Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k10f
         (368 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80837-5|AAB37901.1|  455|Caenorhabditis elegans Hypothetical pr...    30   0.59 
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr...    28   1.8  
Z74028-6|CAI91174.1|  674|Caenorhabditis elegans Hypothetical pr...    27   3.2  
Z74028-5|CAA98427.1|  677|Caenorhabditis elegans Hypothetical pr...    27   3.2  
Z93397-3|CAB07720.2|  376|Caenorhabditis elegans Hypothetical pr...    27   4.2  
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa...    27   4.2  
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as...    27   4.2  
Z81530-2|CAB04306.1|  359|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    26   7.3  
AL161711-4|CAC44301.2|  301|Caenorhabditis elegans Hypothetical ...    26   7.3  
U97009-12|ABR92602.1|  532|Caenorhabditis elegans Udp-glucuronos...    26   9.7  
U97009-11|AAC69026.1|  533|Caenorhabditis elegans Udp-glucuronos...    26   9.7  

>U80837-5|AAB37901.1|  455|Caenorhabditis elegans Hypothetical
           protein F07E5.1 protein.
          Length = 455

 Score = 29.9 bits (64), Expect = 0.59
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 150 YSYPS*INGSNSALVLFSPTTTTFQLL 230
           YSYPS I   +S +V+ + TTTTF LL
Sbjct: 75  YSYPSPIVLEHSFVVMTTTTTTTFSLL 101


>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical protein
            T20F7.5 protein.
          Length = 1065

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = -2

Query: 241  METGSS*KVVVVGENNTSALLEPLIQDG*EYFNLDQAGMLANRHRSTEIASSAAADGSEH 62
            +E  SS  V    E+     +EP++++  +Y +LD   M + RHRS +I S    D   H
Sbjct: 907  LERKSSSTVPEKNEDELRVEIEPIMKELSDYESLD---MRSIRHRSDKIDSYFDLDSEFH 963

Query: 61   SY 56
             Y
Sbjct: 964  DY 965


>Z74028-6|CAI91174.1|  674|Caenorhabditis elegans Hypothetical
           protein C14C10.3b protein.
          Length = 674

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -2

Query: 154 EYFNLDQAGMLANRHRSTEIASSAAADGSEHSY 56
           E F+LD  G+L+ + +S E  SSA   G+EH++
Sbjct: 57  EVFSLDDFGLLSMKSQSLESISSA---GNEHNF 86


>Z74028-5|CAA98427.1|  677|Caenorhabditis elegans Hypothetical
           protein C14C10.3a protein.
          Length = 677

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -2

Query: 154 EYFNLDQAGMLANRHRSTEIASSAAADGSEHSY 56
           E F+LD  G+L+ + +S E  SSA   G+EH++
Sbjct: 57  EVFSLDDFGLLSMKSQSLESISSA---GNEHNF 86


>Z93397-3|CAB07720.2|  376|Caenorhabditis elegans Hypothetical
           protein ZC482.6 protein.
          Length = 376

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +2

Query: 170 QWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRXEPGEISYVHFAVNHPEF 349
           ++F+Q    VLT   + S A CF   F    YR  +    R   P  +  +  +V HP  
Sbjct: 307 RFFEQAQSFVLTFQIFNSVAHCFICFFLSSQYRETVKTMIRIKTPPTVMVLESSV-HPTT 365

Query: 350 SE 355
            E
Sbjct: 366 RE 367


>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
           protein kinase protein.
          Length = 1425

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 220 KVVVVGENNTSALLEPLIQDG*EYFNLDQAGML 122
           KV++VG + TS+L   + Q+G EY + D   ML
Sbjct: 875 KVIIVGTHATSSLFPQMNQEG-EYVSSDIEAML 906


>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
           (death-associated protein)kinase homolog protein 1
           protein.
          Length = 1425

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 220 KVVVVGENNTSALLEPLIQDG*EYFNLDQAGML 122
           KV++VG + TS+L   + Q+G EY + D   ML
Sbjct: 875 KVIIVGTHATSSLFPQMNQEG-EYVSSDIEAML 906


>Z81530-2|CAB04306.1|  359|Caenorhabditis elegans Hypothetical
           protein F36D1.2 protein.
          Length = 359

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = -2

Query: 280 SDNATVCRIVEFSMETGSS*KVVVV---GENNTSALLEPLIQDG*EYFNLDQAGMLANRH 110
           S N   C +  F+   G++   +++   G  + SA++  L+    EYFN  +   L N H
Sbjct: 156 SQNMFACTMSVFTTTMGATFHFIILTILGSLSGSAVIYALV----EYFNQRRLTKLENEH 211

Query: 109 RSTEIASS 86
           R+T    S
Sbjct: 212 RTTNYTLS 219


>Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical
           protein F58G11.2 protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 133 AGMLANRHRSTEIASSAAADGSEHSYG*GENGNH 32
           AG       ++   S    DG + SYG G  GNH
Sbjct: 33  AGQRRREDHNSSYQSYRRPDGRQDSYGGGHQGNH 66


>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 151  YFNLDQAGMLANRHRSTEIASSAAADGSEHSYG*GENG 38
            YF +D  G+  +  R+TEI S        H+   G NG
Sbjct: 6283 YFRIDSTGLCKHGFRTTEIPSRLHPVSRGHALVFGANG 6320


>AL161711-4|CAC44301.2|  301|Caenorhabditis elegans Hypothetical
           protein Y10G11A.1 protein.
          Length = 301

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 122 EHPSLVQIEVFLPILNQWFQQCAGIVL 202
           EH   + IE  +P +  W+QQ  G+++
Sbjct: 93  EHDHSLSIEEKVPFMEAWWQQSHGLII 119


>U97009-12|ABR92602.1|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform b protein.
          Length = 532

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +3

Query: 126 IPAWSKLKYSYPS*INGSNSALVLFSPTTTTF-QLLPVSMENSTILHTVALS 278
           +P W  L    P  I  SNS L    PTT T   +  ++++   + H  AL+
Sbjct: 238 VPHWRDLVKESPIYITNSNSYLDFAVPTTATIVHVGGITIDLEKMRHVAALT 289


>U97009-11|AAC69026.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform a protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +3

Query: 126 IPAWSKLKYSYPS*INGSNSALVLFSPTTTTF-QLLPVSMENSTILHTVALS 278
           +P W  L    P  I  SNS L    PTT T   +  ++++   + H  AL+
Sbjct: 239 VPHWRDLVKESPIYITNSNSYLDFAVPTTATIVHVGGITIDLEKMRHVAALT 290


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,436,407
Number of Sequences: 27780
Number of extensions: 169208
Number of successful extensions: 394
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)