Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k09f
         (554 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.58 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 277  TIGPNSPAKKELIYEEKQIPAKI 345
            TIG   P+KK  +     +PAKI
Sbjct: 1287 TIGEGQPSKKVTVSPSASVPAKI 1309


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 9   MVW*NGCTMQVQVY 50
           +VW   CT  VQVY
Sbjct: 164 LVWREVCTFVVQVY 177


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 540 ALTLFAILLKAFVHYFRPFTNHLFKR 463
           ++TLF     A  HY  P +  LF R
Sbjct: 192 SITLFGDGTSANFHYLSPQSRGLFHR 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,981
Number of Sequences: 336
Number of extensions: 2680
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)