Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k02r
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0562 - 9469263-9469517,9469619-9469843 176 2e-44
12_02_0151 - 14468480-14468698,14468902-14469090 172 2e-43
07_03_0790 + 21536389-21536577,21536854-21537072 172 2e-43
05_05_0119 - 22512228-22512500,22512577-22512795 172 3e-43
03_05_0949 + 29089293-29089487,29089592-29089810 171 3e-43
07_03_0791 + 21539069-21539257,21539493-21539711 171 5e-43
12_02_0605 - 20924385-20924606,20924705-20924899 169 2e-42
05_01_0107 + 706936-707202,707231-707485 159 1e-39
03_01_0433 + 3353255-3353374,3353532-3353828 124 9e-29
10_08_0018 + 14164103-14164225,14164596-14164892 122 3e-28
08_02_0735 + 20564451-20564525,20566346-20566561 103 1e-22
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 102 2e-22
02_05_0703 - 31056806-31056817,31058329-31058531,31058638-31058908 29 2.7
09_04_0535 + 18397051-18397644 29 3.5
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 29 4.7
03_02_0380 - 7945959-7946699 28 6.2
03_05_0375 + 23594977-23595045,23595471-23595926 28 8.2
02_05_1244 - 35218220-35218704,35219209-35219290 28 8.2
>03_02_0562 - 9469263-9469517,9469619-9469843
Length = 159
Score = 176 bits (428), Expect = 2e-44
Identities = 85/105 (80%), Positives = 93/105 (88%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
+AGLQFPVGRI R L+ G YA+R+G GAPVYLAAV+EYLAAEVLELAGNAARDNKK RII
Sbjct: 34 KAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRII 93
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 220
PRH+ LAIRNDEEL KLL+GVTIA GGVLPNI VLLPKKT +KA
Sbjct: 94 PRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKA 138
>12_02_0151 - 14468480-14468698,14468902-14469090
Length = 135
Score = 172 bits (419), Expect = 2e-43
Identities = 82/101 (81%), Positives = 90/101 (89%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
++AGLQFPVGRI R L+ G YAERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 235
+PRH+QLA+RNDEEL KLL G TIA GGV+PNI LLPKK
Sbjct: 81 VPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKK 121
>07_03_0790 + 21536389-21536577,21536854-21537072
Length = 135
Score = 172 bits (419), Expect = 2e-43
Identities = 82/101 (81%), Positives = 90/101 (89%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
++AGLQFPVGRI R L+ G YAERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 235
+PRH+QLA+RNDEEL KLL G TIA GGV+PNI LLPKK
Sbjct: 81 VPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKK 121
>05_05_0119 - 22512228-22512500,22512577-22512795
Length = 163
Score = 172 bits (418), Expect = 3e-43
Identities = 84/107 (78%), Positives = 92/107 (85%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
+AGLQFPVGRI R L+ G Y++R+G GAPVYLAAV+EYLAAEVLELAGNAARDNKK RII
Sbjct: 32 KAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRII 91
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA*K 214
PRH+ LAIRNDEEL KLL+GVTIA GGVLPNI VLLPKKT A K
Sbjct: 92 PRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTGSAAAK 138
>03_05_0949 + 29089293-29089487,29089592-29089810
Length = 137
Score = 171 bits (417), Expect = 3e-43
Identities = 82/101 (81%), Positives = 92/101 (91%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
++AGLQFPVGRI R L+ G YAERVGAGAPVYL+AV+EYLAAEVLELAGNAARDNKK RI
Sbjct: 23 SKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRI 82
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 235
+PRH+QLA+RNDEEL++LL VTIA GGVLPNIQ VLLPKK
Sbjct: 83 VPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKK 123
>07_03_0791 + 21539069-21539257,21539493-21539711
Length = 135
Score = 171 bits (416), Expect = 5e-43
Identities = 81/101 (80%), Positives = 92/101 (91%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
++AGLQFPVGRI R L+ G YAERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 235
+PRH+QLA+RNDEEL++LL VTIA GGV+PNI +LLPKK
Sbjct: 81 VPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKK 121
>12_02_0605 - 20924385-20924606,20924705-20924899
Length = 138
Score = 169 bits (411), Expect = 2e-42
Identities = 81/104 (77%), Positives = 91/104 (87%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
++AGLQFPVGRI R L+ G YAERVGAGAPVYL+AV+EYLAAEVLELAGNAARDNKK RI
Sbjct: 23 SKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRI 82
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
+PRH+QLA+RNDEEL++LL VTIA GGVLPNI LLPKK K
Sbjct: 83 VPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGGK 126
>05_01_0107 + 706936-707202,707231-707485
Length = 173
Score = 159 bits (387), Expect = 1e-39
Identities = 87/124 (70%), Positives = 94/124 (75%), Gaps = 17/124 (13%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAE-----------------V 406
+AGLQFPVGRI R L+ G YA+RVG GAPVYLAAV+EYLAAE V
Sbjct: 31 KAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEASHCLSLPLPNPSKPSMV 90
Query: 405 LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
LELAGNAARDNKK RIIPRH+ LAIRNDEEL KLL+GVTIA GGVLPNI VLLPKKT +
Sbjct: 91 LELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAE 150
Query: 225 KA*K 214
KA K
Sbjct: 151 KADK 154
>03_01_0433 + 3353255-3353374,3353532-3353828
Length = 138
Score = 124 bits (298), Expect = 9e-29
Identities = 66/105 (62%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 361
+RAGLQFPVGRIHR L++ A RVGA A VY AA++EYL AEVLELAGNA++D K R
Sbjct: 35 SRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKR 94
Query: 360 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
I PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K +++
Sbjct: 95 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTSKE 138
>10_08_0018 + 14164103-14164225,14164596-14164892
Length = 139
Score = 122 bits (294), Expect = 3e-28
Identities = 65/105 (61%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 361
+RAG+QFPVGRIHR L+ A RVGA A VY AA++EYL AEVLELAGNA++D K R
Sbjct: 36 SRAGIQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKR 95
Query: 360 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
I PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K ++
Sbjct: 96 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTAKE 139
>08_02_0735 + 20564451-20564525,20566346-20566561
Length = 96
Score = 103 bits (248), Expect = 1e-22
Identities = 48/67 (71%), Positives = 57/67 (85%)
Frame = -3
Query: 420 LAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLP 241
L+ +VLELAGNAARDNKKTRI+PRH+QLA+RNDEEL++LL VTIA GGV+PNI +LLP
Sbjct: 22 LSIKVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLP 81
Query: 240 KKTEKKA 220
KK A
Sbjct: 82 KKAGSSA 88
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 102 bits (245), Expect = 2e-22
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = -3
Query: 519 FPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 343
FPVGRIHR L+ A RVGA A VY AA++EYL AEVLELAGNA++D K RI PRHL
Sbjct: 65 FPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 124
Query: 342 QLAIRNDEELNKLLSGVTIAQGGVL 268
QLAIR DEEL+ L+ G TIA GGV+
Sbjct: 125 QLAIRGDEELDTLIKG-TIA-GGVV 147
>02_05_0703 - 31056806-31056817,31058329-31058531,31058638-31058908
Length = 161
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -3
Query: 525 LQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
+Q P GR+ RL + + AE + A Y+A V +A E + G A R + TR+
Sbjct: 14 IQHPGGRVERLCWSTSAAEVMRANPGHYIALVTLRVAEERQDGDGGARRTVRLTRV 69
>09_04_0535 + 18397051-18397644
Length = 197
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = -3
Query: 516 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 337
P+ RI ++++ + A APV A E E+ A +NK+ + +
Sbjct: 83 PLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAA 142
Query: 336 AIRNDEELNKLL 301
AI E + L+
Sbjct: 143 AIARTEVFDFLV 154
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Frame = +1
Query: 358 NSSLLVVSCCVTGQFQNFSGQVFHDGG-----QVNRCTGTNA---FSVISVAQQSVYTTD 513
N L+ VSCC TGQ S + GG ++C GT+A V Q +TD
Sbjct: 199 NVPLVSVSCCSTGQTSGVSSCMQPSGGCSISLTCDQCPGTSATDSTGATCVQQAEKVSTD 258
Query: 514 RKLKTGTVRTGLDLALNFSAFSATGHV*SLKK 609
+ A+NF + +G + S +
Sbjct: 259 SDQVAKAAMMTAEGAMNFMRSTISGDLGSFPR 290
>03_02_0380 - 7945959-7946699
Length = 246
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = -3
Query: 522 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 343
Q P+ RI ++++ + A APV A E E+ + A +NK+ + +
Sbjct: 69 QLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQRNDV 128
Query: 342 QLAIRNDEELNKLL 301
AI + + L+
Sbjct: 129 AAAIARTDVFDFLV 142
>03_05_0375 + 23594977-23595045,23595471-23595926
Length = 174
Score = 27.9 bits (59), Expect = 8.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 434 PSWNTWPLKFWNWP 393
PS ++W + FWNWP
Sbjct: 11 PSSHSWHVGFWNWP 24
>02_05_1244 - 35218220-35218704,35219209-35219290
Length = 188
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 316 FLVVPYGELKMSRNNSSLLVVSC--CVTGQFQNFSGQVFHDGGQVNRCTGTNAFSVIS 483
F V LK+S + ++ +C C T + S + + G V RC G N F +I+
Sbjct: 79 FKVRDTSNLKISPRHDLAMIFTCKVCETRSMKMASKESYEKGVVVARCGGCNNFHLIA 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,090,581
Number of Sequences: 37544
Number of extensions: 253773
Number of successful extensions: 804
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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