Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k09r
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   3.3  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    24   4.4  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   7.6  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 462  TLLYDFFTVCGSKFLLHYKIQFIKLI 385
            T  YD  T  G  F LHYK+Q  K +
Sbjct: 958  TYEYDMPTKDGDVFKLHYKVQNNKYV 983


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 618 LKRMSGIFRLICAIWIMSTPKFINIPNPHGLQYG 517
           + ++S   R IC IW+++    I    P  LQ+G
Sbjct: 157 MSKLSRAVRFICVIWLIAIVSAI----PQALQFG 186


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 485 FKLMKDASHCHPYCNPWGLGMFINL 559
           +  + D  H  P C P  L MFIN+
Sbjct: 583 YSAVTDEDHLKPGCAPSVLIMFINM 607


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,851
Number of Sequences: 2352
Number of extensions: 18760
Number of successful extensions: 56
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)