Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k02r
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P84051 Cluster: Histone H2A; n=60; Protostomia|Rep: His... 213 3e-54
UniRef50_P35061 Cluster: Histone H2A; n=31; Eumetazoa|Rep: Histo... 203 4e-51
UniRef50_P16104 Cluster: Histone H2A.x; n=12; Eukaryota|Rep: His... 196 3e-49
UniRef50_Q6FI13 Cluster: Histone H2A type 2-A; n=268; Eukaryota|... 196 3e-49
UniRef50_A7R6L6 Cluster: Chromosome undetermined scaffold_1333, ... 155 1e-36
UniRef50_Q9P0M6 Cluster: Core histone macro-H2A.2; n=74; Eukaryo... 145 8e-34
UniRef50_O75367 Cluster: Core histone macro-H2A.1; n=179; Eukary... 143 3e-33
UniRef50_A3CGY8 Cluster: Histone H2A; n=1; Oryza sativa (japonic... 133 3e-30
UniRef50_A2YNE9 Cluster: Histone H2A; n=1; Oryza sativa (indica ... 128 2e-28
UniRef50_Q71UI9 Cluster: Histone H2AV; n=156; Eukaryota|Rep: His... 124 3e-27
UniRef50_UPI0000498F6A Cluster: histone H2A; n=2; Entamoeba hist... 123 4e-27
UniRef50_Q12692 Cluster: Histone H2A.Z; n=65; Eukaryota|Rep: His... 122 1e-26
UniRef50_P48003 Cluster: Histone H2A.Z; n=7; Eukaryota|Rep: Hist... 118 1e-25
UniRef50_Q86EU0 Cluster: Histone H2A; n=1; Schistosoma japonicum... 117 2e-25
UniRef50_UPI0000DA3FD0 Cluster: PREDICTED: similar to Histone H2... 117 3e-25
UniRef50_A0DGQ5 Cluster: Histone H2A; n=11; Eukaryota|Rep: Histo... 116 4e-25
UniRef50_Q54WG6 Cluster: Histone H2A; n=1; Dictyostelium discoid... 114 2e-24
UniRef50_Q4QEG6 Cluster: Histone H2A, putative; n=7; Trypanosoma... 111 2e-23
UniRef50_UPI0000EB30ED Cluster: UPI0000EB30ED related cluster; n... 110 3e-23
UniRef50_P35066 Cluster: Histone H2A; n=40; Trypanosomatidae|Rep... 107 2e-22
UniRef50_Q23429 Cluster: Histone H2A; n=1; Caenorhabditis elegan... 107 3e-22
UniRef50_Q9LD75 Cluster: Histone H2A.2; n=1; Lilium longiflorum|... 105 8e-22
UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep: H... 105 1e-21
UniRef50_Q7PL33 Cluster: Histone H2A; n=1; Drosophila melanogast... 102 7e-21
UniRef50_Q54HW2 Cluster: Histone H2A domain-containing protein; ... 101 1e-20
UniRef50_A3CI01 Cluster: Histone H2A; n=1; Oryza sativa (japonic... 100 3e-20
UniRef50_Q7PDD4 Cluster: Histone H2A; n=2; Giardia intestinalis|... 99 1e-19
UniRef50_UPI0001554FEE Cluster: PREDICTED: hypothetical protein;... 97 3e-19
UniRef50_Q54LA5 Cluster: Histone H2A; n=1; Dictyostelium discoid... 95 1e-18
UniRef50_Q24CD1 Cluster: Core histone H2A/H2B/H3/H4 family prote... 93 4e-18
UniRef50_A7PZY1 Cluster: Chromosome chr8 scaffold_41, whole geno... 92 1e-17
UniRef50_UPI0000ECC705 Cluster: UPI0000ECC705 related cluster; n... 91 2e-17
UniRef50_Q00Y54 Cluster: Histone H2A; n=1; Ostreococcus tauri|Re... 89 1e-16
UniRef50_A7QA26 Cluster: Chromosome undetermined scaffold_69, wh... 88 2e-16
UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A his... 88 2e-16
UniRef50_A2XQJ2 Cluster: Histone H2A; n=2; Oryza sativa|Rep: His... 85 2e-15
UniRef50_P98176 Cluster: Histone H2A-Bbd; n=10; Eutheria|Rep: Hi... 85 2e-15
UniRef50_Q32P61 Cluster: Histone H2A; n=6; Laurasiatheria|Rep: H... 85 2e-15
UniRef50_UPI0000E494D2 Cluster: PREDICTED: hypothetical protein;... 83 5e-15
UniRef50_Q54HV9 Cluster: Histone H2A domain-containing protein; ... 83 5e-15
UniRef50_Q9XG56 Cluster: Histone H2A.1; n=1; Lilium longiflorum|... 81 3e-14
UniRef50_UPI0000EB494E Cluster: UPI0000EB494E related cluster; n... 80 6e-14
UniRef50_UPI00005A604D Cluster: PREDICTED: similar to Histone H2... 79 8e-14
UniRef50_A4VD85 Cluster: Putative uncharacterized protein; n=1; ... 79 8e-14
UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone... 77 4e-13
UniRef50_UPI0000E45ED1 Cluster: PREDICTED: similar to LOC564406 ... 77 6e-13
UniRef50_A2YA27 Cluster: Histone H2A; n=2; Eukaryota|Rep: Histon... 77 6e-13
UniRef50_UPI000050472B Cluster: RIKEN cDNA 4930557A04 gene; n=1;... 71 3e-11
UniRef50_A6NLZ7 Cluster: Histone H2A; n=3; Homo/Pan/Gorilla grou... 69 1e-10
UniRef50_P59890 Cluster: Histone H2A [Contains: Hipposin]; n=18;... 67 4e-10
UniRef50_Q54BC2 Cluster: Histone H2A; n=1; Dictyostelium discoid... 63 7e-09
UniRef50_UPI0000565024 Cluster: H2A histone family member; n=3; ... 58 3e-07
UniRef50_Q4T4T2 Cluster: Chromosome undetermined SCAF9554, whole... 55 1e-06
UniRef50_Q497L1 Cluster: Predicted; n=10; Mus musculus|Rep: Pred... 54 3e-06
UniRef50_A5BU78 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_A7PU16 Cluster: Chromosome chr7 scaffold_31, whole geno... 53 8e-06
UniRef50_Q6Z2C0 Cluster: Putative uncharacterized protein OJ1034... 52 1e-05
UniRef50_UPI0001553928 Cluster: PREDICTED: similar to H2A-Bbd; n... 51 2e-05
UniRef50_Q4SU61 Cluster: Chromosome undetermined SCAF14010, whol... 50 4e-05
UniRef50_A2RRV5 Cluster: Histone H2A; n=2; Danio rerio|Rep: Hist... 50 7e-05
UniRef50_A7SPX8 Cluster: Predicted protein; n=1; Nematostella ve... 46 9e-04
UniRef50_A5E3I3 Cluster: DNA polymerase epsilon subunit C; n=6; ... 46 9e-04
UniRef50_Q6C6M5 Cluster: DNA polymerase epsilon subunit C; n=2; ... 46 0.001
UniRef50_Q07889 Cluster: Son of sevenless homolog 1; n=70; cellu... 45 0.002
UniRef50_Q8SSG3 Cluster: Histone H2A; n=1; Encephalitozoon cunic... 42 0.015
UniRef50_A7QA25 Cluster: Chromosome undetermined scaffold_69, wh... 42 0.019
UniRef50_A2QBU3 Cluster: Function: negative co-factor 2; n=2; Eu... 41 0.034
UniRef50_Q9CR04 Cluster: Huntingtin-interacting protein HYPM; n=... 41 0.034
UniRef50_UPI0000D55F61 Cluster: PREDICTED: similar to CG33291-PA... 40 0.078
UniRef50_Q7R119 Cluster: GLP_12_46633_46109; n=1; Giardia lambli... 40 0.078
UniRef50_UPI0000E470E5 Cluster: PREDICTED: similar to CCA3; n=1;... 39 0.10
UniRef50_Q4SM72 Cluster: Chromosome 13 SCAF14555, whole genome s... 39 0.10
UniRef50_P26675 Cluster: Protein son of sevenless; n=6; Endopter... 39 0.14
UniRef50_Q9LN09 Cluster: T6D22.7; n=2; Arabidopsis thaliana|Rep:... 37 0.41
UniRef50_A4R921 Cluster: Putative uncharacterized protein; n=1; ... 37 0.55
UniRef50_Q4T188 Cluster: Chromosome undetermined SCAF10698, whol... 36 0.96
UniRef50_Q4S295 Cluster: Chromosome undetermined SCAF14764, whol... 36 0.96
UniRef50_Q4EMM9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.96
UniRef50_UPI0000DB7D43 Cluster: PREDICTED: similar to CG33291-PA... 36 1.3
UniRef50_Q4RA53 Cluster: Chromosome undetermined SCAF24460, whol... 35 1.7
UniRef50_Q9D4U4 Cluster: Histone H2A; n=1; Mus musculus|Rep: His... 35 2.2
UniRef50_Q9RZK6 Cluster: Iron ABC transporter, ATP-binding prote... 35 2.2
UniRef50_Q653P3 Cluster: Putative uncharacterized protein P0431E... 35 2.2
UniRef50_A5AMN6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_Q8SQT6 Cluster: CLASS 2 TRANSCRIPTIONAL REPRESSOR simil... 35 2.2
UniRef50_UPI000023F56A Cluster: hypothetical protein FG05498.1; ... 34 3.9
UniRef50_Q7KTV4 Cluster: CG33291-PA; n=5; Diptera|Rep: CG33291-P... 34 3.9
UniRef50_Q4REE9 Cluster: Chromosome 10 SCAF15123, whole genome s... 33 5.1
UniRef50_UPI0000D5778C Cluster: PREDICTED: similar to CG10318-PA... 33 6.7
UniRef50_Q20237 Cluster: Putative uncharacterized protein; n=3; ... 33 6.7
UniRef50_UPI00006CA409 Cluster: hypothetical protein TTHERM_0052... 33 8.9
>UniRef50_P84051 Cluster: Histone H2A; n=60; Protostomia|Rep:
Histone H2A - Drosophila melanogaster (Fruit fly)
Length = 124
Score = 213 bits (521), Expect = 3e-54
Identities = 105/106 (99%), Positives = 105/106 (99%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
NRAGLQFPVGRIHRLLR GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI
Sbjct: 19 NRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 78
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 220
IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA
Sbjct: 79 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
>UniRef50_P35061 Cluster: Histone H2A; n=31; Eumetazoa|Rep: Histone
H2A - Acropora formosa (Staghorn coral)
Length = 125
Score = 203 bits (495), Expect = 4e-51
Identities = 96/105 (91%), Positives = 104/105 (99%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
+RAGLQFPVGRIHRLLR GNYAERVGAGAPVY+AAV+EYL+AE+LELAGNAARDNKK+RI
Sbjct: 19 SRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKSRI 78
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 223
IPRHLQLA+RNDEELNKLL+GVTIAQGGVLPNIQAVLLPKKTEKK
Sbjct: 79 IPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTEKK 123
>UniRef50_P16104 Cluster: Histone H2A.x; n=12; Eukaryota|Rep:
Histone H2A.x - Homo sapiens (Human)
Length = 143
Score = 196 bits (479), Expect = 3e-49
Identities = 94/102 (92%), Positives = 99/102 (97%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
+RAGLQFPVGR+HRLLR G+YAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRI
Sbjct: 20 SRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 232
IPRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKKT
Sbjct: 80 IPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
>UniRef50_Q6FI13 Cluster: Histone H2A type 2-A; n=268;
Eukaryota|Rep: Histone H2A type 2-A - Homo sapiens
(Human)
Length = 130
Score = 196 bits (479), Expect = 3e-49
Identities = 94/103 (91%), Positives = 99/103 (96%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
+RAGLQFPVGR+HRLLR GNYAERVGAGAPVY+AAV+EYL AE+LELAGNAARDNKKTRI
Sbjct: 20 SRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRI 79
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 229
IPRHLQLAIRNDEELNKLL VTIAQGGVLPNIQAVLLPKKTE
Sbjct: 80 IPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
>UniRef50_A7R6L6 Cluster: Chromosome undetermined scaffold_1333,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1333, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 195
Score = 155 bits (376), Expect = 1e-36
Identities = 75/103 (72%), Positives = 87/103 (84%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
+AGLQFPV RI R L+ G Y++RVG GA VYLA V+EYLA EVLELA NAA DN+K RII
Sbjct: 75 KAGLQFPVSRIDRYLKKGCYSQRVGTGASVYLATVLEYLATEVLELARNAAWDNQKHRII 134
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
PRH+ LA+RNDEEL KLL+GVTIA+GGVLPNI +LLPKKT+K
Sbjct: 135 PRHVLLAVRNDEELGKLLAGVTIARGGVLPNINHILLPKKTDK 177
>UniRef50_Q9P0M6 Cluster: Core histone macro-H2A.2; n=74;
Eukaryota|Rep: Core histone macro-H2A.2 - Homo sapiens
(Human)
Length = 372
Score = 145 bits (352), Expect = 8e-34
Identities = 70/104 (67%), Positives = 81/104 (77%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
RAG+ FPVGR+ R L+ G + R+ GAPVY+AAV+EYLAAE+LELAGNAARDNKK RI
Sbjct: 18 RAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEILELAGNAARDNKKARIA 77
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 223
PRH+ LA+ NDEELN+LL GVTIA GGVLP I LL KK K
Sbjct: 78 PRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGTK 121
>UniRef50_O75367 Cluster: Core histone macro-H2A.1; n=179;
Eukaryota|Rep: Core histone macro-H2A.1 - Homo sapiens
(Human)
Length = 372
Score = 143 bits (347), Expect = 3e-33
Identities = 68/104 (65%), Positives = 82/104 (78%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
+AG+ FPVGR+ R ++ G+ R+G GAPVY+AAV+EYL AE+LELAGNAARDNKK R+
Sbjct: 18 KAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAGNAARDNKKGRVT 77
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 223
PRH+ LA+ NDEELN+LL GVTIA GGVLPNI LL KK K
Sbjct: 78 PRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSK 121
>UniRef50_A3CGY8 Cluster: Histone H2A; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
japonica (Rice)
Length = 158
Score = 133 bits (322), Expect = 3e-30
Identities = 74/124 (59%), Positives = 84/124 (67%), Gaps = 23/124 (18%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELA------------ 394
++AGLQFPVGRI R L+ G YAERVGAGAPVYLAAV+EYLAAEV ++
Sbjct: 21 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVAIVSVFLDPFDMRYCR 80
Query: 393 -----------GNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVL 247
G DNKKTRI+PRH+QLA+RNDEEL KLL G TIA GGV+PNI L
Sbjct: 81 ESVGIGCWSSPGTRRGDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHL 140
Query: 246 LPKK 235
LPKK
Sbjct: 141 LPKK 144
>UniRef50_A2YNE9 Cluster: Histone H2A; n=1; Oryza sativa (indica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
indica (Rice)
Length = 180
Score = 128 bits (308), Expect = 2e-28
Identities = 71/122 (58%), Positives = 82/122 (67%), Gaps = 18/122 (14%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAA------------------VMEYLAAE 409
+AGLQFPVG I R L+ G Y +RVG GAP+YLAA V L +
Sbjct: 18 KAGLQFPVGHIGRYLKKGRYTQRVGIGAPIYLAAEASPIVYLFLYQSFQPSMVNRDLLMK 77
Query: 408 VLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 229
VLELAGN A DNKK RIIPRH+ LAIRND+EL KLL+GVTIA GGVLPNI VLLPK+
Sbjct: 78 VLELAGNMAWDNKKNRIIPRHVLLAIRNDDELGKLLAGVTIAHGGVLPNINPVLLPKEDH 137
Query: 228 KK 223
++
Sbjct: 138 RE 139
>UniRef50_Q71UI9 Cluster: Histone H2AV; n=156; Eukaryota|Rep:
Histone H2AV - Homo sapiens (Human)
Length = 128
Score = 124 bits (298), Expect = 3e-27
Identities = 66/105 (62%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
RAGLQFPVGRIHR L+ + RVGA A VY AA++EYL AEVLELAGNA++D K RI
Sbjct: 23 RAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 82
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 223
PRHLQLAIR DEEL+ L+ TIA GGV+P+I L+ KK ++K
Sbjct: 83 TPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGQQK 126
>UniRef50_UPI0000498F6A Cluster: histone H2A; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: histone H2A - Entamoeba
histolytica HM-1:IMSS
Length = 159
Score = 123 bits (297), Expect = 4e-27
Identities = 60/105 (57%), Positives = 73/105 (69%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
++GLQFPV RIH L+ G Y E + A VYL AV+EYL AEVLELAG A+D KTRI
Sbjct: 50 KSGLQFPVARIHAALKKGRYGEHINKMASVYLTAVIEYLVAEVLELAGGQAKDFHKTRIT 109
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 220
PRH+QLA+R+D ELN LL VTI+ GGV PN+ + K +K A
Sbjct: 110 PRHIQLAVRSDLELNDLLKDVTISYGGVFPNVPTAVNSKGKKKPA 154
>UniRef50_Q12692 Cluster: Histone H2A.Z; n=65; Eukaryota|Rep:
Histone H2A.Z - Saccharomyces cerevisiae (Baker's yeast)
Length = 134
Score = 122 bits (293), Expect = 1e-26
Identities = 69/108 (63%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLL-RNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
RAGLQFPVGRI R L R+ RVG+ A +YL AV+EYL AEVLELAGNAA+D K RI
Sbjct: 28 RAGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRI 87
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA*K 214
PRHLQLAIR D+EL+ L+ TIA GGVLP+I LL K EKK K
Sbjct: 88 TPRHLQLAIRGDDELDSLIR-ATIASGGVLPHINKALL-LKVEKKGSK 133
>UniRef50_P48003 Cluster: Histone H2A.Z; n=7; Eukaryota|Rep: Histone
H2A.Z - Schizosaccharomyces pombe (Fission yeast)
Length = 171
Score = 118 bits (284), Expect = 1e-25
Identities = 66/104 (63%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
RAGLQFPVGR+ R L+ RVGA + VY AAV+EYL AEVLELAGNAA+D K RI
Sbjct: 61 RAGLQFPVGRVRRFLKAKTQNNMRVGAKSAVYSAAVLEYLTAEVLELAGNAAKDLKVKRI 120
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
PRHLQLAIR DEEL+ L+ TIA GGVLP+I LL + EK
Sbjct: 121 TPRHLQLAIRGDEELDTLIR-ATIAGGGVLPHINKQLLIRTKEK 163
>UniRef50_Q86EU0 Cluster: Histone H2A; n=1; Schistosoma
japonicum|Rep: Histone H2A - Schistosoma japonicum
(Blood fluke)
Length = 156
Score = 117 bits (282), Expect = 2e-25
Identities = 56/101 (55%), Positives = 70/101 (69%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
NRAGL V R+HR ++ G YA R A VY++AV+EYL AEV EL+GNAA+ NK+ I
Sbjct: 20 NRAGLVISVSRVHRYMKKGRYARRTSIAASVYMSAVIEYLVAEVNELSGNAAKANKRKTI 79
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 235
PRH+ L +RND ELN+LL V I+ GGVLP I LL +K
Sbjct: 80 TPRHIMLGVRNDAELNELLKHVHISHGGVLPCIHPALLKRK 120
>UniRef50_UPI0000DA3FD0 Cluster: PREDICTED: similar to Histone H2A
type 1; n=2; Euarchontoglires|Rep: PREDICTED: similar to
Histone H2A type 1 - Rattus norvegicus
Length = 177
Score = 117 bits (281), Expect = 3e-25
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = -3
Query: 408 VLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 229
+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL VTIAQGGVLPNIQAVLLPKKTE
Sbjct: 68 ILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTE 127
>UniRef50_A0DGQ5 Cluster: Histone H2A; n=11; Eukaryota|Rep: Histone
H2A - Paramecium tetraurelia
Length = 183
Score = 116 bits (280), Expect = 4e-25
Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
+AGLQFPVGRIHR L+ A+ RVG + VY +A++EYL AEVLELAGNA++D K RI
Sbjct: 75 KAGLQFPVGRIHRYLKQRVSAKNRVGTTSAVYTSAILEYLTAEVLELAGNASKDFKVRRI 134
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 232
PRHLQLAIR DEEL+ +L TIA GGV+P+I L K+T
Sbjct: 135 TPRHLQLAIRGDEELD-ILIRATIAGGGVIPHIHKALFGKQT 175
>UniRef50_Q54WG6 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 154
Score = 114 bits (274), Expect = 2e-24
Identities = 61/107 (57%), Positives = 71/107 (66%), Gaps = 2/107 (1%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
RAG+ FPV R+ RLLR G +A RV + APVYLAAV+EYL E+LELA N +KKTRI
Sbjct: 40 RAGITFPVSRVDRLLREGRFAPRVESTAPVYLAAVLEYLVFEILELAHNTCSISKKTRIT 99
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVL--LPKKTEKKA 220
P+H+ A+ ND ELN L VTIA GGVLP Q KK KKA
Sbjct: 100 PQHINWAVGNDLELNSLFQHVTIAYGGVLPTPQQSTGEKKKKPSKKA 146
>UniRef50_Q4QEG6 Cluster: Histone H2A, putative; n=7;
Trypanosomatidae|Rep: Histone H2A, putative - Leishmania
major
Length = 177
Score = 111 bits (266), Expect = 2e-23
Identities = 59/108 (54%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYA-ERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
RA L FPVGRIH L++G Y +R GA A +Y AA++EYL EV+EL+G AA+ K RI
Sbjct: 69 RAELNFPVGRIHSRLKDGLYRKQRCGASAAIYCAALLEYLTTEVIELSGAAAKAQKTERI 128
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA*K 214
PRHL LAIR DEELN+++ TI++GGV+PN+ L KK++KK+ K
Sbjct: 129 KPRHLLLAIRGDEELNQVVK-ATISRGGVVPNVHKA-LEKKSKKKSAK 174
>UniRef50_UPI0000EB30ED Cluster: UPI0000EB30ED related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB30ED UniRef100
entry - Canis familiaris
Length = 243
Score = 110 bits (265), Expect = 3e-23
Identities = 50/80 (62%), Positives = 64/80 (80%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
+AG+ FPVGR+ R ++ G+ R+G GAPVY+AAV+EYL AE+LELAGNAARDNKK R+
Sbjct: 18 KAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAGNAARDNKKGRVT 77
Query: 354 PRHLQLAIRNDEELNKLLSG 295
PRH+ LA+ NDEELN+ G
Sbjct: 78 PRHILLAVANDEELNQKKQG 97
>UniRef50_P35066 Cluster: Histone H2A; n=40; Trypanosomatidae|Rep:
Histone H2A - Trypanosoma cruzi
Length = 135
Score = 107 bits (258), Expect = 2e-22
Identities = 55/108 (50%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAA--RDNKKTR 361
+AGL FPVGR+ LLR G YA R+GA VY+AAV+EYL AE+LEL+ AA + K R
Sbjct: 22 KAGLIFPVGRVGSLLRRGQYARRIGASGAVYMAAVLEYLTAELLELSVKAASQQAKKPKR 81
Query: 360 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK-KTEKKA 220
+ PR + LA+R+D++L LL VT+++GGV+P++ L K K+ KKA
Sbjct: 82 LTPRTVTLAVRHDDDLGMLLKDVTLSRGGVMPSLNKALAKKHKSSKKA 129
>UniRef50_Q23429 Cluster: Histone H2A; n=1; Caenorhabditis
elegans|Rep: Histone H2A - Caenorhabditis elegans
Length = 145
Score = 107 bits (257), Expect = 3e-22
Identities = 55/106 (51%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYA-ERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
R+GL FPVGRIHR LR +R+ AGA V++AA +EYL E++E++ AA ++KK+R+
Sbjct: 33 RSGLTFPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEMSAIAANESKKSRV 92
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLP-NIQAVLLPKKTEKK 223
PRHL LAI D+E +LL VT+ QGGV P I LLPKK K+
Sbjct: 93 TPRHLHLAIYGDQETAQLLDKVTLPQGGVTPMPIHPSLLPKKKAKE 138
>UniRef50_Q9LD75 Cluster: Histone H2A.2; n=1; Lilium
longiflorum|Rep: Histone H2A.2 - Lilium longiflorum
(Trumpet lily)
Length = 128
Score = 105 bits (253), Expect = 8e-22
Identities = 52/100 (52%), Positives = 67/100 (67%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
+A LQF V R+ L+ G Y R+GA APVYLAAV+E L AEVLE+A N +K+ I
Sbjct: 21 KAALQFSVSRVEYSLKKGRYCRRLGATAPVYLAAVLENLVAEVLEMAANVTEKHKRIVIK 80
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 235
PRH+ LA+RND E+NKL GVTI+ GV+P + L +K
Sbjct: 81 PRHIMLAVRNDVEVNKLFHGVTISASGVVPKTRKELDRRK 120
>UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep:
Histone H2A - Tetraodon nigroviridis (Green puffer)
Length = 258
Score = 105 bits (252), Expect = 1e-21
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = -3
Query: 384 ARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
AR+NKKTRIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQAVLLPKKTEK
Sbjct: 62 ARNNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTEK 114
>UniRef50_Q7PL33 Cluster: Histone H2A; n=1; Drosophila
melanogaster|Rep: Histone H2A - Drosophila melanogaster
(Fruit fly)
Length = 286
Score = 102 bits (245), Expect = 7e-21
Identities = 59/94 (62%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
R PVGRIHRLL GNYA G P + EVLELAGNAARDN KTRII
Sbjct: 96 RCRSSIPVGRIHRLLWKGNYA--CGCRRPSLPSCRNGISGPEVLELAGNAARDNNKTRII 153
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQG-GVLPNIQ 256
PRHL LAIRND ELN LLSGVTI QG +LP Q
Sbjct: 154 PRHLHLAIRNDTELNMLLSGVTITQGCSLLPKKQ 187
>UniRef50_Q54HW2 Cluster: Histone H2A domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: Histone H2A
domain-containing protein - Dictyostelium discoideum AX4
Length = 260
Score = 101 bits (243), Expect = 1e-20
Identities = 53/102 (51%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
RA L FPV RI +++R G + +R + APV+LAAV+EYL E+LEL+ A KTRI
Sbjct: 136 RADLTFPVSRIEKMIREGRFTKRCSSDAPVFLAAVLEYLTLEILELSITYANQKNKTRIT 195
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLL--PKK 235
P+H+ L+I D ELN LL VTIA GGV I +LL PKK
Sbjct: 196 PQHIHLSICCDAELNDLLKNVTIANGGVPKFIHPILLDTPKK 237
>UniRef50_A3CI01 Cluster: Histone H2A; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
japonica (Rice)
Length = 115
Score = 100 bits (240), Expect = 3e-20
Identities = 47/62 (75%), Positives = 53/62 (85%)
Frame = -3
Query: 411 EVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 232
+VLELAGNAARDNKK RI+PRH+QLA+RNDEEL++LL VTIA GGVLPNI LLPKK
Sbjct: 42 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKG 101
Query: 231 EK 226
K
Sbjct: 102 GK 103
>UniRef50_Q7PDD4 Cluster: Histone H2A; n=2; Giardia
intestinalis|Rep: Histone H2A - Giardia lamblia ATCC
50803
Length = 124
Score = 98.7 bits (235), Expect = 1e-19
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
RAG+ FP+GRIHR LR G YAER+ + APVYLAAV+E + AEV A N + RI+
Sbjct: 18 RAGISFPIGRIHRHLREGRYAERISSDAPVYLAAVLENVVAEVFREACNHRDKKSQKRIV 77
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGV 271
P H+ A+R D+EL + + VTI +GGV
Sbjct: 78 PNHILTALRKDKELATIFANVTIREGGV 105
>UniRef50_UPI0001554FEE Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 146
Score = 97.5 bits (232), Expect = 3e-19
Identities = 46/98 (46%), Positives = 66/98 (67%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
+RA L+F V + R LR G Y+ RV G PV+LAAV+EYL AE+LELAG+ A +++ RI
Sbjct: 26 SRAQLRFSVSLVDRFLRRGRYSRRVAEGTPVFLAAVLEYLTAELLELAGHTAGAHRRQRI 85
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLL 244
P HL+ A+R+D EL++L + + G LP + + LL
Sbjct: 86 APVHLRQAVRDDPELDRLFGDIVSSPGAGLPRLHSALL 123
>UniRef50_Q54LA5 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 143
Score = 95.5 bits (227), Expect = 1e-18
Identities = 58/110 (52%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKK---- 367
+AGL FPVGRIHR+L+N +RV + VYLAA++EYLA+EVLEL + K
Sbjct: 23 KAGLIFPVGRIHRMLKNKVPLKRVSILSSVYLAAILEYLASEVLELTISQVSIQSKEYHN 82
Query: 366 -TRIIPRHLQLAIRNDEELNKLLS-GVTIAQGGVLPNIQAVLLPKKTEKK 223
RI PRHL LAI+ DEEL+ L+ TIA GGV+P I VL KK E+K
Sbjct: 83 VRRISPRHLLLAIKTDEELDNLIRVSTTIAGGGVIPYIHEVL--KKVEQK 130
>UniRef50_Q24CD1 Cluster: Core histone H2A/H2B/H3/H4 family protein;
n=2; Tetrahymena thermophila|Rep: Core histone
H2A/H2B/H3/H4 family protein - Tetrahymena thermophila
SB210
Length = 388
Score = 93.5 bits (222), Expect = 4e-18
Identities = 44/87 (50%), Positives = 61/87 (70%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
++GL FP GR+ R L+ RV + +YLA V+EYLAAEVLE AGN A++N+ +RI
Sbjct: 286 KSGLVFPCGRLRRYLKQACKQFRVSSSCNIYLAGVLEYLAAEVLETAGNIAKNNRLSRIN 345
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGG 274
P H++ A RND ELN+ ++G IA+GG
Sbjct: 346 PVHIREAFRNDAELNQFVNGTIIAEGG 372
>UniRef50_A7PZY1 Cluster: Chromosome chr8 scaffold_41, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_41, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 404
Score = 91.9 bits (218), Expect = 1e-17
Identities = 49/84 (58%), Positives = 58/84 (69%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
+ GLQF V RI R L+ G++++RVG A VYL V LELA NAARDNKK RII
Sbjct: 53 KTGLQFSVDRIGRYLKKGHHSQRVGTDAQVYLVTV--------LELARNAARDNKKNRII 104
Query: 354 PRHLQLAIRNDEELNKLLSGVTIA 283
PRH+ +RNDEEL KLL+G TIA
Sbjct: 105 PRHVLSVVRNDEELGKLLAGATIA 128
>UniRef50_UPI0000ECC705 Cluster: UPI0000ECC705 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECC705 UniRef100 entry -
Gallus gallus
Length = 131
Score = 91.1 bits (216), Expect = 2e-17
Identities = 45/104 (43%), Positives = 65/104 (62%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
+RAGL FPV RI R LR G +AER GA APVYLAAV++++ + +++AG ++ + + I
Sbjct: 21 SRAGLLFPVSRIERQLRRGQFAERFGANAPVYLAAVLQWVTHKTMDMAGKISKKSNQQYI 80
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
P HLQ++I+N L LL +G +P Q V KT+K
Sbjct: 81 SPCHLQMSIKNSPVLKHLLGSGPKHRGRAVPKSQRVASTSKTKK 124
>UniRef50_Q00Y54 Cluster: Histone H2A; n=1; Ostreococcus tauri|Rep:
Histone H2A - Ostreococcus tauri
Length = 152
Score = 89.0 bits (211), Expect = 1e-16
Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR-- 361
+AGLQFPVGR+ R L+ G YA RVGAGAPVYLAAV+EYLAAEVLELAGNA+ + + R
Sbjct: 38 KAGLQFPVGRVARYLKQGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNASLGDPQRRGT 97
Query: 360 -IIPRH 346
PRH
Sbjct: 98 VQAPRH 103
>UniRef50_A7QA26 Cluster: Chromosome undetermined scaffold_69, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_69, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 494
Score = 88.2 bits (209), Expect = 2e-16
Identities = 44/79 (55%), Positives = 57/79 (72%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
+ GLQF + I R L+ +++R G A VYL A++EYLA EV +LA NAA+DNKK RII
Sbjct: 416 KTGLQFLICCIGRYLKKDCHSQRFGTSAQVYLTAILEYLAVEVWKLARNAAKDNKKNRII 475
Query: 354 PRHLQLAIRNDEELNKLLS 298
RH+ A+RNDEEL KLL+
Sbjct: 476 LRHVLSAMRNDEELGKLLA 494
>UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A
histone family, member X (H2AFX), mRNA; n=2; Takifugu
rubripes|Rep: Homolog of Homo sapiens "H2A histone
family, member X (H2AFX), mRNA - Takifugu rubripes
Length = 325
Score = 87.8 bits (208), Expect = 2e-16
Identities = 47/117 (40%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Frame = +1
Query: 256 LNVW*NSALSDCHTGKEFVQFLVVPYGELKMSRNNSSLLVVSCCVTGQFQNFSGQVFHDG 435
L+V ++ALSD H+ ++ VQ LVV + +L+++ +++SLLVV+ V+ Q Q+ S Q+
Sbjct: 205 LDVGQHAALSDRHSSQQLVQLLVVAHSQLQVAGDDTSLLVVAGSVSSQLQDLSRQILQHS 264
Query: 436 GQVNRCTGTNAFSVISVAQQSVYTTDRKLKTGTVRTGLDLALNFSA-FSATGHV*SL 603
GQV+R G NA S++++A+Q V T +L+ G R L L+ F+A FS+T H S+
Sbjct: 265 GQVHRSAGANALSIVALAEQPVNTAHWELEPGPRRASLGLSSGFAAGFSSTTHFVSM 321
>UniRef50_A2XQJ2 Cluster: Histone H2A; n=2; Oryza sativa|Rep:
Histone H2A - Oryza sativa subsp. indica (Rice)
Length = 276
Score = 85.0 bits (201), Expect = 2e-15
Identities = 55/99 (55%), Positives = 62/99 (62%), Gaps = 25/99 (25%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAE------------------ 409
+A LQFPVGR L+ G+YA+RVG GAPVYLAAV+EYLAAE
Sbjct: 27 KAKLQFPVGRY---LKKGHYAQRVGIGAPVYLAAVLEYLAAEASPIVYLFLYQSFQPSVV 83
Query: 408 -------VLELAGNAARDNKKTRIIPRHLQLAIRNDEEL 313
VLELA N ARDNKK RIIPRH+ LAI ND+EL
Sbjct: 84 NRDLLMQVLELARNVARDNKKNRIIPRHVLLAICNDDEL 122
>UniRef50_P98176 Cluster: Histone H2A-Bbd; n=10; Eutheria|Rep:
Histone H2A-Bbd - Homo sapiens (Human)
Length = 115
Score = 85.0 bits (201), Expect = 2e-15
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
RA L F V ++ R LR G+YA+R+ APVYLAAV+EYL A+VLELAGN A+++ + I
Sbjct: 25 RAELSFSVSQVERSLREGHYAQRLSRTAPVYLAAVIEYLTAKVLELAGNEAQNSGERNIT 84
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQ 280
P L + + ND L+ L + TI+Q
Sbjct: 85 PLLLDMVVHNDRLLSTLFNTTTISQ 109
>UniRef50_Q32P61 Cluster: Histone H2A; n=6; Laurasiatheria|Rep:
Histone H2A - Bos taurus (Bovine)
Length = 117
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/90 (44%), Positives = 54/90 (60%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
RA LQFPV R+ RLLR G +A R+ + PV+L ++EYL A +L+LAG A N + RI
Sbjct: 23 RAELQFPVSRVDRLLREGQFANRLSSATPVFLTGILEYLIANILDLAGKEACTNHRVRIS 82
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLP 265
P H+Q A+ N+E L L +Q P
Sbjct: 83 PEHVQTALVNNENLRCLFQPGAFSQPAASP 112
>UniRef50_UPI0000E494D2 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 96
Score = 83.4 bits (197), Expect = 5e-15
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = -3
Query: 531 AGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
A LQF VG +H +R GNYA+RVG GAPVY+AAV+EYL AE+LEL A DNKK+RI
Sbjct: 7 ANLQFSVGPVHWFVRKGNYAQRVGGGAPVYMAAVLEYLTAEILELTDIAVHDNKKSRI 64
>UniRef50_Q54HV9 Cluster: Histone H2A domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: Histone H2A
domain-containing protein - Dictyostelium discoideum AX4
Length = 286
Score = 83.4 bits (197), Expect = 5e-15
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
RAGL V R+ +LLR Y++RV + V+LAAV+EY+ E+LEL+ N +KK+R I
Sbjct: 183 RAGLTISVSRVEKLLRGRRYSKRVSPTSCVFLAAVLEYMVLELLELSLNELSLSKKSRRI 242
Query: 354 P-RHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
RH+ L+I D EL+ LL+ V I GGVL +I LL K ++
Sbjct: 243 KNRHINLSILKDVELSALLNDVIICSGGVLSSIHPSLLKLKKDQ 286
>UniRef50_Q9XG56 Cluster: Histone H2A.1; n=1; Lilium
longiflorum|Rep: Histone H2A.1 - Lilium longiflorum
(Trumpet lily)
Length = 110
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
+A LQF V R+ L+ G Y R+GA APVYLAAV+E L AEVL++A N + I
Sbjct: 21 KAALQFSVSRVEYSLKKGRYCRRLGATAPVYLAAVLENLVAEVLDMAANVTEETSPIVIK 80
Query: 354 PRHLQLAIRNDEELNKLLS 298
PRH+ LA RND E+ + +S
Sbjct: 81 PRHIMLAPRNDVEVEQAVS 99
>UniRef50_UPI0000EB494E Cluster: UPI0000EB494E related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB494E UniRef100
entry - Canis familiaris
Length = 103
Score = 79.8 bits (188), Expect = 6e-14
Identities = 36/74 (48%), Positives = 54/74 (72%)
Frame = -3
Query: 525 LQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRH 346
LQFP+ R+ RLLR G+YA + PV+LA+++EYL A +LELAG A ++ K R IP+H
Sbjct: 25 LQFPISRVDRLLREGHYAHCLSLSMPVFLASILEYLTANILELAGQEAHNSHKMR-IPQH 83
Query: 345 LQLAIRNDEELNKL 304
+Q A+ N++ L++L
Sbjct: 84 MQKALGNNQHLSQL 97
>UniRef50_UPI00005A604D Cluster: PREDICTED: similar to Histone
H2A-Bbd (H2A Barr body-deficient); n=2; Canis lupus
familiaris|Rep: PREDICTED: similar to Histone H2A-Bbd
(H2A Barr body-deficient) - Canis familiaris
Length = 163
Score = 79.4 bits (187), Expect = 8e-14
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
RAGL F V ++ RLLR G YA+R+GA AP++LAAV+++L A VL LAG+ AR + I
Sbjct: 73 RAGLAFSVCQMERLLRAGRYAKRLGASAPIFLAAVIQFLTATVLGLAGDEARHRRTAYIT 132
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQ 280
P + A+ N E L+ L + T++Q
Sbjct: 133 PELVDRALHNHELLSGLFTMTTVSQ 157
>UniRef50_A4VD85 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 219
Score = 79.4 bits (187), Expect = 8e-14
Identities = 46/91 (50%), Positives = 49/91 (53%)
Frame = +2
Query: 260 MFGKTPP*AIVTPERXXXXXXXXXMAS*RCLGIILVFLLSLAALPANSKTSAAKYSMXXX 439
M GKTPP AIV +A+ CLG ILVFLLSLAALPANS+TSAAKYS
Sbjct: 4 MLGKTPPSAIVVLAMSLFNSSSFLIANKICLGTILVFLLSLAALPANSRTSAAKYSKTAA 63
Query: 440 XXXXXXXXXXXXXFPLRNNLCIRPTGN*RPA 532
P NL I PTGN RPA
Sbjct: 64 KQTGAPVPILSLYLPFFKNLEILPTGNQRPA 94
>UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone 1,
H2ai; n=2; Takifugu rubripes|Rep: Homolog of Homo
sapiens "Histone 1, H2ai - Takifugu rubripes
Length = 370
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/110 (35%), Positives = 70/110 (63%)
Frame = +1
Query: 256 LNVW*NSALSDCHTGKEFVQFLVVPYGELKMSRNNSSLLVVSCCVTGQFQNFSGQVFHDG 435
L+V ++ LS+ H+ ++ VQ LVV + +L+++R+++SLLVV+ V Q Q+ SGQ+
Sbjct: 250 LDVGQHATLSNGHSSQQLVQLLVVAHSQLQVTRDDTSLLVVAGSVASQLQDLSGQILQHC 309
Query: 436 GQVNRCTGTNAFSVISVAQQSVYTTDRKLKTGTVRTGLDLALNFSAFSAT 585
GQ++R T T+A ++++ +Q V+T +L++ L L F+A AT
Sbjct: 310 GQIDRSTSTDALAIVAFPEQPVHTAHWELQSSPRGASLRLCSGFAAGFAT 359
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +1
Query: 256 LNVW*NSALSDCHTGKEFVQFLVVPYGELKMSRNNSSLLVVSCCVTGQFQNFS 414
L+V ++ALSD ++FVQ LVV + +L+++R+++SLLVV+ V Q Q S
Sbjct: 123 LDVGQHAALSDGDFSQQFVQLLVVAHSQLQVTRDDTSLLVVAGSVASQLQQRS 175
>UniRef50_UPI0000E45ED1 Cluster: PREDICTED: similar to LOC564406
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC564406 protein -
Strongylocentrotus purpuratus
Length = 338
Score = 76.6 bits (180), Expect = 6e-13
Identities = 41/72 (56%), Positives = 51/72 (70%)
Frame = -3
Query: 435 AVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 256
+V A +VLELAGNA++D K RI PRHLQLAIR DEEL+ L+ TIA GGV+P+I
Sbjct: 267 SVQPMWAYQVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIH 325
Query: 255 AVLLPKKTEKKA 220
L+ KK +KA
Sbjct: 326 KSLIGKKGSQKA 337
>UniRef50_A2YA27 Cluster: Histone H2A; n=2; Eukaryota|Rep: Histone
H2A - Oryza sativa subsp. indica (Rice)
Length = 88
Score = 76.6 bits (180), Expect = 6e-13
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLE 400
+AG QFPVGRI R L+ G YA+RVG+GAPVYLAAV+EYLAAEVLE
Sbjct: 31 KAGFQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLE 75
>UniRef50_UPI000050472B Cluster: RIKEN cDNA 4930557A04 gene; n=1;
Rattus norvegicus|Rep: RIKEN cDNA 4930557A04 gene -
Rattus norvegicus
Length = 122
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/79 (41%), Positives = 51/79 (64%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
+R L FPV ++ RLLR N ++ + APV+LA V+EYL + +L+LAG A ++ I
Sbjct: 13 SRGKLHFPVNKVERLLRERNTSKCPNSSAPVFLAGVLEYLTSNILDLAGKEAHNSGSKLI 72
Query: 357 IPRHLQLAIRNDEELNKLL 301
P H+ +AIR +E ++LL
Sbjct: 73 SPEHVTMAIRKNEGFHQLL 91
>UniRef50_A6NLZ7 Cluster: Histone H2A; n=3; Homo/Pan/Gorilla
group|Rep: Histone H2A - Homo sapiens (Human)
Length = 116
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/78 (39%), Positives = 48/78 (61%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
RA LQFPV + R LR +A + + PV+LA V+EYL A +LE G +++ + I
Sbjct: 20 RAELQFPVSHLERCLRESQHARHLSSTTPVFLAGVLEYLTANILEKVGKEVKNSCRLCIT 79
Query: 354 PRHLQLAIRNDEELNKLL 301
P H++ A++ DE+L +L
Sbjct: 80 PEHVKRALQKDEQLRWIL 97
>UniRef50_P59890 Cluster: Histone H2A [Contains: Hipposin]; n=18;
Eumetazoa|Rep: Histone H2A [Contains: Hipposin] -
Hippoglossus hippoglossus (Atlantic halibut)
Length = 52
Score = 66.9 bits (156), Expect = 4e-10
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYL 439
+RAGLQFPVGR+HRLLR GNYA RVGAGAPVYL
Sbjct: 20 SRAGLQFPVGRVHRLLRKGNYAHRVGAGAPVYL 52
>UniRef50_Q54BC2 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 226
Score = 62.9 bits (146), Expect = 7e-09
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = -3
Query: 480 NYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL 301
NY R+ + YL+AV+EYL +E+LEL+ N A K+T I PR + LAI ND EL+ +
Sbjct: 148 NYNYRISNSSMHYLSAVIEYLLSEILELSSNGAVSAKRTLIQPRDIFLAIANDIELHSMY 207
Query: 300 SGVTIAQGGVLP 265
V I GG P
Sbjct: 208 GHVIIPGGGTKP 219
>UniRef50_UPI0000565024 Cluster: H2A histone family member; n=3; Mus
musculus|Rep: H2A histone family member - Mus musculus
Length = 115
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGN-AARDNKKTR 361
+RA L F V + + LR + A R+ P++LAA++E L +LELAGN A R + R
Sbjct: 23 SRAELIFAVSLVEQHLREISRAWRLSDMVPIFLAAILESLTRRLLELAGNEAQRRGTERR 82
Query: 360 IIPRHLQLAIRNDEELNKLLSGVTIAQ 280
I P L LA+ ++ EL+ + +TI+Q
Sbjct: 83 ITPELLDLAVYSNMELSDVFQFITISQ 109
>UniRef50_Q4T4T2 Cluster: Chromosome undetermined SCAF9554, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF9554,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 329
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = -3
Query: 414 AEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKL 304
AE+LE+AGNAARD K RI PRH++LA+ ND+E N++
Sbjct: 1 AEILEMAGNAARDKNKRRITPRHMKLAVANDDEPNQV 37
>UniRef50_Q497L1 Cluster: Predicted; n=10; Mus musculus|Rep:
Predicted - Mus musculus (Mouse)
Length = 109
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = -3
Query: 522 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 343
+ P+ + R LR ++ R+ + A +L +V+EYL + +LELAG A + + P +
Sbjct: 20 ELPLSLVDRFLREEIHSSRLSSSALPFLTSVLEYLTSNILELAGEVAHTTGRKCVAPEDV 79
Query: 342 QLAIRNDEELNKLL-SGVT 289
L ++N+E+L +L SG T
Sbjct: 80 HLVVQNNEQLRQLFKSGGT 98
>UniRef50_A5BU78 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 306
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = -3
Query: 381 RDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIA 283
RDNKK RIIPRH+ +RNDEEL KLL+G TIA
Sbjct: 213 RDNKKNRIIPRHVLSVVRNDEELGKLLAGATIA 245
Score = 32.7 bits (71), Expect = 8.9
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -1
Query: 545 PVRTVPVFSFRSVVYTDCCATEITLNALVPVHRFTWPPSW 426
PV + VF+FRS+V D I LNAL + R T P W
Sbjct: 172 PVPSKLVFNFRSIVSADTLRKAIILNALELMPRSTSLPCW 211
>UniRef50_A7PU16 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 157
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAAR 379
+A LQF VG+I L++ + APVY++A +EYLA EVLEL+GN AR
Sbjct: 23 KASLQFIVGQIAHFLKSLQVIWSCSSNAPVYVSAFLEYLAVEVLELSGNVAR 74
>UniRef50_Q6Z2C0 Cluster: Putative uncharacterized protein
OJ1034_C08.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1034_C08.18 - Oryza sativa subsp. japonica (Rice)
Length = 311
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAE 409
+AGLQF V R L NG +A+RVG G PVYLAAV+ YLAAE
Sbjct: 125 KAGLQFLVSRY---LENGRHAQRVGTGTPVYLAAVLGYLAAE 163
>UniRef50_UPI0001553928 Cluster: PREDICTED: similar to H2A-Bbd; n=2;
Mus musculus|Rep: PREDICTED: similar to H2A-Bbd - Mus
musculus
Length = 172
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = -3
Query: 531 AGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARD-NKKTRII 355
A L F V + + LR+ ++A R+ P++LAA++E+L +LELAGN + + I
Sbjct: 21 AELIFTVSLVEQSLRDLSHAWRLSDMVPIFLAAILEFLTYRLLELAGNETQQRGTQMSIT 80
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQ 280
P L L + ++ +L+ + +TI+Q
Sbjct: 81 PELLDLEVYSNMQLSDVFQFITISQ 105
>UniRef50_Q4SU61 Cluster: Chromosome undetermined SCAF14010, whole
genome shotgun sequence; n=10; Tetraodontidae|Rep:
Chromosome undetermined SCAF14010, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 176
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAER 466
+RAGLQFPVGR+HRLLR GNYAER
Sbjct: 20 SRAGLQFPVGRVHRLLRKGNYAER 43
Score = 37.5 bits (83), Expect = 0.31
Identities = 24/77 (31%), Positives = 32/77 (41%)
Frame = -2
Query: 457 RCTGLPGRRHXXXXXXXXXXXXXXXXRQQED*NYS*TSSTRHKERRGTEQTPFRCDNRSR 278
R G+PG R RQQED ++ + +RRG EQ R D+R
Sbjct: 46 RRAGVPGGRAGVPDGGDPGAGRQRCPRQQEDAHHPAAPAAGRAQRRGAEQAAGRSDHRPG 105
Query: 277 RSFTKHSSGTTPEEDRE 227
R +H G +ED E
Sbjct: 106 RRAAQHPGGAAAQEDGE 122
>UniRef50_A2RRV5 Cluster: Histone H2A; n=2; Danio rerio|Rep: Histone
H2A - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 713
Score = 49.6 bits (113), Expect = 7e-05
Identities = 28/85 (32%), Positives = 49/85 (57%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
R L PV +IH LL+ ++ VY+ AV+EY++A++L+LAGN R+ + I
Sbjct: 100 RNPLALPVDKIHPLLKEV-LGYKIDHQVSVYIVAVLEYISADILKLAGNYVRNIRHYEIS 158
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQ 280
+ + +A+ D+ L +L + IA+
Sbjct: 159 QQDITVAMCADKVLMDMLHPIEIAR 183
>UniRef50_A7SPX8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 885
Score = 46.0 bits (104), Expect = 9e-04
Identities = 27/74 (36%), Positives = 39/74 (52%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
R+GL FPVGRI R L + A RV A +YLAA +EY+A E + A ++
Sbjct: 111 RSGLVFPVGRIFRWLLDMKVACRVYDAAAIYLAATLEYIAEETIYRA--VTTREVIDHVV 168
Query: 354 PRHLQLAIRNDEEL 313
P ++ + D +L
Sbjct: 169 PETVEKCVNMDPDL 182
>UniRef50_A5E3I3 Cluster: DNA polymerase epsilon subunit C; n=6;
Saccharomycetales|Rep: DNA polymerase epsilon subunit C
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 251
Score = 46.0 bits (104), Expect = 9e-04
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = -3
Query: 600 TSNMXXXXXXXXXXXXXXXXSNRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEY 421
T+N R FP RI +++++ +V PV + +E
Sbjct: 141 TTNATTTTTDQVSSERILQSFERIKTHFPAARIKKIMQSDEEIGKVAQATPVVVGRALEI 200
Query: 420 LAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGV 292
A ++E++ + A+ RI H++LAI N E+ + L+ V
Sbjct: 201 FMANLVEVSVSQAKKQGVKRITASHVKLAIENTEQFDFLMEAV 243
>UniRef50_Q6C6M5 Cluster: DNA polymerase epsilon subunit C; n=2;
Ascomycota|Rep: DNA polymerase epsilon subunit C -
Yarrowia lipolytica (Candida lipolytica)
Length = 114
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/100 (27%), Positives = 46/100 (46%)
Frame = -3
Query: 522 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 343
+FPV RI +L+++ + +V P +A +E ++E N AR R+ P HL
Sbjct: 11 RFPVARIKKLMQSDDDIGKVAQATPTAVAKALELFMISLIEETCNQARMRNSKRVSPSHL 70
Query: 342 QLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 223
+ A+ E+ + L V+ V P PK+ +K
Sbjct: 71 KQAVLETEQFDFLQDIVSKHPDAVAPATGEEEQPKRRGRK 110
>UniRef50_Q07889 Cluster: Son of sevenless homolog 1; n=70; cellular
organisms|Rep: Son of sevenless homolog 1 - Homo sapiens
(Human)
Length = 1333
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/74 (32%), Positives = 43/74 (58%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
R L PV +IH LL+ ++ VY+ AV+EY++A++L+L GN R+ + I
Sbjct: 100 RNPLSLPVEKIHPLLKEV-LGYKIDHQVSVYIVAVLEYISADILKLVGNYVRNIRHYEIT 158
Query: 354 PRHLQLAIRNDEEL 313
+ +++A+ D+ L
Sbjct: 159 KQDIKVAMCADKVL 172
>UniRef50_Q8SSG3 Cluster: Histone H2A; n=1; Encephalitozoon
cuniculi|Rep: Histone H2A - Encephalitozoon cuniculi
Length = 128
Score = 41.9 bits (94), Expect = 0.015
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = -3
Query: 468 RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVT 289
R+ A V ++A + YL +E+ + A N A + K +++P+H+ AI ND EL+ +
Sbjct: 43 RISKDALVAVSACVMYLISEITDGAKNVASTDGKKKVMPKHINNAICNDTELHFVGHDWL 102
Query: 288 IAQGGV 271
I GG+
Sbjct: 103 IKNGGM 108
>UniRef50_A7QA25 Cluster: Chromosome undetermined scaffold_69, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_69, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 97
Score = 41.5 bits (93), Expect = 0.019
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2
Query: 347 CLGIILVFLLSLAALPANSKTSA 415
CLGIIL FLLSLAA PAN KTSA
Sbjct: 40 CLGIILFFLLSLAAFPANYKTSA 62
>UniRef50_A2QBU3 Cluster: Function: negative co-factor 2; n=2;
Eurotiomycetidae|Rep: Function: negative co-factor 2 -
Aspergillus niger
Length = 295
Score = 40.7 bits (91), Expect = 0.034
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = -3
Query: 522 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 343
+FPV RI R+++ +V P+ ++ +E ++ A A+D R+ HL
Sbjct: 181 KFPVARIKRIMQADEDVGKVAQVTPIAVSKALELFMISLVTKAAREAKDRNSKRVTASHL 240
Query: 342 QLAIRNDEELNKL 304
+ A+ DE L+ L
Sbjct: 241 KQAVVKDEVLDFL 253
>UniRef50_Q9CR04 Cluster: Huntingtin-interacting protein HYPM; n=5;
Eutheria|Rep: Huntingtin-interacting protein HYPM - Mus
musculus (Mouse)
Length = 117
Score = 40.7 bits (91), Expect = 0.034
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
+R +Q PV ++R+L+ Y +G+ +L A+++YL +LE+ G+ A N + I
Sbjct: 22 SRPEVQVPVNYVYRILQEEQYTPCIGSTTSDFLLAMLDYLTDYILEVVGSEANINNQQNI 81
>UniRef50_UPI0000D55F61 Cluster: PREDICTED: similar to CG33291-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG33291-PA - Tribolium castaneum
Length = 1362
Score = 39.5 bits (88), Expect = 0.078
Identities = 32/99 (32%), Positives = 47/99 (47%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
RAGLQF +GR HR + + A V A VYL A +E L E+L + + +
Sbjct: 570 RAGLQFHIGRFHRWMTDIKLARFVHEYAAVYLCAGLENLLEEILL---QCLPSDSEVTLT 626
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 238
L+ AI N+ +L LL G + + A+ LP+
Sbjct: 627 ATLLEHAIANNGDLWGLLQPYAHLNAGRIAS-GALALPR 664
>UniRef50_Q7R119 Cluster: GLP_12_46633_46109; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_12_46633_46109 - Giardia lamblia
ATCC 50803
Length = 174
Score = 39.5 bits (88), Expect = 0.078
Identities = 26/106 (24%), Positives = 50/106 (47%)
Frame = +1
Query: 271 NSALSDCHTGKEFVQFLVVPYGELKMSRNNSSLLVVSCCVTGQFQNFSGQVFHDGGQVNR 450
+++L+DC G++ + LV+ G + +++ L ++ V ++ V DG +V+
Sbjct: 15 DASLADCDVGEDGRELLVLAEGSQDVVGDDALLALLVAVVARLPEDLCDDVLEDGREVDG 74
Query: 451 CTGTNAFSVISVAQQSVYTTDRKLKTGTVRTGLDLALNFSAFSATG 588
G +A V ++AQ +V DR+ L LA+ A G
Sbjct: 75 RVGRDALCVATLAQVTVDAPDRERDPRARGPALHLAVVLDGLGAHG 120
>UniRef50_UPI0000E470E5 Cluster: PREDICTED: similar to CCA3; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
CCA3 - Strongylocentrotus purpuratus
Length = 293
Score = 39.1 bits (87), Expect = 0.10
Identities = 26/74 (35%), Positives = 34/74 (45%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
RAGL F +GR R L + RV A +YLAA ME L +E+ A + +
Sbjct: 193 RAGLTFRIGRFFRWLVEARISSRVDDHAALYLAASMEALTSELFFRACAPYFEKTDGELT 252
Query: 354 PRHLQLAIRNDEEL 313
L I N+ EL
Sbjct: 253 QAVLDYGIANEAEL 266
>UniRef50_Q4SM72 Cluster: Chromosome 13 SCAF14555, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF14555, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 392
Score = 39.1 bits (87), Expect = 0.10
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAA---RDNKKT 364
R GL F VG+ R + + A R+ A +YLAA ME L EV +A RDN
Sbjct: 191 RCGLTFNVGKFFRWMVDSRVAVRIHEHAAIYLAACMESLFREVYARVLRSALLERDNGIP 250
Query: 363 RIIPRHLQLAIRNDEEL 313
++ L+ A+ + E+
Sbjct: 251 KLTVETLEQAVSGEAEV 267
>UniRef50_P26675 Cluster: Protein son of sevenless; n=6;
Endopterygota|Rep: Protein son of sevenless - Drosophila
melanogaster (Fruit fly)
Length = 1596
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/73 (23%), Positives = 38/73 (52%)
Frame = -3
Query: 516 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 337
P ++H LL+ ++ + +L AV+EY++A++L++AG+ I +++
Sbjct: 155 PTEKVHTLLQKDVLQYKIDSSVSAFLVAVLEYISADILKMAGDYVIKIAHCEITKEDIEV 214
Query: 336 AIRNDEELNKLLS 298
+ D L +L+
Sbjct: 215 VMNADRVLMDMLN 227
>UniRef50_Q9LN09 Cluster: T6D22.7; n=2; Arabidopsis thaliana|Rep:
T6D22.7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 37.1 bits (82), Expect = 0.41
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = -3
Query: 531 AGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIP 352
A ++FP+ RI R++R+ N A ++ A + E E A +++ +KK I
Sbjct: 106 AKIKFPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSVKDKKKFIHY 165
Query: 351 RHLQLAIRNDEELNKLLSGV 292
+HL + ND+ L V
Sbjct: 166 KHLSSVVSNDQRYEFLADSV 185
>UniRef50_A4R921 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 281
Score = 36.7 bits (81), Expect = 0.55
Identities = 15/69 (21%), Positives = 34/69 (49%)
Frame = -3
Query: 522 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 343
+FP RI R+++ +V P+ + +E ++ + + A+D R+ +HL
Sbjct: 162 RFPTARIKRIMQADEEVGKVAQQTPIAVGKALEMFMVALVSKSHDVAKDKGAKRVTAQHL 221
Query: 342 QLAIRNDEE 316
+ I +D++
Sbjct: 222 KQVIESDDQ 230
>UniRef50_Q4T188 Cluster: Chromosome undetermined SCAF10698, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10698, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1407
Score = 35.9 bits (79), Expect = 0.96
Identities = 15/45 (33%), Positives = 31/45 (68%)
Frame = -3
Query: 447 VYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEEL 313
+Y+ AV+EY++A++L+LAGN ++ + I + + +A+ D+ L
Sbjct: 153 LYMVAVLEYISADILKLAGNYVKNIRHCEISQQDITVAMCADKVL 197
>UniRef50_Q4S295 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1379
Score = 35.9 bits (79), Expect = 0.96
Identities = 15/45 (33%), Positives = 31/45 (68%)
Frame = -3
Query: 447 VYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEEL 313
+Y+ AV+EY++A++L+LAGN ++ + I + + +A+ D+ L
Sbjct: 206 LYMVAVLEYISADILKLAGNYVKNIRHCEISQQDITVAMCADKVL 250
>UniRef50_Q4EMM9 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 1/2a F6854|Rep: Putative
uncharacterized protein - Listeria monocytogenes str.
1/2a F6854
Length = 242
Score = 35.9 bits (79), Expect = 0.96
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -1
Query: 674 SLCTDVRETRVRSSAFVCYIVNFFKLQTCPVAEKAEKLRARSSPVRTVPVFSFRS 510
SLC+ T R S+F C++++F QT P A A+K ++P V +FS RS
Sbjct: 150 SLCSPFISTSKRLSSFQCFLISFLSFQT-PTARPAKK----AAPSTVVSLFSGRS 199
>UniRef50_UPI0000DB7D43 Cluster: PREDICTED: similar to CG33291-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG33291-PA - Apis mellifera
Length = 1354
Score = 35.5 bits (78), Expect = 1.3
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
+R+GLQ PVGR R + + + A +YL A +E L E+L + T +
Sbjct: 543 SRSGLQLPVGRFFRWMSDVRLGRMIHEYAAIYLTAGIENLLEEILL---QCIPSDSHTTL 599
Query: 357 IPRHLQLAIRNDEELNKLL 301
L+ AI N +L LL
Sbjct: 600 TATMLEHAIANSGDLWGLL 618
>UniRef50_Q4RA53 Cluster: Chromosome undetermined SCAF24460, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF24460,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 58
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -3
Query: 477 YAERVGAGAPVYLAAVMEYLA 415
+ R+G GAPVY+AAV+EYLA
Sbjct: 38 HKHRIGMGAPVYMAAVIEYLA 58
>UniRef50_Q9D4U4 Cluster: Histone H2A; n=1; Mus musculus|Rep:
Histone H2A - Mus musculus (Mouse)
Length = 128
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 531 AGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLEL 397
A LQFPV LL+ N ++ + + PV ++ Y+ + +LEL
Sbjct: 16 AKLQFPVSEAEHLLQERNLSKCLNSSTPVLFTDMLNYVTSSILEL 60
>UniRef50_Q9RZK6 Cluster: Iron ABC transporter, ATP-binding protein;
n=3; Bacteria|Rep: Iron ABC transporter, ATP-binding
protein - Deinococcus radiodurans
Length = 269
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 411 EVLELAGNAARDNKKTRIIPRH-LQLAIRNDEELNKLLSGVTIAQG 277
EVL+LAG RD KT ++ H L A+R +E+ L G AQG
Sbjct: 180 EVLQLAGRLNRDQGKTVVMVLHDLNQAVRYSDEIIALKGGEVYAQG 225
>UniRef50_Q653P3 Cluster: Putative uncharacterized protein
P0431E05.8; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431E05.8 - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAA 433
+AGLQFPVGRI R L+N + + A AP LAA
Sbjct: 31 KAGLQFPVGRIGRYLKNRRPVDLISA-APSPLAA 63
>UniRef50_A5AMN6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 152
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3
Query: 459 AGAPVYLAAVMEYLAAEVLELAGNA 385
AG P++L V+EYLA EVL+L NA
Sbjct: 126 AGTPIHLVIVLEYLATEVLKLLENA 150
>UniRef50_Q8SQT6 Cluster: CLASS 2 TRANSCRIPTIONAL REPRESSOR similar
NCB1_yeast; n=1; Encephalitozoon cuniculi|Rep: CLASS 2
TRANSCRIPTIONAL REPRESSOR similar NCB1_yeast -
Encephalitozoon cuniculi
Length = 95
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = -3
Query: 522 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 343
+FP+ R+ R+++ ++GA PV + +E E++ L AR +R+ +
Sbjct: 13 RFPISRLKRIMQLNEDIGKIGASVPVVASKAIEMFLTEIVGLTLKEARKKSSSRMSSEFI 72
Query: 342 QLAIRND 322
A +D
Sbjct: 73 IRATESD 79
>UniRef50_UPI000023F56A Cluster: hypothetical protein FG05498.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG05498.1 - Gibberella zeae PH-1
Length = 330
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/69 (20%), Positives = 32/69 (46%)
Frame = -3
Query: 522 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 343
+FP RI R+++ +V P+ + +E +++ + + A+D R+ L
Sbjct: 214 KFPTARIKRIMQADEEVGKVAQQTPIAVGKALELFMIQLVTKSADVAKDKGSKRVTASML 273
Query: 342 QLAIRNDEE 316
+ + DE+
Sbjct: 274 KQVVETDEQ 282
>UniRef50_Q7KTV4 Cluster: CG33291-PA; n=5; Diptera|Rep: CG33291-PA -
Drosophila melanogaster (Fruit fly)
Length = 1326
Score = 33.9 bits (74), Expect = 3.9
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEV-LELAGNAA 382
RAGLQ VGR +R + + + + A VYL A +E L E+ L+ G A
Sbjct: 458 RAGLQLSVGRFYRWMTDARLGKFIHEYAAVYLCAGIENLLEEIALQCNGTTA 509
>UniRef50_Q4REE9 Cluster: Chromosome 10 SCAF15123, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
SCAF15123, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1448
Score = 33.5 bits (73), Expect = 5.1
Identities = 14/45 (31%), Positives = 31/45 (68%)
Frame = -3
Query: 447 VYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEEL 313
+Y+ AV+EY++A++L+LAGN + + I + +++++ D+ L
Sbjct: 161 LYIVAVLEYISADILKLAGNYVGNIRHYEISQQDIKVSMCADKVL 205
>UniRef50_UPI0000D5778C Cluster: PREDICTED: similar to CG10318-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG10318-PA, isoform A - Tribolium castaneum
Length = 241
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/73 (19%), Positives = 32/73 (43%)
Frame = -3
Query: 522 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 343
+FP GRI ++++ +V PV ++ +E +L + + + P H+
Sbjct: 11 RFPAGRIKKIMQTDEEVGKVAQAVPVIISRTLELFVESLLTKSMQITQSRNAKTLTPSHM 70
Query: 342 QLAIRNDEELNKL 304
+ I ++ + L
Sbjct: 71 KQCILSESRFDFL 83
>UniRef50_Q20237 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 331
Score = 33.1 bits (72), Expect = 6.7
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = -3
Query: 507 RIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIR 328
RI +++++ R+ PV + ME+ A + L+ A A + + P+H++ A+
Sbjct: 70 RIKKVMQSDEDIGRMVQSVPVSIGRAMEHFAEKFLQAAAEATQFTSSKTLNPQHMKQAVL 129
Query: 327 NDEELNKLLS 298
N + L S
Sbjct: 130 NTPHFSFLES 139
>UniRef50_UPI00006CA409 Cluster: hypothetical protein
TTHERM_00526960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00526960 - Tetrahymena
thermophila SB210
Length = 1433
Score = 32.7 bits (71), Expect = 8.9
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +1
Query: 337 ELKMSRNNSSLLVVSCCVTGQFQNFSGQVFHDGGQVNRCTGTNAFS--VISV-AQQSVYT 507
E+K+ RN S+ + + F N+SG D Q++ + + +FS + + +QQS Y
Sbjct: 733 EIKICRNQSNNFAIVANQSSPFYNYSGDEIKD-DQLSSVSNSMSFSPQINPIQSQQSKYV 791
Query: 508 TDRKLKTGTVRTGLDLALN-FSAFSAT 585
+T GLD +N F+ + T
Sbjct: 792 QSCNFQTDLFNNGLDNEINIFTTYEYT 818
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,927,192
Number of Sequences: 1657284
Number of extensions: 9347227
Number of successful extensions: 28911
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 27851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28864
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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