     D++++ +   + F                       + GWG      
Sbjct: 512  IEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWGAINGDT 571

Query: 289  SVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQ 110
              S   L +  L + + ENCR +Y     V      CAG  R+      N D G P   +
Sbjct: 572  QQSPDILQQAMLPIASHENCRRKY---GDVSSTAHLCAGEARSDAAGGCNGDSGGPLVCE 628

Query: 109  NAXV----GIVSFGKSXANDIYPVVLTSISSFTEWI 14
            +       G VS+G       +  V   ++S+T+WI
Sbjct: 629  DNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWI 664



 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
 Frame = -1

Query: 625 FQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA--VNHPEF 452
           F  C G ++++   ++ A C H       Y  ++    +R        +  +  + HP++
Sbjct: 129 FHTCGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKY 188

Query: 451 SEENYDKDVSIVRVTHAIHF 392
           ++     D++++ +   + F
Sbjct: 189 NDRRIVNDIALLELATPVQF 208


>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
          Length = 963

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
 Frame = -1

Query: 316 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNT 137
           GWG   +G   +   L + ++ + +++ C  Q    DR + +N  CAG+ R GG D    
Sbjct: 351 GWGALQEGAGSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGM-RQGGVDSCQG 408

Query: 136 DLGAPAFFQN-------AXVGIVSFGKSXANDIYPVVLTSISSFTEWI 14
           D G P    N         VG+ S+GK  A  +   +  ++  +  WI
Sbjct: 409 DSGGPFVCTNPENPRQWTLVGVTSWGKGCARALKYGIYANVRRYLHWI 456


>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 867

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 9/218 (4%)
 Frame = -1

Query: 640  ILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAV-- 467
            I N   Q C G ++T    ++ A C   +  +PA  ++  G+  R+ P     +  ++  
Sbjct: 649  IYNSGRQFCGGTLVTPEWVITAAHCVVDK--NPASIQVRLGAQDRTSPDPSVEMRISIRS 706

Query: 466  --NHPEF-SEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQ 296
              NHP++ S +    D++++R++                            + GWGT   
Sbjct: 707  IHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSS 766

Query: 295  GGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAF 116
            GGS  +  L++  + +  +  C   Y G    +  +  CAG    GG D    D G P  
Sbjct: 767  GGSQPEA-LNQAVVPLRTRSECERSYPGK---ISADMICAGNPE-GGVDTCQGDSGGPLV 821

Query: 115  FQNA----XVGIVSFGKSXANDIYPVVLTSISSFTEWI 14
             Q+       G+ S+G   A      V   +    +W+
Sbjct: 822  CQHGNQWFLTGVTSWGHGCAFAGKYGVYAGVQQLKQWV 859


>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 532

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 48/205 (23%), Positives = 77/205 (37%), Gaps = 4/205 (1%)
 Frame = -1

Query: 616 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENY 437
           C G ++T    L+ A C   +F  P+  RI   S+ + E      +     H +FS  + 
Sbjct: 106 CGGSLITPEWVLTAAHCVE-DFPHPSAHRIKERSAIQQE----FRLTKLFKHKDFSMSHL 160

Query: 436 DKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLHKLE 257
             DV+++++ + I                         + GWG  V GG  S+  L +  
Sbjct: 161 KNDVALLKLDNPIQPSDKVNTVCLPERNSRAQVGAQCFITGWGRLVGGGQPSE-ILQQAM 219

Query: 256 LIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQNAXV----GIV 89
           L V +   C  +      V   +  CAG +  GG   D+   G P            G V
Sbjct: 220 LPVASHSACDRKNSYLVPVEEKSMICAGGMGMGGCQGDS---GGPFVCNEGGRWVLRGAV 276

Query: 88  SFGKSXANDIYPVVLTSISSFTEWI 14
           S+G+      +  V   +SSF +WI
Sbjct: 277 SWGQPMCGTDHYTVFARVSSFIDWI 301


>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1033

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
 Frame = -1

Query: 283 SDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA 104
           + G L +  L +     CR+QY+  DR       CAG  R G     N D G P   + +
Sbjct: 632 TQGTLQQAMLPIAEHSLCRKQYRV-DRTAHP---CAGEARVGAAGGCNGDSGGPLVCEQS 687

Query: 103 XV----GIVSFGKSXANDIYPVVLTSISSFTEWI 14
            V    G VS+G       Y  V T +SS+  WI
Sbjct: 688 GVWVLHGAVSYGARWCPTDYYTVFTRVSSYVAWI 721



 Score = 35.9 bits (79), Expect = 0.033
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
 Frame = -1

Query: 256  LIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQNAXV----GIV 89
            L + + ENCR +Y     V      CAG  R+      N D G P   ++       G V
Sbjct: 913  LPIASHENCRRKYGD---VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAV 969

Query: 88   SFGKSXANDIYPVVLTSISSFTEWI 14
            S+G       +  V   ++S+T+WI
Sbjct: 970  SYGMKYCPTTHYTVFARVASYTDWI 994


>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
          Length = 234

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 37/180 (20%), Positives = 63/180 (35%), Gaps = 4/180 (2%)
 Frame = -1

Query: 541 AYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXX 362
           A+RR+   SS  +E  ++  V     H  FS   Y  D++++++                
Sbjct: 2   AHRRL---SSNTAE--QVIKVKRIFKHSGFSMWRYRDDIALLQLERPAQLNDRVNVACLP 56

Query: 361 XXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKF 182
                        L GWG  V         L +  + + + E+C+ +Y     +      
Sbjct: 57  SPGDVPPVGSKCWLTGWGRQVDSSGPLPDILQQARIPIASHEDCKRKYGSG--IYSYTHL 114

Query: 181 CAGLVRAGGRDYDNTDLGAPAFFQN----AXVGIVSFGKSXANDIYPVVLTSISSFTEWI 14
           CAG  +         D G P   +        G+VSFG          V T +S++ +WI
Sbjct: 115 CAGEAKPNAAGACQGDSGGPLVCERNGQWTLYGVVSFGAGNCEVTSYTVYTKVSNYLDWI 174


>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 347

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 41/212 (19%), Positives = 75/212 (35%), Gaps = 7/212 (3%)
 Frame = -1

Query: 616 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG--EISYVHFAVNHPEFS-E 446
           C G V+     ++ A CF        Y   +      +  G  +   V   + HP+++  
Sbjct: 135 CGGSVVAPEWIVTAAHCFAYSKDAKDYTIAVGEHDLNATDGYEQRPDVERIILHPKYAPH 194

Query: 445 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLH 266
            N+D DV+++++   + +                       + GWG   + G      LH
Sbjct: 195 NNHDYDVALIKLASPLQYNDRVRPVCLPSLKEDLEENTQCYISGWGHLQEAGH-GPWVLH 253

Query: 265 KLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQNAXV---- 98
           +  + + +++ C++ Y      V     CAG   AGG D    D G P   +   V    
Sbjct: 254 QAAVPLVSRDTCQKAYNDLHYKVSSRMRCAG-YGAGGIDACQGDSGGPLVCKEGDVWYLM 312

Query: 97  GIVSFGKSXANDIYPVVLTSISSFTEWILQNV 2
           G +S+G   A      V   +     W+   +
Sbjct: 313 GAISWGVGCARGGRYGVYADMMDLKYWVQSTI 344


>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
          Length = 249

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 6/158 (3%)
 Frame = -1

Query: 469 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLL-GWGTTVQG 293
           V +P F+E +Y  D++++ +   +   P+                     + GWG   +G
Sbjct: 21  VYNPGFNERHYRNDIALLELERPVLTNPHVSPVCLPPVNAGKVPVGKNCFITGWGRVFEG 80

Query: 292 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVXD-NKFCAGLVRAGGRDYDNTDLGAPAF 116
              ++  L + EL+V +   C ++  G    V D +  CAG    GG   D+   G P  
Sbjct: 81  SDEAEF-LQEAELVVASNAKC-DKKNGELLPVDDASMVCAGGPGRGGCQGDS---GGPLV 135

Query: 115 FQNAXV----GIVSFGKSXANDIYPVVLTSISSFTEWI 14
              A      GIVS+G    +  +  V T + ++  WI
Sbjct: 136 CNEAGRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWI 173


>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 786

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 42/208 (20%), Positives = 77/208 (37%), Gaps = 7/208 (3%)
 Frame = -1

Query: 616  CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG---EISYVHFAVNHPEFSE 446
            C G V++ +  L+ A C   E    +  ++  G  R        ++  V   ++H  +S 
Sbjct: 574  CGGNVISPWWVLTAAHCVQDE--RASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYSY 631

Query: 445  ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLH 266
               D D +++++T  ++F                       + GWG+T   GS S   L 
Sbjct: 632  NTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRGSPSPNYLQ 689

Query: 265  KLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----XV 98
            ++ L + N   C   Y    R +     CAG      +   + D G P   +       +
Sbjct: 690  EVGLPLVNHSQCHATYLTASRKITPRMRCAG-TEGVAKAVCSGDSGGPLVCERGGRWFLM 748

Query: 97   GIVSFGKSXANDIYPVVLTSISSFTEWI 14
            G+ S+G        P V + + +  +WI
Sbjct: 749  GLSSWG-WVCPQARPKVFSDVLAAMDWI 775


>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 537

 Score = 36.3 bits (80), Expect = 0.025
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 4/156 (2%)
 Frame = -1

Query: 469 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGG 290
           ++H  +S    D D +++++T  ++F                       + GWG+T   G
Sbjct: 375 ISHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRG 432

Query: 289 SVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQ 110
           S S   L ++ L + N   C   Y    R +     CAG      +   + D G P   +
Sbjct: 433 SPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG-TEGVAKAVCSGDSGGPLVCE 491

Query: 109 NA----XVGIVSFGKSXANDIYPVVLTSISSFTEWI 14
                  +G+ S+G        P V + + +  +WI
Sbjct: 492 RGGRWFLMGLSSWG-WVCPQARPKVFSDVLAAMDWI 526


>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1465

 Score = 36.3 bits (80), Expect = 0.025
 Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
 Frame = -1

Query: 466  NHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVD--LLGWGTTVQG 293
            +HP FS   YD D++++R+    +                          +LGWG T   
Sbjct: 1249 SHPRFSWRTYDSDIALIRLRWKANITEYVRPVCLPNGYQRRLVKPRAKGVMLGWGVTEN- 1307

Query: 292  GSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFF 113
                   L +  + V N   C++ Y+     V  N  CAG  +   RD  N D G    F
Sbjct: 1308 -KRPSKTLKEAIVPVVNHNACKKAYENETWPVTSNMLCAG-YKNKSRDSCNRDSGGGFVF 1365

Query: 112  QNA 104
             ++
Sbjct: 1366 YDS 1368


>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 454

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
 Frame = -1

Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYD 143
           + GWG    GG+ S   L + +  + +   C +        V     CA   +  G D  
Sbjct: 344 ITGWGRLHSGGA-SPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCA---QVPGIDTC 399

Query: 142 NTDLGAPAFFQN----AXVGIVSFGKSXANDIYPVVLTSISSFTEWILQNV 2
             D G P   +N      VG+ S+G   A+  YP +   ++   +W+  ++
Sbjct: 400 QGDSGGPLVCENNNKWTLVGVTSWGYGCAHPDYPGIYAKLTELKDWVFHHM 450


>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
          Length = 687

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
 Frame = -1

Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXD-NKFCAGLVRAGGRDY 146
           + GWG   +G   ++  L + EL+V +   C ++  G    V D +  CAG    GG   
Sbjct: 531 IAGWGRVFEGSDEAEF-LQEAELVVASNAKC-DKKNGELLPVDDASMVCAGGPGRGGCQG 588

Query: 145 DNTDLGAPAFFQNAXV----GIVSFGKSXANDIYPVVLTSISSFTEWI 14
           D+   G P     A      GIVS+G    +  +  V T + ++  WI
Sbjct: 589 DS---GGPLVCNEAGRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWI 633


>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
          Length = 506

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 21/67 (31%), Positives = 30/67 (44%)
 Frame = -1

Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYD 143
           + GWGT   GG+     L +  + + ++  C   Y      + D+  CAGL  AGG D  
Sbjct: 78  ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 132

Query: 142 NTDLGAP 122
             D G P
Sbjct: 133 QGDSGGP 139


>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 530

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 21/67 (31%), Positives = 30/67 (44%)
 Frame = -1

Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYD 143
           + GWGT   GG+     L +  + + ++  C   Y      + D+  CAGL  AGG D  
Sbjct: 422 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 476

Query: 142 NTDLGAP 122
             D G P
Sbjct: 477 QGDSGGP 483


>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 898

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 2/161 (1%)
 Frame = -1

Query: 616 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSE-PGEISY-VHFAVNHPEFSEE 443
           C G ++     ++ A C         Y  ++    R    P + ++ +     H +FS  
Sbjct: 57  CGGSLIAKDWVVTAAHCVDRNPTPSGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMR 116

Query: 442 NYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLHK 263
           +   D++++++   +                         + GWG TV GGS + G L +
Sbjct: 117 HLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGSAA-GILQQ 175

Query: 262 LELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDN 140
             L V    +C+        V   +  CAG    GG   D+
Sbjct: 176 AMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQGKGGCQGDS 216


>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 968

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 14/76 (18%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = -1

Query: 616 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA---VNHPEFSE 446
           C G +++    ++ A C  G  + P+Y +++ G   R+ P      H     + HP ++ 
Sbjct: 93  CGGSLVSPTWVVTAAHCIAGSSHTPSY-KVVTGEHIRNSPEGTEQTHDVKRIITHPTYNS 151

Query: 445 ENYDKDVSIVRVTHAI 398
                D++++ ++  +
Sbjct: 152 PQLSNDIALIELSSPV 167


>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
          Length = 275

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 461 MVNSK-VNIRYFTGLTATGRSSDNATVCRIVEFSMETGSS*KVVVVGENNTSALLE 625
           M+NS+ +N   FTG   TGR    AT   +V+  +E GS   ++V+ + +    +E
Sbjct: 215 MINSRGINALTFTGSLETGRKVAAATAVNLVKCQLEMGSKNALIVLDDADLDNAVE 270


>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
          Length = 333

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = -1

Query: 655 EVFLPILNQW--FQQCAGIVLTNYHYLSTATCFH-GEFYDPAYRRIIAGSSRRSEPGEIS 485
           E F+  +  W    QC+G ++   H ++ A C H G+++      I+ G S  S   E+ 
Sbjct: 138 EPFVSSVKLWSDVMQCSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELD 197

Query: 484 YVHFAV 467
           Y  FAV
Sbjct: 198 Y--FAV 201


>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 282

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 14/117 (11%)
 Frame = -1

Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRV--------VXDNKFCAGLV 167
           + GWG +   G  ++  L + +L V +   C E++ G   +        V +   CAG  
Sbjct: 158 ITGWGRSYYPGPTAN-KLQQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDA 216

Query: 166 RAGGRDYDNTDLGAPAFFQNAX-----VGIVSFGKSXANDI-YPVVLTSISSFTEWI 14
              G++  N D G P   +N        G+VS+G    +   +  V   +S    WI
Sbjct: 217 GKTGKNGCNGDSGGPFVCRNTAGQWVLQGVVSWGDPECSSANHFSVFARVSVLRHWI 273


>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1864

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
 Frame = -1

Query: 655  EVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSS---RRSEPGEIS 485
            +V L +     Q+C G ++     L+ A CF   F  P    +  G S   RR   G+  
Sbjct: 1253 QVALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSL 1311

Query: 484  YVHFAVNHPEFSEENYDKDVSIVRVTHAIHF 392
             +     HP+++  +++ D++++++     F
Sbjct: 1312 SIKAIFVHPQYNSSSHEHDLAVLQLQQPAEF 1342


>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
          Length = 907

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +1

Query: 118 RQGHPSQYCRSRGHQPGPNRR--RICYXSRRD 207
           RQG P +YCRS   Q GP RR  R  Y  +R+
Sbjct: 338 RQGTPDEYCRSSVKQIGPFRRFERRGYSKKRN 369


>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
          Length = 231

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = -1

Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGG 155
           ++GWG TV GG  ++  L +  L V    +C ++     RV   +  CAG  RA G
Sbjct: 92  VVGWGRTVGGGQGAE-ILQQAMLPVAYDNHCMQRNNQLMRVDPVSMICAGGQRAAG 146


>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1870

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 38/178 (21%), Positives = 62/178 (34%), Gaps = 12/178 (6%)
 Frame = -1

Query: 511  RRSEPGEISY-VHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXX 335
            RR +  E  + V   + HP +  +  D DV+++R++H                       
Sbjct: 1394 RRGDGTEQDFTVRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVG 1453

Query: 334  XXVDLLGWGTT---VQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVR 164
                + GWG T     G SV    L +  + + +++ C    +    VV     C G   
Sbjct: 1454 KNCYITGWGRTGYNRPGASV----LQEAMMPIVSQQTCAAAMRRWG-VVTSRMICGGFGA 1508

Query: 163  AGGRDYDNTDLGAPAFFQNA-----XVGIVSFGK---SXANDIYPVVLTSISSFTEWI 14
                     D G P   Q +       G+VS+G    S   + Y  V   ++ F  WI
Sbjct: 1509 GSTISGCFGDSGGPFVCQGSNKRWNIQGVVSWGTRTCSSGQNEY-TVYARVAQFVPWI 1565


>SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)
          Length = 473

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -1

Query: 670 SLVQIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFY 548
           +LV +E + P  N+W ++    +LT   Y STA    G+ Y
Sbjct: 111 NLVSMERYDPSTNEWEEEAVAPMLTARKYFSTAV-LDGKLY 150


>SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1149

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +2

Query: 266 VEVAVRYTAALNGSSPSEQI-NKNTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILVVI 442
           +++ V Y AA+   S   Q  N+N L Y +   D    +   A +  M  SY+  +  + 
Sbjct: 303 MKIKVNYVAAVQDESTYSQFYNENNLKYEEEFTDVLENIKTRARIVIMVTSYNMAVEGMH 362

Query: 443 LLREFGMVNSK 475
           L +  G++N +
Sbjct: 363 LAKNRGLINGE 373


>SB_35220| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 166

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/77 (25%), Positives = 37/77 (48%)
 Frame = +2

Query: 209 MTLVLFPAVFFVGHNEFELVEVAVRYTAALNGSSPSEQINKNTLGYYDTLLDNSTLLDVW 388
           M +VLF A+F +   EF ++ +  + T + +GS  +  +N     Y D  +D  T+L   
Sbjct: 1   MAVVLF-ALFRL--LEFLMLVIFTKGTCSNSGSQQALHVNITCEKYLDVYVDGETMLTGV 57

Query: 389 AEVDGMCYSYDAHILVV 439
             V  +     +H++ V
Sbjct: 58  QGVHSILIDSSSHVMAV 74


>SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 398

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -2

Query: 600 SPTTTTFQLLPVSMENSTILHTVALSLDLPVAVSPVKYLMFTLLLTIPNSL 448
           SP+T+  Q++P +  +   L T + S +LPV       + FT    IP  +
Sbjct: 143 SPSTSVKQMVPNTQASRLCLQTTSASSNLPVTTQQSFRMTFTPPSMIPKPI 193


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,829,652
Number of Sequences: 59808
Number of extensions: 583685
Number of successful extensions: 1379
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -