Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k05f
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongat... 261 1e-69
U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated ... 261 1e-69
BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associat... 261 1e-69
BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associat... 261 1e-69
BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associat... 261 1e-69
BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associat... 244 2e-64
U37558-1|AAA79202.1| 150|Homo sapiens OCP2 protein. 240 3e-63
L49176-1|AAB50032.1| 47|Homo sapiens OCP2 protein. 89 1e-17
L49170-1|AAB50264.1| 47|Homo sapiens OCP2 protein. 89 1e-17
L49173-1|AAB50265.1| 47|Homo sapiens OCP2 protein. 82 1e-15
L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr... 30 5.4
>Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongation
factor-like protein protein.
Length = 163
Score = 261 bits (640), Expect = 1e-69
Identities = 127/160 (79%), Positives = 133/160 (83%), Gaps = 1/160 (0%)
Frame = +1
Query: 118 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 294
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 295 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 474
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 475 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594
KTVANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated p19
protein.
Length = 163
Score = 261 bits (640), Expect = 1e-69
Identities = 127/160 (79%), Positives = 133/160 (83%), Gaps = 1/160 (0%)
Frame = +1
Query: 118 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 294
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 295 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 474
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 475 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594
KTVANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 261 bits (640), Expect = 1e-69
Identities = 127/160 (79%), Positives = 133/160 (83%), Gaps = 1/160 (0%)
Frame = +1
Query: 118 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 294
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 295 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 474
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 475 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594
KTVANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 261 bits (640), Expect = 1e-69
Identities = 127/160 (79%), Positives = 133/160 (83%), Gaps = 1/160 (0%)
Frame = +1
Query: 118 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 294
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 295 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 474
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 475 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594
KTVANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 261 bits (640), Expect = 1e-69
Identities = 127/160 (79%), Positives = 133/160 (83%), Gaps = 1/160 (0%)
Frame = +1
Query: 118 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 294
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 295 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 474
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 475 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594
KTVANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 160
Score = 244 bits (597), Expect = 2e-64
Identities = 121/153 (79%), Positives = 126/153 (82%), Gaps = 1/153 (0%)
Frame = +1
Query: 118 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 294
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 295 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 474
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 475 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQV 573
KTVANMIKGKTPEEIRKTFNIKNDFT EE QV
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQV 153
>U37558-1|AAA79202.1| 150|Homo sapiens OCP2 protein.
Length = 150
Score = 240 bits (587), Expect = 3e-63
Identities = 117/147 (79%), Positives = 121/147 (82%), Gaps = 1/147 (0%)
Frame = +1
Query: 157 FVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQWATYHKDDPPLPE 333
F VDVEIAK SVTIKT PLPNVN+AILKKVIQW T+HKDDPP PE
Sbjct: 1 FEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPE 60
Query: 334 DDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE 513
DDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE
Sbjct: 61 DDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE 120
Query: 514 EIRKTFNIKNDFTAAEEDQVRKENEWC 594
EIRKTFNIKNDFT EE QVRKEN+WC
Sbjct: 121 EIRKTFNIKNDFTEEEEAQVRKENQWC 147
>L49176-1|AAB50032.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +1
Query: 343 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 483
NKEK+TDDI WD +FLKV QGTLFELILAANYLDIKGLLDVTCKTV
Sbjct: 1 NKEKQTDDIPVWDQEFLKVAQGTLFELILAANYLDIKGLLDVTCKTV 47
>L49170-1|AAB50264.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +1
Query: 343 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 483
NKEK+TDDI WD +FLKV QGTLFELILAANYLDIKGLLDVTCKTV
Sbjct: 1 NKEKQTDDIPVWDQEFLKVAQGTLFELILAANYLDIKGLLDVTCKTV 47
>L49173-1|AAB50265.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 82.2 bits (194), Expect = 1e-15
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1
Query: 343 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 483
N+EKRTD I +WD FLK+D GTLFE+ILAANYLDIKGLLDV CKTV
Sbjct: 1 NEEKRTDAIPAWDQKFLKIDPGTLFEVILAANYLDIKGLLDVPCKTV 47
>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated protein
1B protein.
Length = 2468
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 301 TY-HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQ 405
TY H D PP P D + R D+S D + L ++Q
Sbjct: 2194 TYKHMDPPPAPVQDRSPSPRHPDVSMVDPEALAIEQ 2229
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,494,122
Number of Sequences: 237096
Number of extensions: 1323410
Number of successful extensions: 3097
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3089
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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