Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k09r
         (749 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061354-1|AAL28902.1|  677|Drosophila melanogaster LD28135p pro...   122   5e-28
AE013599-678|AAF59064.1|  677|Drosophila melanogaster CG14749-PA...   122   5e-28

>AY061354-1|AAL28902.1|  677|Drosophila melanogaster LD28135p protein.
          Length = 677

 Score =  122 bits (294), Expect = 5e-28
 Identities = 63/165 (38%), Positives = 89/165 (53%)
 Frame = -3

Query: 735  PLFSSHVMPQKEGQTDKEFYLSRGYTYNDEGVVEKQDKFLKRMSGIFRLICAIWIMSTPK 556
            P    +V+PQ++GQT +++  + GY   D+  +EK D +LKR +G+ RL  A+ I    K
Sbjct: 513  PFLVPYVIPQQQGQTPEQYLKTIGYRLTDKNELEKPDIYLKRQTGLARLYAAVIISQGRK 572

Query: 555  FINIPNPHGLQYGWQWLASFINLKPEPDISATLLYDFFTVCGSKFLLHYKIQFIKLIKLI 376
                     L  GW WLA  +++KP PDISATL+ +     G +    Y  QF+KL+  I
Sbjct: 573  AAGPDECFELNEGWLWLAHMVHVKPLPDISATLIMEILQTLGFELWRTYGKQFVKLLVYI 632

Query: 375  STDYLEVLQNIDEGGPKTRLEVLLQNILKTGHIDPPSGLLQSDIW 241
               Y+  L   DEGGPKTRLE+LL   L+   I    G+L    W
Sbjct: 633  QNIYMPQLAAYDEGGPKTRLEMLLAKFLRERQIAQAVGVLPPGFW 677


>AE013599-678|AAF59064.1|  677|Drosophila melanogaster CG14749-PA
            protein.
          Length = 677

 Score =  122 bits (294), Expect = 5e-28
 Identities = 63/165 (38%), Positives = 89/165 (53%)
 Frame = -3

Query: 735  PLFSSHVMPQKEGQTDKEFYLSRGYTYNDEGVVEKQDKFLKRMSGIFRLICAIWIMSTPK 556
            P    +V+PQ++GQT +++  + GY   D+  +EK D +LKR +G+ RL  A+ I    K
Sbjct: 513  PFLVPYVIPQQQGQTPEQYLKTIGYRLTDKNELEKPDIYLKRQTGLARLYAAVIISQGRK 572

Query: 555  FINIPNPHGLQYGWQWLASFINLKPEPDISATLLYDFFTVCGSKFLLHYKIQFIKLIKLI 376
                     L  GW WLA  +++KP PDISATL+ +     G +    Y  QF+KL+  I
Sbjct: 573  AAGPDECFELNEGWLWLAHMVHVKPLPDISATLIMEILQTLGFELWRTYGKQFVKLLVYI 632

Query: 375  STDYLEVLQNIDEGGPKTRLEVLLQNILKTGHIDPPSGLLQSDIW 241
               Y+  L   DEGGPKTRLE+LL   L+   I    G+L    W
Sbjct: 633  QNIYMPQLAAYDEGGPKTRLEMLLAKFLRERQIAQAVGVLPPGFW 677


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,856,510
Number of Sequences: 53049
Number of extensions: 726488
Number of successful extensions: 1485
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)