Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k08f
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 33 0.14
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 33 0.18
Z68106-1|CAA92124.1| 516|Caenorhabditis elegans Hypothetical pr... 31 0.42
AF025471-1|AAB71058.1| 379|Caenorhabditis elegans Hypothetical ... 31 0.55
Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical pr... 31 0.73
X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein. 31 0.73
X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein. 31 0.73
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 29 2.9
U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical pr... 28 3.9
AF003137-5|AAB93643.1| 491|Caenorhabditis elegans Hypothetical ... 28 3.9
Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl pe... 28 5.1
AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl pe... 28 5.1
Z81546-6|CAB04457.1| 425|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 27 6.8
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 27 6.8
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 27 6.8
AF025470-4|AAB71054.1| 403|Caenorhabditis elegans Hypothetical ... 27 6.8
Z83239-2|CAB05802.1| 182|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 9.0
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 9.0
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 9.0
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 27 9.0
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 27 9.0
U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical pr... 27 9.0
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 27 9.0
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 206 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 316
NG NN Y N N Q N N N+ N+NYN N
Sbjct: 60 NGYNNNY----NNNNNQQQQFYNNNNNNYNNNNYNNN 92
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 381 SAPPCWPSPTATLLLWTGVVLPTVYTTLPS-MEFPVSDSSLATFWSG 518
+A P P PT LLW G + V++ L + ++FPV D F +G
Sbjct: 370 TAAPTVPPPTTKRLLWHGTRVTNVFSILMNGLQFPVGDRCGLMFGNG 416
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 381 SAPPCWPSPTATLLLWTGVVLPTVYTTLPS-MEFPVSDSSLATFWSG 518
+A P P PT LLW G + V++ L + ++FPV D F +G
Sbjct: 370 TAAPTVPPPTTKRLLWHGTRVTNVFSILMNGLQFPVGDRCGLMFGNG 416
>Z68106-1|CAA92124.1| 516|Caenorhabditis elegans Hypothetical
protein F41E7.1 protein.
Length = 516
Score = 31.5 bits (68), Expect = 0.42
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = -1
Query: 358 SVAVPAVDNNKERQVSIVVRVPDRVDIAIC--NNLMVVLV 245
+V VPA+ N KE+Q+ + R+P+ + +AIC +NL V++
Sbjct: 194 AVTVPAMINFKEKQLGSLKRIPENI-LAICCVDNLFCVIL 232
>AF025471-1|AAB71058.1| 379|Caenorhabditis elegans Hypothetical
protein R52.3 protein.
Length = 379
Score = 31.1 bits (67), Expect = 0.55
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 379 DPPRLAGRLRLQRY--CCGLAWSCQRSIQHCRQWSSQC 486
D +A ++R+ +Y C G+ CQ+ I R+WS +C
Sbjct: 114 DHYNIAWKIRILKYEECLGIYLDCQKEIYEGRKWSIKC 151
>Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical
protein C46F11.1b protein.
Length = 700
Score = 30.7 bits (66), Expect = 0.73
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 311 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 475
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 557 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 609
>Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical
protein C46F11.1a protein.
Length = 705
Score = 30.7 bits (66), Expect = 0.73
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 311 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 475
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 562 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 614
>X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein.
Length = 700
Score = 30.7 bits (66), Expect = 0.73
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 311 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 475
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 557 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 609
>X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein.
Length = 705
Score = 30.7 bits (66), Expect = 0.73
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 311 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 475
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 562 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 614
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +2
Query: 200 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSN----YNGNLPLFVIVHGWNSNGNS 364
SRN N W +N NN+ N +N N N YNGN WNS NS
Sbjct: 151 SRNDGENDDWNNGDQNNNNNFNSKNNRMNKYGNRNDGDDYNGN---GNNQDNWNSGSNS 206
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +2
Query: 200 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSN----YNGNLPLFVIVHGWNSNGNS 364
SRN N W +N NN+ N +N N N YNGN WNS NS
Sbjct: 151 SRNDGENDDWNNGDQNNNNNFNSKNNRMNKYGNRNDGDDYNGN---GNNQDNWNSGSNS 206
>Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical
protein C35A5.10 protein.
Length = 286
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 272 NGNVNSIRNSNYNGNL-PLFVIVHGWNSNGNSAVNTMI 382
N N N N+NYNGN P G+N+ G VN +
Sbjct: 121 NNNYNPYINNNYNGNYNPYGTSNGGYNAYGTIPVNVNV 158
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 259 SSYY-KWQCQLYPELELQWKPASLCYCPRLEQQ 354
S YY KWQ +PE E W+P C R+ Q+
Sbjct: 52 SEYYIKWQG--FPESECSWEPIENLQCDRMIQE 82
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 259 SSYY-KWQCQLYPELELQWKPASLCYCPRLEQQ 354
S YY KWQ +PE E W+P C R+ Q+
Sbjct: 52 SEYYIKWQG--FPESECSWEPIENLQCDRMIQE 82
>U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical
protein C15B12.4 protein.
Length = 545
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 350 SNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSV 487
S+GNS+VN M + + S V+ +D G Y A NG+ V
Sbjct: 289 SDGNSSVNLMSNTNIESDSGLGVVHIDGAGQGTDNYVVASNGLKFV 334
>AF003137-5|AAB93643.1| 491|Caenorhabditis elegans Hypothetical
protein C27A12.6 protein.
Length = 491
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +1
Query: 247 PKQPSSYYKWQCQLYPELELQWKPASLCYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYC- 423
P S Y K Y E+ L +CP ++ + ++ H +P RL +C
Sbjct: 188 PTMVSKYRKLMVASYVEIN-----CLLRWCPGIDCGKAVKVSHWEP-RLVVCSCGTCFCF 241
Query: 424 -CGLAWSCQRSIQHCRQWSSQCR 489
CG W + +H ++W +C+
Sbjct: 242 SCGQNWHEPLNCRHLKKWIKKCQ 264
>Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical
protein F57G8.5 protein.
Length = 498
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -1
Query: 358 SVAVPAVDNNKERQVSIVVRVPDRVDIAIC--NNLMVVLV 245
+V VPA+ + KER + R+P+ V +A+C +NL V+V
Sbjct: 185 AVTVPAMISFKERGLGSSKRIPENV-LAVCCVDNLFCVIV 223
>AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform b protein.
Length = 927
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 329 VIVHGWNSNGNSAVNTMIR-PALLAVSDCNVIVVDWRGLANGLYNTAVNGVP 481
V+VHGW+ G A+ + + P + + V DWR L + Y G P
Sbjct: 774 VVVHGWSYGGYMALQMIAKHPNIYRAAIAGGAVSDWR-LYDTAYTERYMGYP 824
>AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform a protein.
Length = 931
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 329 VIVHGWNSNGNSAVNTMIR-PALLAVSDCNVIVVDWRGLANGLYNTAVNGVP 481
V+VHGW+ G A+ + + P + + V DWR L + Y G P
Sbjct: 778 VVVHGWSYGGYMALQMIAKHPNIYRAAIAGGAVSDWR-LYDTAYTERYMGYP 828
>Z81546-6|CAB04457.1| 425|Caenorhabditis elegans Hypothetical
protein F53A2.9 protein.
Length = 425
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = +2
Query: 221 QYWLFTRRNQNNHQVITN---GNVNSIRNSNYNGNLPLF----VIVHGWNS 352
+YWL + + N G NSI+ SNY G +P +I+HG N+
Sbjct: 154 EYWLRNFQIDTLRIKVENLIPGKENSIQQSNYTGEIPPLKLKKLIIHGANN 204
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 27.5 bits (58), Expect = 6.8
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 49 SIVFWQCYPHDPWRQQSLCGRC 114
S W C+P+ W+++ LC C
Sbjct: 265 SKALWPCFPYSSWKEK-LCSEC 285
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 27.5 bits (58), Expect = 6.8
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 49 SIVFWQCYPHDPWRQQSLCGRC 114
S W C+P+ W+++ LC C
Sbjct: 227 SKALWPCFPYSSWKEK-LCSEC 247
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +2
Query: 242 RNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSD 409
+++ N + T+ N ++ N N N+P+ ++ G+ ++ + + L+ VSD
Sbjct: 44 QSEKNSNLYTSENTSNSNRLNLNQNIPVGTLIDGFELINEASGSGFLDDQLVDVSD 99
>AF025470-4|AAB71054.1| 403|Caenorhabditis elegans Hypothetical
protein W10D9.4 protein.
Length = 403
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 104 VEGVSRYVW-MPDGEGVPHLVDLEEP 178
V G +++V MPDG +PH + EEP
Sbjct: 303 VSGPNQFVMNMPDGRAIPHGMGQEEP 328
>Z83239-2|CAB05802.1| 182|Caenorhabditis elegans Hypothetical
protein T09F5.2 protein.
Length = 182
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 552 TRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLY 454
T +LPP + T + R+ P+ TP +LY
Sbjct: 114 TSSELPPTITKELTAAISRSEPSTSTPAPTILY 146
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 546 PQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARP 436
P+ PP S +P P GTP+ +L P+ P
Sbjct: 576 PRGTPPSRRSSETMVPLRSPPFGTPIQNLLTMPIVPP 612
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 546 PQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARP 436
P+ PP S +P P GTP+ +L P+ P
Sbjct: 867 PRGTPPSRRSSETMVPLRSPPFGTPIQNLLTMPIVPP 903
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 546 PQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARP 436
P+ PP S +P P GTP+ +L P+ P
Sbjct: 882 PRGTPPSRRSSETMVPLRSPPFGTPIQNLLTMPIVPP 918
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 546 PQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARP 436
P+ PP S +P P GTP+ +L P+ P
Sbjct: 882 PRGTPPSRRSSETMVPLRSPPFGTPIQNLLTMPIVPP 918
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 546 PQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARP 436
P+ PP S +P P GTP+ +L P+ P
Sbjct: 576 PRGTPPSRRSSETMVPLRSPPFGTPIQNLLTMPIVPP 612
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 546 PQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARP 436
P+ PP S +P P GTP+ +L P+ P
Sbjct: 867 PRGTPPSRRSSETMVPLRSPPFGTPIQNLLTMPIVPP 903
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 546 PQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARP 436
P+ PP S +P P GTP+ +L P+ P
Sbjct: 882 PRGTPPSRRSSETMVPLRSPPFGTPIQNLLTMPIVPP 918
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 546 PQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARP 436
P+ PP S +P P GTP+ +L P+ P
Sbjct: 882 PRGTPPSRRSSETMVPLRSPPFGTPIQNLLTMPIVPP 918
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 156 TSLTWKNRPRKTSLCQGTVQTTNTGFSPDVTKTTIKLLQMAMSTLSGTRTT 308
T LT + R++S G+ QTT P T TT +S++ TRT+
Sbjct: 300 TLLTTETETRESS-STGSTQTTTPSTEPSTTITTPMEQSSTVSSVQKTRTS 349
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 200 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTM 379
S+N N+Q +++HQ ++ N + N N NG+ F V + + N++ T
Sbjct: 463 SQNNNNSQKQQKQSNGKSHHQHSSHQNNHQKSNGNSNGHARGFAAVRDSSHDTNASNETD 522
Query: 380 IR 385
IR
Sbjct: 523 IR 524
>U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical
protein T14E8.2 protein.
Length = 315
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 340 VDNNKERQVSIVVRVPDRVDIAICNNL 260
V NN++ Q +VV +PD+ D I L
Sbjct: 202 VQNNRKLQPGVVVHIPDKPDTGIVEPL 228
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 420 LLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSGSST 527
L++ +++P + LPS P+ S ++T + SST
Sbjct: 86 LIYFFMIVPLTSSILPSQSSPILPSDISTIYQKSST 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,096,705
Number of Sequences: 27780
Number of extensions: 319468
Number of successful extensions: 1265
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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