BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12k05f (596 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81084-6|CAB03110.1| 176|Caenorhabditis elegans Hypothetical pr... 212 1e-55 Z81072-16|CAB03027.1| 176|Caenorhabditis elegans Hypothetical p... 212 1e-55 AF440505-1|AAL34093.1| 170|Caenorhabditis elegans SKR-1 protein. 212 1e-55 Z81084-3|CAB03108.1| 174|Caenorhabditis elegans Hypothetical pr... 177 4e-45 AF440506-1|AAL34094.1| 174|Caenorhabditis elegans SKR-2 protein. 177 4e-45 Z83109-7|CAB05516.1| 167|Caenorhabditis elegans Hypothetical pr... 161 5e-40 AF440507-1|AAL34095.1| 167|Caenorhabditis elegans SKR-3 protein. 161 5e-40 AL117207-10|CAB60402.1| 159|Caenorhabditis elegans Hypothetical... 146 8e-36 Z92786-7|CAB07209.1| 145|Caenorhabditis elegans Hypothetical pr... 146 1e-35 AF440508-1|AAL34096.1| 144|Caenorhabditis elegans SKR-5 protein. 146 1e-35 AF440509-1|AAL34097.1| 194|Caenorhabditis elegans SKR-7 protein. 103 1e-22 AC024790-7|AAF60641.1| 194|Caenorhabditis elegans Skp1 related ... 103 1e-22 U60980-1|AAB17536.1| 172|Caenorhabditis elegans protein ( Caeno... 102 2e-22 CU457737-6|CAM36327.1| 194|Caenorhabditis elegans Hypothetical ... 102 2e-22 CU457737-3|CAM36324.1| 172|Caenorhabditis elegans Hypothetical ... 102 2e-22 AF440513-1|AAL34101.1| 172|Caenorhabditis elegans SKR-12 protein. 102 2e-22 AF440510-1|AAL34098.1| 194|Caenorhabditis elegans SKR-8 protein. 102 2e-22 AL110479-12|CAB54358.1| 192|Caenorhabditis elegans Hypothetical... 101 4e-22 AF440512-1|AAL34100.1| 192|Caenorhabditis elegans SKR-10 protein. 101 4e-22 AF440515-1|AAL34103.1| 174|Caenorhabditis elegans SKR-14 protein. 99 1e-21 AC024790-6|AAF60635.1| 197|Caenorhabditis elegans Skp1 related ... 99 1e-21 Z93377-5|CAB07579.1| 195|Caenorhabditis elegans Hypothetical pr... 100 2e-21 CU457737-4|CAM36325.1| 194|Caenorhabditis elegans Hypothetical ... 99 2e-21 AF440511-1|AAL34099.1| 194|Caenorhabditis elegans SKR-9 protein. 99 2e-21 CU457737-5|CAM36326.1| 172|Caenorhabditis elegans Hypothetical ... 99 3e-21 AF440514-1|AAL34102.1| 172|Caenorhabditis elegans SKR-13 protein. 99 3e-21 AL023837-2|CAB63347.1| 199|Caenorhabditis elegans Hypothetical ... 89 2e-18 U39849-9|AAA81051.1| 180|Caenorhabditis elegans Skp1 related (u... 83 1e-16 AF440517-1|AAL34105.1| 180|Caenorhabditis elegans SKR-17 protein. 83 1e-16 Z50755-5|CAA90636.1| 173|Caenorhabditis elegans Hypothetical pr... 81 6e-16 AF440519-1|AAL34107.1| 173|Caenorhabditis elegans SKR-20 protein. 81 6e-16 AF440516-1|AAL34104.1| 184|Caenorhabditis elegans SKR-15 protein. 73 2e-13 AF099917-7|AAC68782.1| 184|Caenorhabditis elegans Skp1 related ... 73 2e-13 AF045646-12|AAL32222.1| 183|Caenorhabditis elegans Hypothetical... 70 1e-12 Z50755-3|CAA90635.1| 182|Caenorhabditis elegans Hypothetical pr... 66 2e-11 AF440518-1|AAL34106.1| 155|Caenorhabditis elegans SKR-19 protein. 66 2e-11 U41991-2|AAA83342.2| 181|Caenorhabditis elegans Skp1 related (u... 65 3e-11 Z70210-1|CAA94149.1| 176|Caenorhabditis elegans Hypothetical pr... 59 3e-09 AF440520-1|AAL34108.1| 172|Caenorhabditis elegans SKR-21 protein. 59 3e-09 AL032639-1|CAA21638.1| 373|Caenorhabditis elegans Hypothetical ... 36 0.017 Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 28 4.4 Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 28 4.4 L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 28 4.4 >Z81084-6|CAB03110.1| 176|Caenorhabditis elegans Hypothetical protein F46A9.5 protein. Length = 176 Score = 212 bits (518), Expect = 1e-55 Identities = 102/163 (62%), Positives = 118/163 (72%), Gaps = 3/163 (1%) Frame = +1 Query: 115 KMPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKK 285 K IK+ SSDNE+F+V + + S TI T P+ NV ++ILKK Sbjct: 12 KEREIKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKK 71 Query: 286 VIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLD 465 VI W +H DP ED +N+EKRTDDI SWD +FLKVDQGTLFELILAANYLDIKGLLD Sbjct: 72 VISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLD 131 Query: 466 VTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594 VTCKTVANMIKGK+PEEIR+TFNIKNDFT EE+Q+RKEN WC Sbjct: 132 VTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWC 174 >Z81072-16|CAB03027.1| 176|Caenorhabditis elegans Hypothetical protein F46A9.5 protein. Length = 176 Score = 212 bits (518), Expect = 1e-55 Identities = 102/163 (62%), Positives = 118/163 (72%), Gaps = 3/163 (1%) Frame = +1 Query: 115 KMPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKK 285 K IK+ SSDNE+F+V + + S TI T P+ NV ++ILKK Sbjct: 12 KEREIKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKK 71 Query: 286 VIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLD 465 VI W +H DP ED +N+EKRTDDI SWD +FLKVDQGTLFELILAANYLDIKGLLD Sbjct: 72 VISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLD 131 Query: 466 VTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594 VTCKTVANMIKGK+PEEIR+TFNIKNDFT EE+Q+RKEN WC Sbjct: 132 VTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWC 174 >AF440505-1|AAL34093.1| 170|Caenorhabditis elegans SKR-1 protein. Length = 170 Score = 212 bits (518), Expect = 1e-55 Identities = 102/163 (62%), Positives = 118/163 (72%), Gaps = 3/163 (1%) Frame = +1 Query: 115 KMPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKK 285 K IK+ SSDNE+F+V + + S TI T P+ NV ++ILKK Sbjct: 6 KEREIKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKK 65 Query: 286 VIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLD 465 VI W +H DP ED +N+EKRTDDI SWD +FLKVDQGTLFELILAANYLDIKGLLD Sbjct: 66 VISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLD 125 Query: 466 VTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594 VTCKTVANMIKGK+PEEIR+TFNIKNDFT EE+Q+RKEN WC Sbjct: 126 VTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWC 168 >Z81084-3|CAB03108.1| 174|Caenorhabditis elegans Hypothetical protein F46A9.4 protein. Length = 174 Score = 177 bits (432), Expect = 4e-45 Identities = 92/172 (53%), Positives = 116/172 (67%), Gaps = 4/172 (2%) Frame = +1 Query: 91 EHSNT*KNKMPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPN 261 E S KN+ IK+ SSD+E+F+V + + S T+ T P+ N Sbjct: 6 EASEAAKNR--EIKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQN 63 Query: 262 VNSAILKKVIQWATYHKDDPPLPEDDENKEKRTD-DISSWDADFLKVDQGTLFELILAAN 438 V ++ILKKVI W T H+ DP +P +D EK+TD I WD FL +DQGTLFELILAAN Sbjct: 64 VTASILKKVINWCTKHQSDP-IPTEDS--EKKTDGSIQDWDKKFLDIDQGTLFELILAAN 120 Query: 439 YLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594 YLDIKGLLDV C++VANMIKGK+P+EIR+ FNIK+DFTA E +Q+RKEN WC Sbjct: 121 YLDIKGLLDVACQSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWC 172 >AF440506-1|AAL34094.1| 174|Caenorhabditis elegans SKR-2 protein. Length = 174 Score = 177 bits (432), Expect = 4e-45 Identities = 92/172 (53%), Positives = 116/172 (67%), Gaps = 4/172 (2%) Frame = +1 Query: 91 EHSNT*KNKMPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPN 261 E S KN+ IK+ SSD+E+F+V + + S T+ T P+ N Sbjct: 6 EASEAAKNR--EIKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQN 63 Query: 262 VNSAILKKVIQWATYHKDDPPLPEDDENKEKRTD-DISSWDADFLKVDQGTLFELILAAN 438 V ++ILKKVI W T H+ DP +P +D EK+TD I WD FL +DQGTLFELILAAN Sbjct: 64 VTASILKKVINWCTKHQSDP-IPTEDS--EKKTDGSIQDWDKKFLDIDQGTLFELILAAN 120 Query: 439 YLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594 YLDIKGLLDV C++VANMIKGK+P+EIR+ FNIK+DFTA E +Q+RKEN WC Sbjct: 121 YLDIKGLLDVACQSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWC 172 >Z83109-7|CAB05516.1| 167|Caenorhabditis elegans Hypothetical protein F44G3.6 protein. Length = 167 Score = 161 bits (390), Expect = 5e-40 Identities = 83/159 (52%), Positives = 104/159 (65%), Gaps = 3/159 (1%) Frame = +1 Query: 127 IKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKKVIQW 297 IKL SSD++ F V ++ S TI PL V S IL+K+I W Sbjct: 10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITW 69 Query: 298 ATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 477 +H DD P + DENK +T DIS WDA+F+KVDQGTLFE+ILAANYLDI+GLLDVT + Sbjct: 70 CEHHADDEP-KKVDENK--KTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLLDVTTQ 126 Query: 478 TVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594 VANM+KGKTP +IR FNI+NDF+ E + ++KEN WC Sbjct: 127 NVANMMKGKTPSQIRTLFNIENDFSEEEREAMKKENAWC 165 >AF440507-1|AAL34095.1| 167|Caenorhabditis elegans SKR-3 protein. Length = 167 Score = 161 bits (390), Expect = 5e-40 Identities = 83/159 (52%), Positives = 104/159 (65%), Gaps = 3/159 (1%) Frame = +1 Query: 127 IKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKKVIQW 297 IKL SSD++ F V ++ S TI PL V S IL+K+I W Sbjct: 10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITW 69 Query: 298 ATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 477 +H DD P + DENK +T DIS WDA+F+KVDQGTLFE+ILAANYLDI+GLLDVT + Sbjct: 70 CEHHADDEP-KKVDENK--KTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLLDVTTQ 126 Query: 478 TVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594 VANM+KGKTP +IR FNI+NDF+ E + ++KEN WC Sbjct: 127 NVANMMKGKTPSQIRTLFNIENDFSEEEREAMKKENAWC 165 >AL117207-10|CAB60402.1| 159|Caenorhabditis elegans Hypothetical protein Y60A3A.18 protein. Length = 159 Score = 146 bits (355), Expect = 8e-36 Identities = 78/157 (49%), Positives = 100/157 (63%), Gaps = 1/157 (0%) Frame = +1 Query: 127 IKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 306 IKL SSD++ F V ++ S TI PLP V SAIL+K+I W + Sbjct: 10 IKLISSDDKTFTVSRKVISQSKTIS--------GFTSEDTIPLPKVTSAILEKIITWCEH 61 Query: 307 HKDDPPLP-EDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 483 H DD P E E K+T +IS WDA+F+KVDQGTLFE+ILAANYLDI+GLL+VT + V Sbjct: 62 HADDEPKKVEKIEKGNKKTVEISEWDAEFMKVDQGTLFEIILAANYLDIRGLLEVTTQNV 121 Query: 484 ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWC 594 ANM+KGKTP ++R F I N F+ E + ++K N WC Sbjct: 122 ANMMKGKTPSQVRTLFKIDN-FSEEELEAMKKGNAWC 157 >Z92786-7|CAB07209.1| 145|Caenorhabditis elegans Hypothetical protein F47H4.10 protein. Length = 145 Score = 146 bits (353), Expect = 1e-35 Identities = 73/141 (51%), Positives = 94/141 (66%) Frame = +1 Query: 124 NIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWAT 303 ++K+ +SD+ F+V +IA S + PL NV S I KKVI+W Sbjct: 7 DVKIVTSDDVEFIVSPKIANQSKLLADFVVLNQREPI-----PLKNVTSEIFKKVIEWCE 61 Query: 304 YHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 483 YH +D P P D+ +EKRTDDI WD +FLKVD+GTLFEL+LAA YLDIKGL +VTCK++ Sbjct: 62 YHAEDIPKPPDNV-EEKRTDDIGEWDVEFLKVDKGTLFELVLAATYLDIKGLFNVTCKSI 120 Query: 484 ANMIKGKTPEEIRKTFNIKND 546 AN IKGK+PEEIR FN+ N+ Sbjct: 121 ANSIKGKSPEEIRAVFNLGNE 141 >AF440508-1|AAL34096.1| 144|Caenorhabditis elegans SKR-5 protein. Length = 144 Score = 146 bits (353), Expect = 1e-35 Identities = 73/141 (51%), Positives = 94/141 (66%) Frame = +1 Query: 124 NIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWAT 303 ++K+ +SD+ F+V +IA S + PL NV S I KKVI+W Sbjct: 6 DVKIVTSDDVEFIVSPKIANQSKLLADFVVLNQREPI-----PLKNVTSEIFKKVIEWCE 60 Query: 304 YHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 483 YH +D P P D+ +EKRTDDI WD +FLKVD+GTLFEL+LAA YLDIKGL +VTCK++ Sbjct: 61 YHAEDIPKPPDNV-EEKRTDDIGEWDVEFLKVDKGTLFELVLAATYLDIKGLFNVTCKSI 119 Query: 484 ANMIKGKTPEEIRKTFNIKND 546 AN IKGK+PEEIR FN+ N+ Sbjct: 120 ANSIKGKSPEEIRAVFNLGNE 140 >AF440509-1|AAL34097.1| 194|Caenorhabditis elegans SKR-7 protein. Length = 194 Score = 103 bits (246), Expect = 1e-22 Identities = 55/152 (36%), Positives = 82/152 (53%), Gaps = 1/152 (0%) Frame = +1 Query: 130 KLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATY 306 K++SSD +V+ + E K S T+ P+ NV I+K VI+W Sbjct: 24 KVESSDGQVYEISDEAVKQSNTLSNLISTCVANDVASMDPIPITNVTGNIMKMVIEWCEK 83 Query: 307 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 486 HK + LP +D++ K + WD +FLK+D LF+LI+A+N+LD+ GL+ CK VA Sbjct: 84 HKGET-LPVEDDSVPKNIT-VPEWDTNFLKIDNDVLFDLIVASNFLDVPGLMSYACKMVA 141 Query: 487 NMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 582 NM GK+P+E+R F I D ++ KE Sbjct: 142 NMAIGKSPDEMRVLFAIPTDEEDEAAEKAAKE 173 >AC024790-7|AAF60641.1| 194|Caenorhabditis elegans Skp1 related (ubiquitin ligasecomplex component) protein 7 protein. Length = 194 Score = 103 bits (246), Expect = 1e-22 Identities = 55/152 (36%), Positives = 82/152 (53%), Gaps = 1/152 (0%) Frame = +1 Query: 130 KLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATY 306 K++SSD +V+ + E K S T+ P+ NV I+K VI+W Sbjct: 24 KVESSDGQVYEISDEAVKQSNTLSNLISTCVANDVASMDPIPITNVTGNIMKMVIEWCEK 83 Query: 307 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 486 HK + LP +D++ K + WD +FLK+D LF+LI+A+N+LD+ GL+ CK VA Sbjct: 84 HKGET-LPVEDDSVPKNIT-VPEWDTNFLKIDNDVLFDLIVASNFLDVPGLMSYACKMVA 141 Query: 487 NMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 582 NM GK+P+E+R F I D ++ KE Sbjct: 142 NMAIGKSPDEMRVLFAIPTDEEDEAAEKAAKE 173 >U60980-1|AAB17536.1| 172|Caenorhabditis elegans protein ( Caenorhabditis elegansSkp1p homolog mRNA, complete cds. ). Length = 172 Score = 102 bits (245), Expect = 2e-22 Identities = 52/110 (47%), Positives = 69/110 (62%) Frame = +1 Query: 250 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 429 P+ NVN + KV +W HK D +PED+ N K T I WD FLK++ LF+LIL Sbjct: 59 PVTNVNGKTMAKVAEWCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 116 Query: 430 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 579 A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+ ++ Sbjct: 117 ASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGINTDEQDAAEETAQR 166 >CU457737-6|CAM36327.1| 194|Caenorhabditis elegans Hypothetical protein C52D10.9 protein. Length = 194 Score = 102 bits (245), Expect = 2e-22 Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 1/152 (0%) Frame = +1 Query: 130 KLQSSDNEVFVVDVEIAKCS-VTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 306 K++S+D +VF + E K S + P+ NV ILK VI+W Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEK 83 Query: 307 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 486 HK + LP +D++ K + + WD +FLK+D LF+LI+A NYLD+ GL++ CK VA Sbjct: 84 HKGEA-LPVEDDSVPKNIN-VPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVA 141 Query: 487 NMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 582 NM GK+P+E+R F I D ++ KE Sbjct: 142 NMAIGKSPDELRIIFAIPTDEEDEAAERAAKE 173 >CU457737-3|CAM36324.1| 172|Caenorhabditis elegans Hypothetical protein C52D10.6 protein. Length = 172 Score = 102 bits (245), Expect = 2e-22 Identities = 52/110 (47%), Positives = 69/110 (62%) Frame = +1 Query: 250 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 429 P+ NVN + KV +W HK D +PED+ N K T I WD FLK++ LF+LIL Sbjct: 59 PVTNVNGKTMAKVAEWCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 116 Query: 430 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 579 A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+ ++ Sbjct: 117 ASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGINTDEQDAAEETAQR 166 >AF440513-1|AAL34101.1| 172|Caenorhabditis elegans SKR-12 protein. Length = 172 Score = 102 bits (245), Expect = 2e-22 Identities = 52/110 (47%), Positives = 69/110 (62%) Frame = +1 Query: 250 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 429 P+ NVN + KV +W HK D +PED+ N K T I WD FLK++ LF+LIL Sbjct: 59 PVTNVNGKTMAKVAEWCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 116 Query: 430 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 579 A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+ ++ Sbjct: 117 ASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGINTDEQDAAEETAQR 166 >AF440510-1|AAL34098.1| 194|Caenorhabditis elegans SKR-8 protein. Length = 194 Score = 102 bits (245), Expect = 2e-22 Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 1/152 (0%) Frame = +1 Query: 130 KLQSSDNEVFVVDVEIAKCS-VTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 306 K++S+D +VF + E K S + P+ NV ILK VI+W Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEK 83 Query: 307 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 486 HK + LP +D++ K + + WD +FLK+D LF+LI+A NYLD+ GL++ CK VA Sbjct: 84 HKGEA-LPVEDDSVPKNIN-VPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVA 141 Query: 487 NMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 582 NM GK+P+E+R F I D ++ KE Sbjct: 142 NMAIGKSPDELRIIFAIPTDEEDEAAERAAKE 173 >AL110479-12|CAB54358.1| 192|Caenorhabditis elegans Hypothetical protein Y105C5B.13 protein. Length = 192 Score = 101 bits (242), Expect = 4e-22 Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 1/152 (0%) Frame = +1 Query: 130 KLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATY 306 K++S+D VF + E K S T+ P+ NV ILK VI+W Sbjct: 22 KVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEK 81 Query: 307 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 486 HK + LP DD++ K + WD +FLK+D LF+LI+A NYLD+ GL++ CK VA Sbjct: 82 HKGEA-LPVDDDSVPKHIT-VPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVA 139 Query: 487 NMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 582 M GK+P+E+R F I D ++ KE Sbjct: 140 MMAIGKSPDELRIIFAIPTDEEDEAAERAAKE 171 >AF440512-1|AAL34100.1| 192|Caenorhabditis elegans SKR-10 protein. Length = 192 Score = 101 bits (242), Expect = 4e-22 Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 1/152 (0%) Frame = +1 Query: 130 KLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATY 306 K++S+D VF + E K S T+ P+ NV ILK VI+W Sbjct: 22 KVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEK 81 Query: 307 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 486 HK + LP DD++ K + WD +FLK+D LF+LI+A NYLD+ GL++ CK VA Sbjct: 82 HKGEA-LPVDDDSVPKHIT-VPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVA 139 Query: 487 NMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 582 M GK+P+E+R F I D ++ KE Sbjct: 140 MMAIGKSPDELRIIFAIPTDEEDEAAERAAKE 171 >AF440515-1|AAL34103.1| 174|Caenorhabditis elegans SKR-14 protein. Length = 174 Score = 99 bits (238), Expect = 1e-21 Identities = 51/105 (48%), Positives = 66/105 (62%) Frame = +1 Query: 250 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 429 P+ NVN ++KV +W H D +PED+ N K T I WD FLK++ LF+LIL Sbjct: 65 PVTNVNGKTMEKVAEWCEKHNADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 122 Query: 430 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEE 564 A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E Sbjct: 123 ASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAE 167 >AC024790-6|AAF60635.1| 197|Caenorhabditis elegans Skp1 related (ubiquitin ligasecomplex component) protein 14 protein. Length = 197 Score = 99 bits (238), Expect = 1e-21 Identities = 51/105 (48%), Positives = 66/105 (62%) Frame = +1 Query: 250 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 429 P+ NVN ++KV +W H D +PED+ N K T I WD FLK++ LF+LIL Sbjct: 88 PVTNVNGKTMEKVAEWCEKHNADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 145 Query: 430 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEE 564 A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E Sbjct: 146 ASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAE 190 >Z93377-5|CAB07579.1| 195|Caenorhabditis elegans Hypothetical protein F13A7.9 protein. Length = 195 Score = 99.5 bits (237), Expect = 2e-21 Identities = 57/151 (37%), Positives = 80/151 (52%), Gaps = 6/151 (3%) Frame = +1 Query: 130 KLQSSDNEVFVVDVEIAKCSVTIK-TXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 306 KL S D + F + + AK S+ + P+ V IL VI+W Sbjct: 24 KLVSEDKQEFTISAKAAKKSIVLNDVISRRAPEDSAPMAPIPVEKVTGDILNMVIKWCEQ 83 Query: 307 HKDDPPLPEDDENKEKRTD--DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 480 K+D LP DD + K+ D D+ WDADFLK+ LF+LI+A N LD+ GL++ CK Sbjct: 84 RKEDE-LPVDDGSIPKKIDKIDVPQWDADFLKISSDVLFDLIVACNELDVPGLMNYGCKM 142 Query: 481 VANMIKGKTPEEIRKTFNI---KNDFTAAEE 564 VA+M GK+PE++R + I K D AAE+ Sbjct: 143 VADMAAGKSPEDMRTIYGIPTDKQDADAAEK 173 >CU457737-4|CAM36325.1| 194|Caenorhabditis elegans Hypothetical protein C52D10.7 protein. Length = 194 Score = 99.1 bits (236), Expect = 2e-21 Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 1/152 (0%) Frame = +1 Query: 130 KLQSSDNEVFVVDVEIAKCS-VTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 306 K++S+D +VF + E K S + P+ NV ILK VI+W Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVIGNILKMVIEWCEK 83 Query: 307 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 486 HK + LP +D++ K + + WD +FLK+D LF+LI+A NYLD+ GL++ CK VA Sbjct: 84 HKGEA-LPVEDDSVPKHVN-VPEWDTNFLKIDNDVLFDLIVACNYLDVPGLMNYGCKIVA 141 Query: 487 NMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 582 M GK+P+E+R F I D ++ KE Sbjct: 142 MMAIGKSPDELRIIFAIPTDEEDEAAERAAKE 173 >AF440511-1|AAL34099.1| 194|Caenorhabditis elegans SKR-9 protein. Length = 194 Score = 99.1 bits (236), Expect = 2e-21 Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 1/152 (0%) Frame = +1 Query: 130 KLQSSDNEVFVVDVEIAKCS-VTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 306 K++S+D +VF + E K S + P+ NV ILK VI+W Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVIGNILKMVIEWCEK 83 Query: 307 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 486 HK + LP +D++ K + + WD +FLK+D LF+LI+A NYLD+ GL++ CK VA Sbjct: 84 HKGEA-LPVEDDSVPKHVN-VPEWDTNFLKIDNDVLFDLIVACNYLDVPGLMNYGCKIVA 141 Query: 487 NMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 582 M GK+P+E+R F I D ++ KE Sbjct: 142 MMAIGKSPDELRIIFAIPTDEEDEAAERAAKE 173 >CU457737-5|CAM36326.1| 172|Caenorhabditis elegans Hypothetical protein C52D10.8 protein. Length = 172 Score = 98.7 bits (235), Expect = 3e-21 Identities = 52/110 (47%), Positives = 68/110 (61%) Frame = +1 Query: 250 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 429 P+ NVN + KV + HK D +PED+ N K T I WD FLK++ LF+LIL Sbjct: 59 PVTNVNGKTMAKVAELCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 116 Query: 430 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 579 A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+ +K Sbjct: 117 ASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAEETAQK 166 >AF440514-1|AAL34102.1| 172|Caenorhabditis elegans SKR-13 protein. Length = 172 Score = 98.7 bits (235), Expect = 3e-21 Identities = 52/110 (47%), Positives = 68/110 (61%) Frame = +1 Query: 250 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 429 P+ NVN + KV + HK D +PED+ N K T I WD FLK++ LF+LIL Sbjct: 59 PVTNVNGKTMAKVAELCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 116 Query: 430 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 579 A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+ +K Sbjct: 117 ASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAEETAQK 166 >AL023837-2|CAB63347.1| 199|Caenorhabditis elegans Hypothetical protein Y37H2C.2 protein. Length = 199 Score = 89.4 bits (212), Expect = 2e-18 Identities = 43/105 (40%), Positives = 66/105 (62%) Frame = +1 Query: 250 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 429 PL V++ I +K+I++ + PL +I WD++FLK+DQ TLF+L+L Sbjct: 98 PLTKVDAKIFEKIIEYCEHQGTPRPL---------LNGEIGEWDSEFLKLDQNTLFDLVL 148 Query: 430 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEE 564 AANYL+I+ L DVT + +ANM+K TP +IR F + N ++AE+ Sbjct: 149 AANYLNIENLFDVTTQFIANMMKNNTPSQIRARFGVSNKHSSAED 193 >U39849-9|AAA81051.1| 180|Caenorhabditis elegans Skp1 related (ubiquitin ligasecomplex component) protein 17 protein. Length = 180 Score = 83.4 bits (197), Expect = 1e-16 Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 4/141 (2%) Frame = +1 Query: 127 IKLQSSDNEVFVVDVEIAKCSVTIK-TXXXXXXXXXXXXXXXPLP--NVNSAILKKVIQW 297 ++L SSD + D+ S T+ T P+P NV LK +I+W Sbjct: 25 LQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEW 84 Query: 298 ATYHKDDPPLPEDDENKEKRTDDISSWDADFL-KVDQGTLFELILAANYLDIKGLLDVTC 474 HK+D P E K+K+ I SWD FL ++ LF+LI AA +LD+ GL++ C Sbjct: 85 CDKHKEDDPAIALAE-KDKKNICIPSWDRHFLSRLPMSNLFDLITAAYHLDVTGLINYGC 143 Query: 475 KTVANMIKGKTPEEIRKTFNI 537 KTVAN KGK EE+R+ F I Sbjct: 144 KTVANSAKGKNAEEMRELFGI 164 >AF440517-1|AAL34105.1| 180|Caenorhabditis elegans SKR-17 protein. Length = 180 Score = 83.4 bits (197), Expect = 1e-16 Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 4/141 (2%) Frame = +1 Query: 127 IKLQSSDNEVFVVDVEIAKCSVTIK-TXXXXXXXXXXXXXXXPLP--NVNSAILKKVIQW 297 ++L SSD + D+ S T+ T P+P NV LK +I+W Sbjct: 25 LQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEW 84 Query: 298 ATYHKDDPPLPEDDENKEKRTDDISSWDADFL-KVDQGTLFELILAANYLDIKGLLDVTC 474 HK+D P E K+K+ I SWD FL ++ LF+LI AA +LD+ GL++ C Sbjct: 85 CDKHKEDDPAIALAE-KDKKNICIPSWDRHFLSRLPMSNLFDLITAAYHLDVTGLINYGC 143 Query: 475 KTVANMIKGKTPEEIRKTFNI 537 KTVAN KGK EE+R+ F I Sbjct: 144 KTVANSAKGKNAEEMRELFGI 164 >Z50755-5|CAA90636.1| 173|Caenorhabditis elegans Hypothetical protein R12H7.5 protein. Length = 173 Score = 81.0 bits (191), Expect = 6e-16 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 2/150 (1%) Frame = +1 Query: 121 PNIKLQSSDNEVFVVDVEIAK-CSVTIKTXXXXXXXXXXXXXXXP-LPNVNSAILKKVIQ 294 P KL+S D ++F V+ K C+ + P L +S+I++ VI+ Sbjct: 8 PLYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQAVIE 67 Query: 295 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 474 W YH D PL D + R D S WD F V+ G LF L+ A++ L ++ L+++ C Sbjct: 68 WL-YHYQDNPLARRDS--KIRYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGC 124 Query: 475 KTVANMIKGKTPEEIRKTFNIKNDFTAAEE 564 A +I+GK+ EEIRK + I++D EE Sbjct: 125 AAAAELIRGKSTEEIRKIYGIRSDEEQMEE 154 >AF440519-1|AAL34107.1| 173|Caenorhabditis elegans SKR-20 protein. Length = 173 Score = 81.0 bits (191), Expect = 6e-16 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 2/150 (1%) Frame = +1 Query: 121 PNIKLQSSDNEVFVVDVEIAK-CSVTIKTXXXXXXXXXXXXXXXP-LPNVNSAILKKVIQ 294 P KL+S D ++F V+ K C+ + P L +S+I++ VI+ Sbjct: 8 PLYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQAVIE 67 Query: 295 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 474 W YH D PL D + R D S WD F V+ G LF L+ A++ L ++ L+++ C Sbjct: 68 WL-YHYQDNPLARRDS--KIRYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGC 124 Query: 475 KTVANMIKGKTPEEIRKTFNIKNDFTAAEE 564 A +I+GK+ EEIRK + I++D EE Sbjct: 125 AAAAELIRGKSTEEIRKIYGIRSDEEQMEE 154 >AF440516-1|AAL34104.1| 184|Caenorhabditis elegans SKR-15 protein. Length = 184 Score = 72.5 bits (170), Expect = 2e-13 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%) Frame = +1 Query: 133 LQSSDNEVFVVDVEIAKCSVTIK---TXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWAT 303 ++S+D V + + K S T+ T P+ VN LK V++W Sbjct: 23 IESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWCE 82 Query: 304 YHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 483 +HK DP +PE + + WD F+ ++ L +L+ A+N+L++ LL CK + Sbjct: 83 HHKADP-VPEAYPSGNTV---LPVWDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFI 138 Query: 484 ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 582 A + KG +PEE+R F I D + ++ KE Sbjct: 139 AGLAKGMSPEEMRVFFCIPTDEEDEKAERFGKE 171 >AF099917-7|AAC68782.1| 184|Caenorhabditis elegans Skp1 related (ubiquitin ligasecomplex component) protein 15 protein. Length = 184 Score = 72.5 bits (170), Expect = 2e-13 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%) Frame = +1 Query: 133 LQSSDNEVFVVDVEIAKCSVTIK---TXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWAT 303 ++S+D V + + K S T+ T P+ VN LK V++W Sbjct: 23 IESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWCE 82 Query: 304 YHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 483 +HK DP +PE + + WD F+ ++ L +L+ A+N+L++ LL CK + Sbjct: 83 HHKADP-VPEAYPSGNTV---LPVWDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFI 138 Query: 484 ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 582 A + KG +PEE+R F I D + ++ KE Sbjct: 139 AGLAKGMSPEEMRVFFCIPTDEEDEKAERFGKE 171 >AF045646-12|AAL32222.1| 183|Caenorhabditis elegans Hypothetical protein F56B3.12 protein. Length = 183 Score = 70.1 bits (164), Expect = 1e-12 Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 4/141 (2%) Frame = +1 Query: 127 IKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLP-NVNSAILKKVIQWA 300 ++L SS+ EV D+ + S TI T P+P + + L +I+W Sbjct: 29 LQLASSNGEVLQADIRALQLSSTISTTIKELGYDKEDCAEIKPIPVDEHEYTLDLLIKWC 88 Query: 301 TYHK-DDPPLPEDDENKEKRTDDISSWDADFLKV-DQGTLFELILAANYLDIKGLLDVTC 474 HK DDP + + ++ K+K I SWD F V G L +I AA LDI GL++ Sbjct: 89 DQHKGDDPEIAKAEKGKKKVV--IPSWDQHFFSVLPMGNLLAVIKAAYDLDITGLVNYGT 146 Query: 475 KTVANMIKGKTPEEIRKTFNI 537 +TVA+ I GK+ EE+R+ F + Sbjct: 147 QTVASRINGKSAEEMREIFQL 167 >Z50755-3|CAA90635.1| 182|Caenorhabditis elegans Hypothetical protein R12H7.3 protein. Length = 182 Score = 65.7 bits (153), Expect = 2e-11 Identities = 33/86 (38%), Positives = 47/86 (54%) Frame = +1 Query: 262 VNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANY 441 + + +++KVI+W +HK DPP E E T+DI WDA FL V LF++I AA Sbjct: 57 IPATVMRKVIEWCDHHKHDPPYDES----EPETNDIPDWDASFLMVRHNMLFDIIRAARD 112 Query: 442 LDIKGLLDVTCKTVANMIKGKTPEEI 519 + GL + C+ V G+ P EI Sbjct: 113 FTVPGLFAMCCRVV-----GQNPREI 133 >AF440518-1|AAL34106.1| 155|Caenorhabditis elegans SKR-19 protein. Length = 155 Score = 65.7 bits (153), Expect = 2e-11 Identities = 33/86 (38%), Positives = 47/86 (54%) Frame = +1 Query: 262 VNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANY 441 + + +++KVI+W +HK DPP E E T+DI WDA FL V LF++I AA Sbjct: 57 IPATVMRKVIEWCDHHKHDPPYDES----EPETNDIPDWDASFLMVRHNMLFDIIRAARD 112 Query: 442 LDIKGLLDVTCKTVANMIKGKTPEEI 519 + GL + C+ V G+ P EI Sbjct: 113 FTVPGLFAMCCRVV-----GQNPREI 133 >U41991-2|AAA83342.2| 181|Caenorhabditis elegans Skp1 related (ubiquitin ligasecomplex component) protein 16 protein. Length = 181 Score = 65.3 bits (152), Expect = 3e-11 Identities = 46/144 (31%), Positives = 63/144 (43%), Gaps = 1/144 (0%) Frame = +1 Query: 133 LQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATYHK 312 L SSD E F D C K + V L +V++W H+ Sbjct: 34 LISSDGEKFQTD---GHCIRHSKVLMQASKSLETPDTPIQVEKVQGDTLNRVLEWCNNHR 90 Query: 313 DDPPLPEDDENKEKRTDDISSWDADFLK-VDQGTLFELILAANYLDIKGLLDVTCKTVAN 489 DD + + WD +LK +D L +LI A+N L ++ L+D CKTVAN Sbjct: 91 DDGKYVSQCGPSLR----LPQWDFRWLKDLDNQELVDLINASNDLQMQQLMDYACKTVAN 146 Query: 490 MIKGKTPEEIRKTFNIKNDFTAAE 561 M KGK P ++R+ F I D AE Sbjct: 147 MAKGKNPAQLRELFGILTDEEEAE 170 >Z70210-1|CAA94149.1| 176|Caenorhabditis elegans Hypothetical protein K08H2.1 protein. Length = 176 Score = 58.8 bits (136), Expect = 3e-09 Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 1/150 (0%) Frame = +1 Query: 121 PNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXXPLP-NVNSAILKKVIQW 297 P K+QS D +VF V+ + S K PL ++ S +L K+I+W Sbjct: 8 PVFKIQSCDGQVFAVEDWFIQKS---KCFSVVLAQMNNLVQPHPLKTSICSFVLVKIIEW 64 Query: 298 ATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 477 +H+++ D++ +R +++WD F++ + L L AA L+I GLLDV C+ Sbjct: 65 CYHHRNE------DQDHAQRI--LTAWDVQFIRTNSAILLHLAEAAFRLEIVGLLDVACR 116 Query: 478 TVANMIKGKTPEEIRKTFNIKNDFTAAEED 567 V+ M+ G+T E++ + + ++E+ Sbjct: 117 AVSIML-GRTLNEVKLMLRVGGVESPSDEE 145 >AF440520-1|AAL34108.1| 172|Caenorhabditis elegans SKR-21 protein. Length = 172 Score = 58.8 bits (136), Expect = 3e-09 Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 1/150 (0%) Frame = +1 Query: 121 PNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXXPLP-NVNSAILKKVIQW 297 P K+QS D +VF V+ + S K PL ++ S +L K+I+W Sbjct: 4 PVFKIQSCDGQVFAVEDWFIQKS---KCFSVVLAQMNNLVQPHPLKTSICSFVLVKIIEW 60 Query: 298 ATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 477 +H+++ D++ +R +++WD F++ + L L AA L+I GLLDV C+ Sbjct: 61 CYHHRNE------DQDHAQRI--LTAWDVQFIRTNSAILLHLAEAAFRLEIVGLLDVACR 112 Query: 478 TVANMIKGKTPEEIRKTFNIKNDFTAAEED 567 V+ M+ G+T E++ + + ++E+ Sbjct: 113 AVSIML-GRTLNEVKLMLRVGGVESPSDEE 141 >AL032639-1|CAA21638.1| 373|Caenorhabditis elegans Hypothetical protein F18A11.5 protein. Length = 373 Score = 36.3 bits (80), Expect = 0.017 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = +1 Query: 250 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLK-VDQGTLFELI 426 P+PNV +K V+ W H+ + P S+W+ D++K +D+ L + I Sbjct: 270 PVPNVKGITMKMVVTWCIRHRVEVP-------------STSTWEVDYVKSLDREELKDAI 316 Query: 427 LAANYLDIKGLLDVT 471 AA YL + L+++T Sbjct: 317 WAAKYLRMPILINIT 331 >Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical protein F20C5.6 protein. Length = 347 Score = 28.3 bits (60), Expect = 4.4 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +1 Query: 313 DDPPLPEDDENKEKRTDDISSWD 381 DD + +DD+NK ++D WD Sbjct: 320 DDTMIDQDDDNKSTHSEDSDGWD 342 >Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical protein F20C5.6 protein. Length = 347 Score = 28.3 bits (60), Expect = 4.4 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +1 Query: 313 DDPPLPEDDENKEKRTDDISSWD 381 DD + +DD+NK ++D WD Sbjct: 320 DDTMIDQDDDNKSTHSEDSDGWD 342 >L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related protein 1 protein. Length = 1845 Score = 28.3 bits (60), Expect = 4.4 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 349 EKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKG 501 E+ D+ D + K G +FE + A YLD LD T + + +M++G Sbjct: 1707 EEEIDEGQEEDIEVPKA-MGDIFESVAGAIYLDSGRNLDTTWQVIFHMMRG 1756 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,422,379 Number of Sequences: 27780 Number of extensions: 244136 Number of successful extensions: 812 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 736 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 769 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1268802960 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -