Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k10r
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 61 1e-09
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 51 8e-07
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 48 6e-06
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 46 2e-05
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 43 3e-04
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 40 0.002
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.003
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 39 0.005
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.025
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.058
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 35 0.058
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 35 0.077
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.077
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.18
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 33 0.31
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 33 0.31
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.54
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.2
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 30 2.2
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 8.8
SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_35220| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 4/162 (2%)
Frame = -1
Query: 481 VHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTT 302
V + HPE+ + D++++ ++ + F + GWG+T
Sbjct: 154 VSHVIEHPEYDDRKIKNDIALLELSRPVKFDREGKVGTACLTNQQPTPGKRCYITGWGST 213
Query: 301 VQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAP 122
+ G+ S L + L + + +C+ +Y G V CAG R+G N D G P
Sbjct: 214 IGTGN-SPRILQQAMLPIASHNDCKNKYYG---VSSTAHLCAGEARSGASGGCNGDSGGP 269
Query: 121 AFFQNAXV----GIVSFGKSXANDIYPVVLTSISSFTEWILQ 8
++ G VS+GK Y V ++S+T+WI Q
Sbjct: 270 LVCEDNGRWYLHGAVSYGKLHCPTTYYTVFARVASYTDWIKQ 311
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 51.2 bits (117), Expect = 8e-07
Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 13/209 (6%)
Frame = -1
Query: 655 EVFLPILNQWFQQCAGIVLTNYHYLSTATCF--HGEFYDPAYRRIIAGSSRRSE------ 500
E+ L N C G ++ Y L+++ CF + R+ RR E
Sbjct: 2 EIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEII 61
Query: 499 PGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDL 320
G+ Y+H + + D DV+++++ F +
Sbjct: 62 QGDQLYIHPGLVVGDLISPG-DYDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFV 120
Query: 319 LGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDN 140
GWG T +G S L++LE+ + +KE C ++ + D FCAG + GGRD
Sbjct: 121 TGWGKTAEGSPYSP-VLNELEVDIVSKEVCNAN-DSYNGTINDRYFCAGFPQ-GGRDSCG 177
Query: 139 TDLGAPAFFQNA-----XVGIVSFGKSXA 68
D G P NA G+VS+G+ A
Sbjct: 178 GDSGGPLVCSNADGQYVLRGVVSWGEGCA 206
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 48.4 bits (110), Expect = 6e-06
Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 15/169 (8%)
Frame = -1
Query: 463 HPEFSEENYDKDVSIVRVTHAIHFGPNXX---XXXXXXXXXXXXXXXXVDLLGWGTTVQG 293
HP +S ++YD D++++R+ + F + GWG
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISGWGKRKLW 258
Query: 292 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFF 113
LH+ + + + + CR+ + D +V N FCAG + D D G P
Sbjct: 259 RDRVANRLHEATVPIVDIQTCRKAHP--DYIVTANMFCAGFENSSRGDACQGDSGGPFSV 316
Query: 112 QN------------AXVGIVSFGKSXANDIYPVVLTSISSFTEWILQNV 2
N +G++S+G V T + +F +WIL +
Sbjct: 317 DNPLPATPKGQHRHVLLGVISWGDGCGKFGKYGVYTRLFNFIDWILNEI 365
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 48.0 bits (109), Expect = 8e-06
Identities = 41/216 (18%), Positives = 80/216 (37%), Gaps = 12/216 (5%)
Frame = -1
Query: 625 FQQCAGIVLTNYHYLSTATCFH-----GEFYDPAYRRIIAGSSRRSEPGEISY---VHFA 470
F C G ++++ ++ A H G +P ++ G+ ++ + +
Sbjct: 452 FHTCGGSLISDRWVVTAAQGIHRNKNPGGRQNPGGYTVVVGAHKKRGSTSVQQSLRLSQI 511
Query: 469 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGG 290
+ HP++++ D++++ + + F + GWG
Sbjct: 512 IEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWGAINGDT 571
Query: 289 SVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQ 110
S L + L + + ENCR +Y V CAG R+ N D G P +
Sbjct: 572 QQSPDILQQAMLPIASHENCRRKY---GDVSSTAHLCAGEARSDAAGGCNGDSGGPLVCE 628
Query: 109 NAXV----GIVSFGKSXANDIYPVVLTSISSFTEWI 14
+ G VS+G + V ++S+T+WI
Sbjct: 629 DNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWI 664
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -1
Query: 625 FQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA--VNHPEF 452
F C G ++++ ++ A C H Y ++ +R + + + HP++
Sbjct: 129 FHTCGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKY 188
Query: 451 SEENYDKDVSIVRVTHAIHF 392
++ D++++ + + F
Sbjct: 189 NDRRIVNDIALLELATPVQF 208
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Frame = -1
Query: 316 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNT 137
GWG +G + L + ++ + +++ C Q DR + +N CAG+ R GG D
Sbjct: 351 GWGALQEGAGSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGM-RQGGVDSCQG 408
Query: 136 DLGAPAFFQN-------AXVGIVSFGKSXANDIYPVVLTSISSFTEWI 14
D G P N VG+ S+GK A + + ++ + WI
Sbjct: 409 DSGGPFVCTNPENPRQWTLVGVTSWGKGCARALKYGIYANVRRYLHWI 456
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 45.6 bits (103), Expect = 4e-05
Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 9/218 (4%)
Frame = -1
Query: 640 ILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAV-- 467
I N Q C G ++T ++ A C + +PA ++ G+ R+ P + ++
Sbjct: 649 IYNSGRQFCGGTLVTPEWVITAAHCVVDK--NPASIQVRLGAQDRTSPDPSVEMRISIRS 706
Query: 466 --NHPEF-SEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQ 296
NHP++ S + D++++R++ + GWGT
Sbjct: 707 IHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSS 766
Query: 295 GGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAF 116
GGS + L++ + + + C Y G + + CAG GG D D G P
Sbjct: 767 GGSQPEA-LNQAVVPLRTRSECERSYPGK---ISADMICAGNPE-GGVDTCQGDSGGPLV 821
Query: 115 FQNA----XVGIVSFGKSXANDIYPVVLTSISSFTEWI 14
Q+ G+ S+G A V + +W+
Sbjct: 822 CQHGNQWFLTGVTSWGHGCAFAGKYGVYAGVQQLKQWV 859
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 42.7 bits (96), Expect = 3e-04
Identities = 48/205 (23%), Positives = 77/205 (37%), Gaps = 4/205 (1%)
Frame = -1
Query: 616 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENY 437
C G ++T L+ A C +F P+ RI S+ + E + H +FS +
Sbjct: 106 CGGSLITPEWVLTAAHCVE-DFPHPSAHRIKERSAIQQE----FRLTKLFKHKDFSMSHL 160
Query: 436 DKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLHKLE 257
DV+++++ + I + GWG V GG S+ L +
Sbjct: 161 KNDVALLKLDNPIQPSDKVNTVCLPERNSRAQVGAQCFITGWGRLVGGGQPSE-ILQQAM 219
Query: 256 LIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQNAXV----GIV 89
L V + C + V + CAG + GG D+ G P G V
Sbjct: 220 LPVASHSACDRKNSYLVPVEEKSMICAGGMGMGGCQGDS---GGPFVCNEGGRWVLRGAV 276
Query: 88 SFGKSXANDIYPVVLTSISSFTEWI 14
S+G+ + V +SSF +WI
Sbjct: 277 SWGQPMCGTDHYTVFARVSSFIDWI 301
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = -1
Query: 283 SDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA 104
+ G L + L + CR+QY+ DR CAG R G N D G P + +
Sbjct: 632 TQGTLQQAMLPIAEHSLCRKQYRV-DRTAHP---CAGEARVGAAGGCNGDSGGPLVCEQS 687
Query: 103 XV----GIVSFGKSXANDIYPVVLTSISSFTEWI 14
V G VS+G Y V T +SS+ WI
Sbjct: 688 GVWVLHGAVSYGARWCPTDYYTVFTRVSSYVAWI 721
Score = 35.9 bits (79), Expect = 0.033
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = -1
Query: 256 LIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQNAXV----GIV 89
L + + ENCR +Y V CAG R+ N D G P ++ G V
Sbjct: 913 LPIASHENCRRKYGD---VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAV 969
Query: 88 SFGKSXANDIYPVVLTSISSFTEWI 14
S+G + V ++S+T+WI
Sbjct: 970 SYGMKYCPTTHYTVFARVASYTDWI 994
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/180 (20%), Positives = 63/180 (35%), Gaps = 4/180 (2%)
Frame = -1
Query: 541 AYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXX 362
A+RR+ SS +E ++ V H FS Y D++++++
Sbjct: 2 AHRRL---SSNTAE--QVIKVKRIFKHSGFSMWRYRDDIALLQLERPAQLNDRVNVACLP 56
Query: 361 XXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKF 182
L GWG V L + + + + E+C+ +Y +
Sbjct: 57 SPGDVPPVGSKCWLTGWGRQVDSSGPLPDILQQARIPIASHEDCKRKYGSG--IYSYTHL 114
Query: 181 CAGLVRAGGRDYDNTDLGAPAFFQN----AXVGIVSFGKSXANDIYPVVLTSISSFTEWI 14
CAG + D G P + G+VSFG V T +S++ +WI
Sbjct: 115 CAGEAKPNAAGACQGDSGGPLVCERNGQWTLYGVVSFGAGNCEVTSYTVYTKVSNYLDWI 174
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 39.5 bits (88), Expect = 0.003
Identities = 41/212 (19%), Positives = 75/212 (35%), Gaps = 7/212 (3%)
Frame = -1
Query: 616 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG--EISYVHFAVNHPEFS-E 446
C G V+ ++ A CF Y + + G + V + HP+++
Sbjct: 135 CGGSVVAPEWIVTAAHCFAYSKDAKDYTIAVGEHDLNATDGYEQRPDVERIILHPKYAPH 194
Query: 445 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLH 266
N+D DV+++++ + + + GWG + G LH
Sbjct: 195 NNHDYDVALIKLASPLQYNDRVRPVCLPSLKEDLEENTQCYISGWGHLQEAGH-GPWVLH 253
Query: 265 KLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQNAXV---- 98
+ + + +++ C++ Y V CAG AGG D D G P + V
Sbjct: 254 QAAVPLVSRDTCQKAYNDLHYKVSSRMRCAG-YGAGGIDACQGDSGGPLVCKEGDVWYLM 312
Query: 97 GIVSFGKSXANDIYPVVLTSISSFTEWILQNV 2
G +S+G A V + W+ +
Sbjct: 313 GAISWGVGCARGGRYGVYADMMDLKYWVQSTI 344
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 38.7 bits (86), Expect = 0.005
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 6/158 (3%)
Frame = -1
Query: 469 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLL-GWGTTVQG 293
V +P F+E +Y D++++ + + P+ + GWG +G
Sbjct: 21 VYNPGFNERHYRNDIALLELERPVLTNPHVSPVCLPPVNAGKVPVGKNCFITGWGRVFEG 80
Query: 292 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVXD-NKFCAGLVRAGGRDYDNTDLGAPAF 116
++ L + EL+V + C ++ G V D + CAG GG D+ G P
Sbjct: 81 SDEAEF-LQEAELVVASNAKC-DKKNGELLPVDDASMVCAGGPGRGGCQGDS---GGPLV 135
Query: 115 FQNAXV----GIVSFGKSXANDIYPVVLTSISSFTEWI 14
A GIVS+G + + V T + ++ WI
Sbjct: 136 CNEAGRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWI 173
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 37.5 bits (83), Expect = 0.011
Identities = 42/208 (20%), Positives = 77/208 (37%), Gaps = 7/208 (3%)
Frame = -1
Query: 616 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG---EISYVHFAVNHPEFSE 446
C G V++ + L+ A C E + ++ G R ++ V ++H +S
Sbjct: 574 CGGNVISPWWVLTAAHCVQDE--RASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYSY 631
Query: 445 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLH 266
D D +++++T ++F + GWG+T GS S L
Sbjct: 632 NTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRGSPSPNYLQ 689
Query: 265 KLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----XV 98
++ L + N C Y R + CAG + + D G P + +
Sbjct: 690 EVGLPLVNHSQCHATYLTASRKITPRMRCAG-TEGVAKAVCSGDSGGPLVCERGGRWFLM 748
Query: 97 GIVSFGKSXANDIYPVVLTSISSFTEWI 14
G+ S+G P V + + + +WI
Sbjct: 749 GLSSWG-WVCPQARPKVFSDVLAAMDWI 775
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 36.3 bits (80), Expect = 0.025
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 4/156 (2%)
Frame = -1
Query: 469 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGG 290
++H +S D D +++++T ++F + GWG+T G
Sbjct: 375 ISHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRG 432
Query: 289 SVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFFQ 110
S S L ++ L + N C Y R + CAG + + D G P +
Sbjct: 433 SPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG-TEGVAKAVCSGDSGGPLVCE 491
Query: 109 NA----XVGIVSFGKSXANDIYPVVLTSISSFTEWI 14
+G+ S+G P V + + + +WI
Sbjct: 492 RGGRWFLMGLSSWG-WVCPQARPKVFSDVLAAMDWI 526
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 36.3 bits (80), Expect = 0.025
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Frame = -1
Query: 466 NHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVD--LLGWGTTVQG 293
+HP FS YD D++++R+ + +LGWG T
Sbjct: 1249 SHPRFSWRTYDSDIALIRLRWKANITEYVRPVCLPNGYQRRLVKPRAKGVMLGWGVTEN- 1307
Query: 292 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDNTDLGAPAFF 113
L + + V N C++ Y+ V N CAG + RD N D G F
Sbjct: 1308 -KRPSKTLKEAIVPVVNHNACKKAYENETWPVTSNMLCAG-YKNKSRDSCNRDSGGGFVF 1365
Query: 112 QNA 104
++
Sbjct: 1366 YDS 1368
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 35.1 bits (77), Expect = 0.058
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Frame = -1
Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYD 143
+ GWG GG+ S L + + + + C + V CA + G D
Sbjct: 344 ITGWGRLHSGGA-SPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCA---QVPGIDTC 399
Query: 142 NTDLGAPAFFQN----AXVGIVSFGKSXANDIYPVVLTSISSFTEWILQNV 2
D G P +N VG+ S+G A+ YP + ++ +W+ ++
Sbjct: 400 QGDSGGPLVCENNNKWTLVGVTSWGYGCAHPDYPGIYAKLTELKDWVFHHM 450
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 35.1 bits (77), Expect = 0.058
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Frame = -1
Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXD-NKFCAGLVRAGGRDY 146
+ GWG +G ++ L + EL+V + C ++ G V D + CAG GG
Sbjct: 531 IAGWGRVFEGSDEAEF-LQEAELVVASNAKC-DKKNGELLPVDDASMVCAGGPGRGGCQG 588
Query: 145 DNTDLGAPAFFQNAXV----GIVSFGKSXANDIYPVVLTSISSFTEWI 14
D+ G P A GIVS+G + + V T + ++ WI
Sbjct: 589 DS---GGPLVCNEAGRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWI 633
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 34.7 bits (76), Expect = 0.077
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -1
Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYD 143
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 78 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 132
Query: 142 NTDLGAP 122
D G P
Sbjct: 133 QGDSGGP 139
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 34.7 bits (76), Expect = 0.077
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -1
Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYD 143
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 422 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 476
Query: 142 NTDLGAP 122
D G P
Sbjct: 477 QGDSGGP 483
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 33.9 bits (74), Expect = 0.13
Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 2/161 (1%)
Frame = -1
Query: 616 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSE-PGEISY-VHFAVNHPEFSEE 443
C G ++ ++ A C Y ++ R P + ++ + H +FS
Sbjct: 57 CGGSLIAKDWVVTAAHCVDRNPTPSGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMR 116
Query: 442 NYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLHK 263
+ D++++++ + + GWG TV GGS + G L +
Sbjct: 117 HLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGSAA-GILQQ 175
Query: 262 LELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGGRDYDN 140
L V +C+ V + CAG GG D+
Sbjct: 176 AMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQGKGGCQGDS 216
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/76 (18%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = -1
Query: 616 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA---VNHPEFSE 446
C G +++ ++ A C G + P+Y +++ G R+ P H + HP ++
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSY-KVVTGEHIRNSPEGTEQTHDVKRIITHPTYNS 151
Query: 445 ENYDKDVSIVRVTHAI 398
D++++ ++ +
Sbjct: 152 PQLSNDIALIELSSPV 167
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 461 MVNSK-VNIRYFTGLTATGRSSDNATVCRIVEFSMETGSS*KVVVVGENNTSALLE 625
M+NS+ +N FTG TGR AT +V+ +E GS ++V+ + + +E
Sbjct: 215 MINSRGINALTFTGSLETGRKVAAATAVNLVKCQLEMGSKNALIVLDDADLDNAVE 270
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 32.7 bits (71), Expect = 0.31
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -1
Query: 655 EVFLPILNQW--FQQCAGIVLTNYHYLSTATCFH-GEFYDPAYRRIIAGSSRRSEPGEIS 485
E F+ + W QC+G ++ H ++ A C H G+++ I+ G S S E+
Sbjct: 138 EPFVSSVKLWSDVMQCSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELD 197
Query: 484 YVHFAV 467
Y FAV
Sbjct: 198 Y--FAV 201
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 31.9 bits (69), Expect = 0.54
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 14/117 (11%)
Frame = -1
Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRV--------VXDNKFCAGLV 167
+ GWG + G ++ L + +L V + C E++ G + V + CAG
Sbjct: 158 ITGWGRSYYPGPTAN-KLQQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDA 216
Query: 166 RAGGRDYDNTDLGAPAFFQNAX-----VGIVSFGKSXANDI-YPVVLTSISSFTEWI 14
G++ N D G P +N G+VS+G + + V +S WI
Sbjct: 217 GKTGKNGCNGDSGGPFVCRNTAGQWVLQGVVSWGDPECSSANHFSVFARVSVLRHWI 273
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 31.1 bits (67), Expect = 0.95
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = -1
Query: 655 EVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSS---RRSEPGEIS 485
+V L + Q+C G ++ L+ A CF F P + G S RR G+
Sbjct: 1253 QVALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSL 1311
Query: 484 YVHFAVNHPEFSEENYDKDVSIVRVTHAIHF 392
+ HP+++ +++ D++++++ F
Sbjct: 1312 SIKAIFVHPQYNSSSHEHDLAVLQLQQPAEF 1342
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 118 RQGHPSQYCRSRGHQPGPNRR--RICYXSRRD 207
RQG P +YCRS Q GP RR R Y +R+
Sbjct: 338 RQGTPDEYCRSSVKQIGPFRRFERRGYSKKRN 369
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -1
Query: 322 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVRAGG 155
++GWG TV GG ++ L + L V +C ++ RV + CAG RA G
Sbjct: 92 VVGWGRTVGGGQGAE-ILQQAMLPVAYDNHCMQRNNQLMRVDPVSMICAGGQRAAG 146
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 28.7 bits (61), Expect = 5.0
Identities = 38/178 (21%), Positives = 62/178 (34%), Gaps = 12/178 (6%)
Frame = -1
Query: 511 RRSEPGEISY-VHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXX 335
RR + E + V + HP + + D DV+++R++H
Sbjct: 1394 RRGDGTEQDFTVRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVG 1453
Query: 334 XXVDLLGWGTT---VQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVXDNKFCAGLVR 164
+ GWG T G SV L + + + +++ C + VV C G
Sbjct: 1454 KNCYITGWGRTGYNRPGASV----LQEAMMPIVSQQTCAAAMRRWG-VVTSRMICGGFGA 1508
Query: 163 AGGRDYDNTDLGAPAFFQNA-----XVGIVSFGK---SXANDIYPVVLTSISSFTEWI 14
D G P Q + G+VS+G S + Y V ++ F WI
Sbjct: 1509 GSTISGCFGDSGGPFVCQGSNKRWNIQGVVSWGTRTCSSGQNEY-TVYARVAQFVPWI 1565
>SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 473
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 670 SLVQIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFY 548
+LV +E + P N+W ++ +LT Y STA G+ Y
Sbjct: 111 NLVSMERYDPSTNEWEEEAVAPMLTARKYFSTAV-LDGKLY 150
>SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 266 VEVAVRYTAALNGSSPSEQI-NKNTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILVVI 442
+++ V Y AA+ S Q N+N L Y + D + A + M SY+ + +
Sbjct: 303 MKIKVNYVAAVQDESTYSQFYNENNLKYEEEFTDVLENIKTRARIVIMVTSYNMAVEGMH 362
Query: 443 LLREFGMVNSK 475
L + G++N +
Sbjct: 363 LAKNRGLINGE 373
>SB_35220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +2
Query: 209 MTLVLFPAVFFVGHNEFELVEVAVRYTAALNGSSPSEQINKNTLGYYDTLLDNSTLLDVW 388
M +VLF A+F + EF ++ + + T + +GS + +N Y D +D T+L
Sbjct: 1 MAVVLF-ALFRL--LEFLMLVIFTKGTCSNSGSQQALHVNITCEKYLDVYVDGETMLTGV 57
Query: 389 AEVDGMCYSYDAHILVV 439
V + +H++ V
Sbjct: 58 QGVHSILIDSSSHVMAV 74
>SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -2
Query: 600 SPTTTTFQLLPVSMENSTILHTVALSLDLPVAVSPVKYLMFTLLLTIPNSL 448
SP+T+ Q++P + + L T + S +LPV + FT IP +
Sbjct: 143 SPSTSVKQMVPNTQASRLCLQTTSASSNLPVTTQQSFRMTFTPPSMIPKPI 193
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,829,652
Number of Sequences: 59808
Number of extensions: 583685
Number of successful extensions: 1379
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -