BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12k09f (554 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 31 0.52 At2g26870.1 68415.m03224 phosphoesterase family protein low simi... 28 3.6 At5g47240.1 68418.m05825 MutT/nudix family protein similar to SP... 28 4.8 At3g46200.1 68416.m05001 MutT/nudix family protein similar to he... 28 4.8 At3g05740.1 68416.m00644 DNA helicase (RECQI1) identical to DNA ... 27 6.4 At1g16060.2 68414.m01927 ovule development protein, putative sim... 27 6.4 At1g16060.1 68414.m01926 ovule development protein, putative sim... 27 6.4 At3g13760.1 68416.m01736 DC1 domain-containing protein contains ... 27 8.4 >At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis thaliana]; similar to ESTs gb|R30087 and gb|AA394762 Length = 1538 Score = 31.1 bits (67), Expect = 0.52 Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 1/147 (0%) Frame = +1 Query: 106 KNSSYDSYNDRLGEILNRSITSKMRDSSIDETLAGFGKLRISALTKAVELSPLVKEATIG 285 K S D + EIL + + +DET A K R +A A E P++KE I Sbjct: 917 KRSRGDLEEAKTQEILKLKSSFEEMRKKVDETNALLLKEREAAKKAAEEAPPVIKETQIL 976 Query: 286 PNSPAKKELIYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEA-QLHQLSVEFFRK 462 K EL+ EE +E + L +K R D + E+ + + +E K Sbjct: 977 VEDTKKIELMTEE------LESVKVTLENEKQRADDAVRKFEEAQESLEDKKKKLEETEK 1030 Query: 463 SFEQMICKRAEIMNKCFQKYSEQRERR 543 +Q+ + KC SE + R Sbjct: 1031 KGQQLQESLTRMEEKCSNLESENKVLR 1057 >At2g26870.1 68415.m03224 phosphoesterase family protein low similarity to SP|Q9RGS8 Non-hemolytic phospholipase C precursor (EC 3.1.4.3) (Phosphatidylcholine cholinephosphohydrolase) {Burkholderia pseudomallei}; contains Pfam profile PF04185: Phosphoesterase family Length = 514 Score = 28.3 bits (60), Expect = 3.6 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = +1 Query: 193 DETLAGFGKLRISALTKAVELSPLVKEATI--GPNSPAKKELIYEEKQIPAKIEPL 354 D L F +L I T AV SP +++ T+ GPN YE IPA ++ L Sbjct: 332 DPFLFQFNRLGIRVPTIAV--SPWIEKGTVVHGPNGSPFPSSEYEHSSIPATVKKL 385 >At5g47240.1 68418.m05825 MutT/nudix family protein similar to SP|P53370 Nucleoside diphosphate-linked moiety X motif 6 {Homo sapiens}; contains Pfam profile PF00293: NUDIX domain Length = 369 Score = 27.9 bits (59), Expect = 4.8 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +1 Query: 295 PAKKELIYEEKQIPA-KIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 432 P ++I + +I A K PL E + + +RGD + +++ CEA+L Sbjct: 278 PLSDKIIIDALEIKAAKWMPLAEFVEQPMIRGDKMFKRVIEICEARL 324 >At3g46200.1 68416.m05001 MutT/nudix family protein similar to head organizer protein P17F11 GI:17976973 from [Xenopus laevis]; contains a NUDIX hydrolase domain IPR000086 Length = 311 Score = 27.9 bits (59), Expect = 4.8 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = +1 Query: 130 NDRLGEILNRSITSKMRDSSIDETLAGFGKLRISALTKAVELSPLVKEATIGP 288 N + GE+LN+ +T +M DS I E + G + S+L+ + + +E + P Sbjct: 185 NVQTGEVLNKKVTQEMFDSIICEVVEETG-IPASSLSSPLFIGISRRELNVRP 236 >At3g05740.1 68416.m00644 DNA helicase (RECQI1) identical to DNA Helicase [Arabidopsis thaliana] GI:10944747 Length = 606 Score = 27.5 bits (58), Expect = 6.4 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = +1 Query: 436 QLSVEFFRKSFEQMICKRAEIMNKC 510 Q+ +E+F +SF++MICK + +N C Sbjct: 578 QMLLEYFGESFDRMICKSS--LNPC 600 >At1g16060.2 68414.m01927 ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099)[Arabidopsis thaliana] Length = 275 Score = 27.5 bits (58), Expect = 6.4 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 Query: 238 TKAVELSPLVKEATIGPNSPAKKELIYEEKQIPAKIE 348 TK ++ SPLV E IGP++P E+ + P I+ Sbjct: 203 TKLLKSSPLVAEEVIGPSTP--PEIAPPRRSFPEDIQ 237 >At1g16060.1 68414.m01926 ovule development protein, putative similar to ovule development protein AINTEGUMENTA (GI:1209099)[Arabidopsis thaliana] Length = 345 Score = 27.5 bits (58), Expect = 6.4 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 Query: 238 TKAVELSPLVKEATIGPNSPAKKELIYEEKQIPAKIE 348 TK ++ SPLV E IGP++P E+ + P I+ Sbjct: 273 TKLLKSSPLVAEEVIGPSTP--PEIAPPRRSFPEDIQ 307 >At3g13760.1 68416.m01736 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 652 Score = 27.1 bits (57), Expect = 8.4 Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Frame = -3 Query: 405 EIITEIPS--ELIFNKVLWQRFNFGGDLFFF 319 E++ IPS ++IF+K W +F GD++F+ Sbjct: 153 ELVDIIPSKSDIIFDKCTWCGKDFKGDVWFY 183 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,983,157 Number of Sequences: 28952 Number of extensions: 206665 Number of successful extensions: 546 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 537 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 546 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1053014392 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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