Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12k04f
         (582 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC...    30   2.0  
AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical...    30   2.0  
AY058600-1|AAL13829.1|  497|Drosophila melanogaster LD29238p pro...    30   2.6  
AF427473-1|AAL18868.1|  497|Drosophila melanogaster dd4 protein ...    30   2.6  
AE013599-63|AAF57339.1|  495|Drosophila melanogaster CG2682-PC, ...    30   2.6  
AE013599-62|AAF57340.2|  497|Drosophila melanogaster CG2682-PA, ...    30   2.6  
AF145610-1|AAD38585.1|  597|Drosophila melanogaster BcDNA.GH0290...    29   4.6  
AE014298-2083|AAF48408.2|  597|Drosophila melanogaster CG9009-PA...    29   4.6  
AE013599-3481|AAF46909.2|  467|Drosophila melanogaster CG12490-P...    29   6.1  
BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p pro...    28   8.0  
AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein.       28   8.0  
AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein.       28   8.0  
AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein.       28   8.0  
AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein.       28   8.0  
AF132191-1|AAD34779.1| 1013|Drosophila melanogaster unknown prot...    28   8.0  
AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB...    28   8.0  
AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC...    28   8.0  
AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD...    28   8.0  
AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB...    28   8.0  
AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA...    28   8.0  

>AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC,
           isoform C protein.
          Length = 1526

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -1

Query: 441 KSSRDLGQGPEGDFHSRD-NHWSGNLALSSQDGGDDLVERLAKVRNHSGFSFRVLQSIRQ 265
           K+S  LGQG  G+  S + +  SG      Q GG     R     N  G   R + S   
Sbjct: 274 KNSDILGQGLGGNSDSYNGSSSSGRYQQQDQQGGSHRGSRSNYHSNSDGSYNRSINS-NS 332

Query: 264 VGNGHCGEVQSGNG 223
           VG G  G V SG+G
Sbjct: 333 VGGGGSGAVGSGSG 346


>AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1526

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -1

Query: 441 KSSRDLGQGPEGDFHSRD-NHWSGNLALSSQDGGDDLVERLAKVRNHSGFSFRVLQSIRQ 265
           K+S  LGQG  G+  S + +  SG      Q GG     R     N  G   R + S   
Sbjct: 274 KNSDILGQGLGGNSDSYNGSSSSGRYQQQDQQGGSHRGSRSNYHSNSDGSYNRSINS-NS 332

Query: 264 VGNGHCGEVQSGNG 223
           VG G  G V SG+G
Sbjct: 333 VGGGGSGAVGSGSG 346


>AY058600-1|AAL13829.1|  497|Drosophila melanogaster LD29238p
           protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 564 YTSRDGNTN*SHFVSCEHGVHDHVEGILQVRNQNRVSYRALKSSRDLGQGPEGDFHSRDN 385
           Y  R+ N   SH  + +H  H    G+   +N +     A+ ++     G  GD  S+D+
Sbjct: 111 YQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESAAIAATDGNSMGASGDNDSKDS 170

Query: 384 H 382
           H
Sbjct: 171 H 171


>AF427473-1|AAL18868.1|  497|Drosophila melanogaster dd4 protein
           protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 564 YTSRDGNTN*SHFVSCEHGVHDHVEGILQVRNQNRVSYRALKSSRDLGQGPEGDFHSRDN 385
           Y  R+ N   SH  + +H  H    G+   +N +     A+ ++     G  GD  S+D+
Sbjct: 111 YQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESAAIAATDGNSMGASGDNDSKDS 170

Query: 384 H 382
           H
Sbjct: 171 H 171


>AE013599-63|AAF57339.1|  495|Drosophila melanogaster CG2682-PC,
           isoform C protein.
          Length = 495

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 564 YTSRDGNTN*SHFVSCEHGVHDHVEGILQVRNQNRVSYRALKSSRDLGQGPEGDFHSRDN 385
           Y  R+ N   SH  + +H  H    G+   +N +     A+ ++     G  GD  S+D+
Sbjct: 111 YQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESAAIAATDGNSMGASGDNDSKDS 170

Query: 384 H 382
           H
Sbjct: 171 H 171


>AE013599-62|AAF57340.2|  497|Drosophila melanogaster CG2682-PA,
           isoform A protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 564 YTSRDGNTN*SHFVSCEHGVHDHVEGILQVRNQNRVSYRALKSSRDLGQGPEGDFHSRDN 385
           Y  R+ N   SH  + +H  H    G+   +N +     A+ ++     G  GD  S+D+
Sbjct: 111 YQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESAAIAATDGNSMGASGDNDSKDS 170

Query: 384 H 382
           H
Sbjct: 171 H 171


>AF145610-1|AAD38585.1|  597|Drosophila melanogaster BcDNA.GH02901
           protein.
          Length = 597

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 10/164 (6%)
 Frame = +1

Query: 115 IQSPYTSAAVLPYLETALNQMMAALHAGEKIEAV-PVTIP---ALDLTAMTIPDLSNALQ 282
           +Q P   A  LP L       + A+ AG  +  V PV  P   A  LT      L   + 
Sbjct: 125 LQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVS 184

Query: 283 DPKTEPAMIPYLGQALNEVVTAVLTGQSQVATPVIIPAMEVSLWTLTE------ISAALE 444
              T       +G+   ++  AV+   ++ A P    A++ S  T T+      + A  E
Sbjct: 185 GFATLSQASKLVGR---QIPIAVVRTSAEEALPE--GAIDFSELTSTQNVRYEDLKAPKE 239

Query: 445 SPVTNPVLVPYLENALNVIMDAMFAGHEVTSICVSIPAGVPLEL 576
           +   + V +P+      +    M + + +TS C  + A +PL+L
Sbjct: 240 ASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDL 283


>AE014298-2083|AAF48408.2|  597|Drosophila melanogaster CG9009-PA
           protein.
          Length = 597

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 10/164 (6%)
 Frame = +1

Query: 115 IQSPYTSAAVLPYLETALNQMMAALHAGEKIEAV-PVTIP---ALDLTAMTIPDLSNALQ 282
           +Q P   A  LP L       + A+ AG  +  V PV  P   A  LT      L   + 
Sbjct: 125 LQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVS 184

Query: 283 DPKTEPAMIPYLGQALNEVVTAVLTGQSQVATPVIIPAMEVSLWTLTE------ISAALE 444
              T       +G+   ++  AV+   ++ A P    A++ S  T T+      + A  E
Sbjct: 185 GFATLSQASKLVGR---QIPIAVVRTSAEEALPE--GAIDFSELTSTQNVRYEDLKAPKE 239

Query: 445 SPVTNPVLVPYLENALNVIMDAMFAGHEVTSICVSIPAGVPLEL 576
           +   + V +P+      +    M + + +TS C  + A +PL+L
Sbjct: 240 ASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDL 283


>AE013599-3481|AAF46909.2|  467|Drosophila melanogaster CG12490-PA
           protein.
          Length = 467

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  VAFGYQTTWTVHELSNAIQSPYTSAAVLPYLETAL 168
           +AF +   W V    NA++S Y +   L Y+E++L
Sbjct: 180 LAFAWCAIWFVFAADNAVESRYITQEELHYIESSL 214


>BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p
           protein.
          Length = 1105

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 2/121 (1%)
 Frame = +1

Query: 214 VPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVL--TGQSQVATPVI 387
           VPV +     T M  P    A + P T P +    GQ    +    L  T  +Q A+   
Sbjct: 551 VPVAVLPTAATRMAKPATEPATELPVTTPPIAT--GQTTRVIRKTPLFPTSATQAASDSY 608

Query: 388 IPAMEVSLWTLTEISAALESPVTNPVLVPYLENALNVIMDAMFAGHEVTSICVSIPAGVP 567
                        + AA+ +PV  P  +P +  A       + A    ++   S P  +P
Sbjct: 609 ATIQGTLASQAKAVGAAISAPVVRPAKLPTVAKATTASQSDIKATAAASATLGSQPENLP 668

Query: 568 L 570
           L
Sbjct: 669 L 669


>AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein.
          Length = 1413

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 2/121 (1%)
 Frame = +1

Query: 214  VPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVL--TGQSQVATPVI 387
            VPV +     T M  P    A + P T P +    GQ    +    L  T  +Q A+   
Sbjct: 747  VPVAVLPTAATRMAKPATEPATELPVTTPPIAT--GQTTRVIRKTPLFPTSATQAASDSY 804

Query: 388  IPAMEVSLWTLTEISAALESPVTNPVLVPYLENALNVIMDAMFAGHEVTSICVSIPAGVP 567
                         + AA+ +PV  P  +P +  A       + A    ++   S P  +P
Sbjct: 805  ATIQGTLASQAKAVGAAISAPVVRPAKLPTVAKATTASQSDIKATAAASATLGSQPENLP 864

Query: 568  L 570
            L
Sbjct: 865  L 865


>AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein.
          Length = 1413

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 2/121 (1%)
 Frame = +1

Query: 214  VPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVL--TGQSQVATPVI 387
            VPV +     T M  P    A + P T P +    GQ    +    L  T  +Q A+   
Sbjct: 747  VPVAVLPTAATRMAKPATEPATELPVTTPPIAT--GQTTRVIRKTPLFPTSATQAASDSY 804

Query: 388  IPAMEVSLWTLTEISAALESPVTNPVLVPYLENALNVIMDAMFAGHEVTSICVSIPAGVP 567
                         + AA+ +PV  P  +P +  A       + A    ++   S P  +P
Sbjct: 805  ATIQGTLASQAKAVGAAISAPVVRPAKLPTVAKATTASQSDIKATAAASATLGSQPENLP 864

Query: 568  L 570
            L
Sbjct: 865  L 865


>AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein.
          Length = 1413

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 2/121 (1%)
 Frame = +1

Query: 214  VPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVL--TGQSQVATPVI 387
            VPV +     T M  P    A + P T P +    GQ    +    L  T  +Q A+   
Sbjct: 747  VPVAVLPTAATRMAKPATEPATELPVTTPPIAT--GQTTRVIRKTPLFPTSATQAASDSY 804

Query: 388  IPAMEVSLWTLTEISAALESPVTNPVLVPYLENALNVIMDAMFAGHEVTSICVSIPAGVP 567
                         + AA+ +PV  P  +P +  A       + A    ++   S P  +P
Sbjct: 805  ATIQGTLASQAKAVGAAISAPVVRPAKLPTVAKATTASQSDIKATAAASATLGSQPENLP 864

Query: 568  L 570
            L
Sbjct: 865  L 865


>AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein.
          Length = 1413

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 2/121 (1%)
 Frame = +1

Query: 214  VPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVL--TGQSQVATPVI 387
            VPV +     T M  P    A + P T P +    GQ    +    L  T  +Q A+   
Sbjct: 747  VPVAVLPTAATRMAKPATEPATELPVTTPPIAT--GQTTRVIRKTPLFPTSATQAASDSY 804

Query: 388  IPAMEVSLWTLTEISAALESPVTNPVLVPYLENALNVIMDAMFAGHEVTSICVSIPAGVP 567
                         + AA+ +PV  P  +P +  A       + A    ++   S P  +P
Sbjct: 805  ATIQGTLASQAKAVGAAISAPVVRPAKLPTVAKATTASQSDIKATAAASATLGSQPENLP 864

Query: 568  L 570
            L
Sbjct: 865  L 865


>AF132191-1|AAD34779.1| 1013|Drosophila melanogaster unknown
           protein.
          Length = 1013

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 2/121 (1%)
 Frame = +1

Query: 214 VPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVL--TGQSQVATPVI 387
           VPV +     T M  P    A + P T P +    GQ    +    L  T  +Q A+   
Sbjct: 347 VPVAVLPTAATRMAKPATEPATELPVTTPPIAT--GQTTRVIRKTPLFPTSATQAASDSY 404

Query: 388 IPAMEVSLWTLTEISAALESPVTNPVLVPYLENALNVIMDAMFAGHEVTSICVSIPAGVP 567
                        + AA+ +PV  P  +P +  A       + A    ++   S P  +P
Sbjct: 405 ATIQGTLASQAKAVGAAISAPVVRPAKLPTVAKATTASQSDIKATAAASATLGSQPENLP 464

Query: 568 L 570
           L
Sbjct: 465 L 465


>AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB
            protein.
          Length = 1413

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 2/121 (1%)
 Frame = +1

Query: 214  VPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVL--TGQSQVATPVI 387
            VPV +     T M  P    A + P T P +    GQ    +    L  T  +Q A+   
Sbjct: 747  VPVAVLPTAATRMAKPATEPATELPVTTPPIAT--GQTTRVIRKTPLFPTSATQAASDSY 804

Query: 388  IPAMEVSLWTLTEISAALESPVTNPVLVPYLENALNVIMDAMFAGHEVTSICVSIPAGVP 567
                         + AA+ +PV  P  +P +  A       + A    ++   S P  +P
Sbjct: 805  ATIQGTLASQAKAVGAAISAPVVRPAKLPTVAKATTASQSDIKATAAASATLGSQPENLP 864

Query: 568  L 570
            L
Sbjct: 865  L 865


>AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC,
           isoform C protein.
          Length = 1573

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 199 EKIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQ-SQVA 375
           +K+ A P T+    LTA+   ++S+A  D  T P   PY  Q L +V  +  T     + 
Sbjct: 619 KKLPAAPGTVDQ-QLTALLTENMSHAELDIPTAPQDTPYALQILLDVFRSQYTSMIEHMK 677

Query: 376 TPVIIPAMEVSLWTLTEISAALES 447
           +   +P ++  +    E  A L++
Sbjct: 678 SSAYVPQVQKQIAQEQERMARLKN 701


>AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD,
           isoform D protein.
          Length = 1848

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 199 EKIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQ-SQVA 375
           +K+ A P T+    LTA+   ++S+A  D  T P   PY  Q L +V  +  T     + 
Sbjct: 619 KKLPAAPGTVDQ-QLTALLTENMSHAELDIPTAPQDTPYALQILLDVFRSQYTSMIEHMK 677

Query: 376 TPVIIPAMEVSLWTLTEISAALES 447
           +   +P ++  +    E  A L++
Sbjct: 678 SSAYVPQVQKQIAQEQERMARLKN 701


>AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB,
           isoform B protein.
          Length = 1848

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 199 EKIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQ-SQVA 375
           +K+ A P T+    LTA+   ++S+A  D  T P   PY  Q L +V  +  T     + 
Sbjct: 619 KKLPAAPGTVDQ-QLTALLTENMSHAELDIPTAPQDTPYALQILLDVFRSQYTSMIEHMK 677

Query: 376 TPVIIPAMEVSLWTLTEISAALES 447
           +   +P ++  +    E  A L++
Sbjct: 678 SSAYVPQVQKQIAQEQERMARLKN 701


>AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA,
           isoform A protein.
          Length = 1848

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 199 EKIEAVPVTIPALDLTAMTIPDLSNALQDPKTEPAMIPYLGQALNEVVTAVLTGQ-SQVA 375
           +K+ A P T+    LTA+   ++S+A  D  T P   PY  Q L +V  +  T     + 
Sbjct: 619 KKLPAAPGTVDQ-QLTALLTENMSHAELDIPTAPQDTPYALQILLDVFRSQYTSMIEHMK 677

Query: 376 TPVIIPAMEVSLWTLTEISAALES 447
           +   +P ++  +    E  A L++
Sbjct: 678 SSAYVPQVQKQIAQEQERMARLKN 701


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.130    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,708,398
Number of Sequences: 53049
Number of extensions: 654476
Number of successful extensions: 2208
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2208
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)