Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k02r
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59870.1 68418.m07507 histone H2A, putative similar to histon... 175 2e-44
At1g51060.1 68414.m05740 histone H2A, putative similar to histon... 175 2e-44
At3g20670.1 68416.m02616 histone H2A, putative strong similarity... 175 3e-44
At1g08880.1 68414.m00988 histone H2A, putative Strong similarity... 173 9e-44
At5g54640.1 68418.m06803 histone H2A identical to histone H2A Ar... 173 1e-43
At4g27230.1 68417.m03910 histone H2A, putative strong similarity... 173 1e-43
At1g54690.1 68414.m06235 histone H2A, putative strong similarity... 172 2e-43
At5g02560.1 68418.m00190 histone H2A, putative similar to histon... 171 5e-43
At5g27670.1 68418.m03317 histone H2A, putative similar to histon... 163 8e-41
At1g52740.1 68414.m05962 histone H2A, putative similar to histon... 126 1e-29
At3g54560.1 68416.m06037 histone H2A.F/Z identical to GI:2407800 122 2e-28
At2g38810.3 68415.m04767 histone H2A, putative strong similarity... 122 3e-28
At2g38810.2 68415.m04766 histone H2A, putative strong similarity... 122 3e-28
At2g38810.1 68415.m04765 histone H2A, putative strong similarity... 122 3e-28
At4g13570.1 68417.m02114 histone H2A, putative similar to histon... 88 5e-18
At1g07980.1 68414.m00869 histone-like transcription factor (CBF/... 37 0.011
At4g27240.1 68417.m03911 zinc finger (C2H2 type) family protein ... 32 0.42
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 29 3.0
At5g54630.1 68418.m06802 zinc finger protein-related contains Pr... 29 3.9
At5g63470.1 68418.m07968 CCAAT-box binding transcription factor ... 28 5.2
At3g48590.1 68416.m05305 CCAAT-box binding transcription factor ... 28 5.2
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr... 28 5.2
At1g54830.3 68414.m06253 CCAAT-box binding transcription factor ... 28 5.2
At1g54830.2 68414.m06252 CCAAT-box binding transcription factor ... 28 5.2
At1g54830.1 68414.m06251 CCAAT-box binding transcription factor ... 28 5.2
At1g08970.4 68414.m01000 CCAAT-box binding transcription factor ... 28 5.2
At1g08970.3 68414.m00999 CCAAT-box binding transcription factor ... 28 5.2
At1g08970.2 68414.m00998 CCAAT-box binding transcription factor ... 28 5.2
At1g08970.1 68414.m00997 CCAAT-box binding transcription factor ... 28 5.2
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 27 9.0
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 27 9.0
At3g47810.3 68416.m05210 calcineurin-like phosphoesterase family... 27 9.0
At3g47810.2 68416.m05208 calcineurin-like phosphoesterase family... 27 9.0
At3g47810.1 68416.m05209 calcineurin-like phosphoesterase family... 27 9.0
At2g20950.4 68415.m02474 expressed protein 27 9.0
At2g20950.3 68415.m02473 expressed protein 27 9.0
At2g20950.2 68415.m02472 expressed protein 27 9.0
At2g20950.1 68415.m02471 expressed protein 27 9.0
At1g50110.1 68414.m05620 branched-chain amino acid aminotransfer... 27 9.0
>At5g59870.1 68418.m07507 histone H2A, putative similar to histone
H2A Petroselinum crispum SP|P19177, Lycopersicon
esculentum SP|P25469, Zea mays SP|P40280; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 150
Score = 175 bits (427), Expect = 2e-44
Identities = 86/113 (76%), Positives = 97/113 (85%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
+AGLQFPVGRI R L+ G YA+R+G GAPVY+AAV+EYLAAEVLELAGNAARDNKK+RII
Sbjct: 30 KAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRII 89
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA*KTLQTRS 196
PRHL LAIRNDEEL KLLSGVTIA GGVLPNI +VLLPKK+ K + T+S
Sbjct: 90 PRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSATKPAEEKATKS 142
>At1g51060.1 68414.m05740 histone H2A, putative similar to histone
H2A GI:7595337 from Arabidopsis thaliana, Triticum
aestivum GI:536892, Picea abies SP|P35063; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 132
Score = 175 bits (427), Expect = 2e-44
Identities = 83/102 (81%), Positives = 93/102 (91%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
++AGLQFPVGRI R L+ G YAERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 232
+PRH+QLA+RNDEEL+KLL VTIA GGV+PNI +LLPKKT
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122
>At3g20670.1 68416.m02616 histone H2A, putative strong similarity to
histone H2A GB:AAF64418 GI:7595337 from Arabidopsis
thaliana, Triticum aestivum GI:536892; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 132
Score = 175 bits (425), Expect = 3e-44
Identities = 82/101 (81%), Positives = 93/101 (92%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
++AGLQFPVGRI R L+NG YA RVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 235
+PRH+QLA+RNDEEL+KLL VTIA GGV+PNI ++LLPKK
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKK 121
>At1g08880.1 68414.m00988 histone H2A, putative Strong similarity to
histone H2A Cicer arietinum SP|O65759, Picea abies
SP|P35063; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4; ESTs gb|ATTS3874,gb|T46627,gb|T14194 come
from this gene
Length = 142
Score = 173 bits (421), Expect = 9e-44
Identities = 82/104 (78%), Positives = 92/104 (88%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
++AGLQFPVGRI R L++G YAERVGAGAPVYL+AV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 27 SKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRI 86
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLP K K
Sbjct: 87 VPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGK 130
>At5g54640.1 68418.m06803 histone H2A identical to histone H2A
Arabidopsis thaliana GI:7595337
Length = 130
Score = 173 bits (420), Expect = 1e-43
Identities = 82/101 (81%), Positives = 92/101 (91%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
++AGLQFPVGRI R L+ G YAERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 235
+PRH+QLA+RNDEEL+KLL VTIA GGV+PNI +LLPKK
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121
>At4g27230.1 68417.m03910 histone H2A, putative strong similarity to
histone H2A Arabidopsis thaliana GI:7595337, Triticum
aestivum GI:536892, Picea abies SP|P35063; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 173 bits (420), Expect = 1e-43
Identities = 82/101 (81%), Positives = 92/101 (91%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
++AGLQFPVGRI R L+ G YAERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 235
+PRH+QLA+RNDEEL+KLL VTIA GGV+PNI +LLPKK
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121
>At1g54690.1 68414.m06235 histone H2A, putative strong similarity to
histone H2A GI:3204129 SP|O65759 from Cicer arietinum,
Picea abies SP|P35063; contains Pfam profile PF00125
Core histone H2A/H2B/H3/H4
Length = 142
Score = 172 bits (418), Expect = 2e-43
Identities = 82/104 (78%), Positives = 91/104 (87%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
++AGLQFPVGRI R L+ G YAERVGAGAPVYL+AV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 27 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRI 86
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLP K K
Sbjct: 87 VPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGK 130
>At5g02560.1 68418.m00190 histone H2A, putative similar to histone
H2A from Pisum sativum SP|P25470, Zea mays SP|P40280,
Petroselinum crispum SP|P19177; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 153
Score = 171 bits (415), Expect = 5e-43
Identities = 83/113 (73%), Positives = 94/113 (83%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
++GLQFPVGRI R L+ G Y++RVG GAPVYLAAV+EYLAAEVLELAGNAARDNKK RII
Sbjct: 30 KSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRII 89
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA*KTLQTRS 196
PRH+ LA+RNDEEL LL GVTIA GGVLPNI +LLPKK+EK A T +S
Sbjct: 90 PRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKS 142
>At5g27670.1 68418.m03317 histone H2A, putative similar to histone
H2A Lycopersicon esculentum SP|P25469, Pisum sativum
SP|P25470, Petroselinum crispum SP|P19177; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 150
Score = 163 bits (397), Expect = 8e-41
Identities = 81/101 (80%), Positives = 87/101 (86%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 355
+AGLQFPVGRI R L+ G YA R G+GAPVYLAAV+EYLAAEVLELAGNAARDNKK RI
Sbjct: 31 KAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIN 90
Query: 354 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 232
PRHL LAIRNDEEL +LL GVTIA GGVLPNI VLLPKK+
Sbjct: 91 PRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKS 131
>At1g52740.1 68414.m05962 histone H2A, putative similar to histone
H2A.F/Z Arabidopsis thaliana GI:2407800; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 134
Score = 126 bits (305), Expect = 1e-29
Identities = 66/105 (62%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 361
+RAGLQFPVGR+HRLL+ + A RVGA A VY AA++EYL AEVLELAGNA++D K R
Sbjct: 31 SRAGLQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKR 90
Query: 360 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
I PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K ++
Sbjct: 91 ISPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSAKE 134
>At3g54560.1 68416.m06037 histone H2A.F/Z identical to GI:2407800
Length = 136
Score = 122 bits (295), Expect = 2e-28
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = -3
Query: 534 RAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 358
RAG+QFPVGRIHR L+ A RVGA A VY A+++EYL AEVLELAGNA++D K RI
Sbjct: 34 RAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRI 93
Query: 357 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 226
PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T++
Sbjct: 94 TPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTKE 136
>At2g38810.3 68415.m04767 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 122 bits (293), Expect = 3e-28
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 361
+RAG+QFPVGRIHR L+ A RVGA A VY A+++EYL AEVLELAGNA++D K R
Sbjct: 33 SRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKR 92
Query: 360 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 229
I PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T+
Sbjct: 93 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNKVTK 135
>At2g38810.2 68415.m04766 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 122 bits (293), Expect = 3e-28
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 361
+RAG+QFPVGRIHR L+ A RVGA A VY A+++EYL AEVLELAGNA++D K R
Sbjct: 33 SRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKR 92
Query: 360 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 229
I PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T+
Sbjct: 93 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNKVTK 135
>At2g38810.1 68415.m04765 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 122 bits (293), Expect = 3e-28
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = -3
Query: 537 NRAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 361
+RAG+QFPVGRIHR L+ A RVGA A VY A+++EYL AEVLELAGNA++D K R
Sbjct: 33 SRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKR 92
Query: 360 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 229
I PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T+
Sbjct: 93 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNKVTK 135
>At4g13570.1 68417.m02114 histone H2A, putative similar to histone
H2A.F/Z from Arabidopsis thaliana GI:2407800, histone
H2A.F/Z Strongylocentrotus purpuratus SP|P08991, histone
H2A variant Drosophila melanogaster SP|P08985; contains
Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 118
Score = 88.2 bits (209), Expect = 5e-18
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Frame = -3
Query: 528 GLQFPVGRIHRLLRNGNYAER-VGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIP 352
G F V RIH+ L+N A VGA VY+ +++EYL EVL+LA N ++D K RI P
Sbjct: 28 GEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITP 87
Query: 351 RHLQLAIRNDEELNKLLSGVTIAQGGVLPNI 259
RHLQLAIR DEEL+ L+ G TI G V+P+I
Sbjct: 88 RHLQLAIRGDEELDTLIKG-TIIGGSVIPHI 117
>At1g07980.1 68414.m00869 histone-like transcription factor
(CBF/NF-Y) family protein contains Pfam profile PF00808:
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to Chromatin accessibility
complex protein 1 (CHRAC-1) (CHRAC-15) (HuCHRAC15) (DNA
polymerase epsilon subunit p15) (SP:Q9NRG0) {Homo
sapiens}
Length = 206
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = -3
Query: 531 AGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIP 352
A ++FP+ RI R++R+ N A ++ A + E E A +++ +KK I
Sbjct: 106 AKIKFPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSVKDKKKFIHY 165
Query: 351 RHLQLAIRNDEELNKLLSGV 292
+HL + ND+ L V
Sbjct: 166 KHLSSVVSNDQRYEFLADSV 185
>At4g27240.1 68417.m03911 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 431
Score = 31.9 bits (69), Expect = 0.42
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = -3
Query: 498 RLLRNGNYAER-VGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKT---RIIPRHLQLAI 331
R++RNG A+R + G V+ A+ E A E + + D K R+I + +
Sbjct: 326 RIIRNGFSAKREMNNGIGVFTASTSER-AFESIVIGDGGGGDRKALIVCRVIAGRVHRPV 384
Query: 330 RNDEELNKLLSGVTIAQG--GVLPNIQAVLL 244
N EE+ LLSG G G+ N++ + L
Sbjct: 385 ENVEEMGGLLSGFDSLAGKVGLYTNVEELYL 415
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -3
Query: 516 PVGRIHRLLRNGNYAERVGAGAPVY-LAAVMEYLAAEVLELAGNAARDNKKTRII 355
P+GR+H L N +Y + +G +P+ +++V ++ +E + DNK + ++
Sbjct: 394 PLGRLHALRANDSYNDDMGVFSPIIDVSSVEKWADSEGYNNKDHLVVDNKPSSLL 448
>At5g54630.1 68418.m06802 zinc finger protein-related contains
Prosite:PS00028 Zinc finger, C2H2 type, domain
Length = 472
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Frame = -3
Query: 498 RLLRNGNYAERV-GAGAPVYLAAVMEYLAAEVLELAGNAARDNKKT--------RIIPRH 346
R++RNG ++R G V+ A+ +L G+ + D +T R+I
Sbjct: 361 RIIRNGFSSKREKNNGVGVFTASTSGRAFESILVNGGDESGDVDRTVRKVLIVCRVIAGR 420
Query: 345 LQLAIRNDEELNKLLSGVTIAQG--GVLPNIQAVLL 244
+ + N EE+N L+SG G G+ N++ + L
Sbjct: 421 VHRPVENVEEMNGLMSGFDSLAGKVGLYTNVEELYL 456
>At5g63470.1 68418.m07968 CCAAT-box binding transcription factor
Hap5a, putative
Length = 250
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = -3
Query: 522 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 343
Q P+ RI ++++ + A AP+ A E E+ + A +NK+ + +
Sbjct: 78 QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 137
Query: 342 QLAI 331
AI
Sbjct: 138 AAAI 141
>At3g48590.1 68416.m05305 CCAAT-box binding transcription factor
Hap5a, putative
Length = 234
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = -3
Query: 522 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 343
Q P+ RI ++++ + A AP+ A E E+ + A +NK+ + +
Sbjct: 65 QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 124
Query: 342 QLAI 331
AI
Sbjct: 125 AAAI 128
>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
profile: ATPase family PF00004
Length = 440
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = -3
Query: 462 GAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIA 283
GAG +AA+ +YL +V + D R+I R +I E+++ L G +A
Sbjct: 209 GAGKTSLVAAIAKYLNFDVYNITQGVKTDFDTRRLIRRVEDSSILLVEDIDTSLEGSKVA 268
Query: 282 QGGVLPNI 259
+L ++
Sbjct: 269 LSQLLSSL 276
>At1g54830.3 68414.m06253 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -3
Query: 516 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 337
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 72 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 131
Query: 336 AI 331
A+
Sbjct: 132 AV 133
>At1g54830.2 68414.m06252 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -3
Query: 516 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 337
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 72 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 131
Query: 336 AI 331
A+
Sbjct: 132 AV 133
>At1g54830.1 68414.m06251 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -3
Query: 516 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 337
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 72 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 131
Query: 336 AI 331
A+
Sbjct: 132 AV 133
>At1g08970.4 68414.m01000 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -3
Query: 516 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 337
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 82 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 141
Query: 336 AI 331
A+
Sbjct: 142 AV 143
>At1g08970.3 68414.m00999 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -3
Query: 516 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 337
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 82 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 141
Query: 336 AI 331
A+
Sbjct: 142 AV 143
>At1g08970.2 68414.m00998 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -3
Query: 516 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 337
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 82 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 141
Query: 336 AI 331
A+
Sbjct: 142 AV 143
>At1g08970.1 68414.m00997 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -3
Query: 516 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 337
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 82 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 141
Query: 336 AI 331
A+
Sbjct: 142 AV 143
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 346 SSTRHKERRGTEQTPFRCDNRSRRSFTKHSSGTTPEEDREES 221
S+TRHK RRG ++ R + R K S+ ++ + + S
Sbjct: 268 STTRHKGRRGERKSKGRSGKKKARPDRKPSTNSSSDTESSSS 309
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 346 SSTRHKERRGTEQTPFRCDNRSRRSFTKHSSGTTPEEDREES 221
S+TRHK RRG ++ R + R K S+ ++ + + S
Sbjct: 268 STTRHKGRRGERKSKGRSGKKKARPDRKPSTNSSSDTESSSS 309
>At3g47810.3 68416.m05210 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 190
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 322 VVPYGELKMSRNNSSLLVVSCCVTGQFQNFSGQVFHDGGQVNRCTGTNAFSVIS 483
V+P+G+L L V VTG F+ G +N + T A+S I+
Sbjct: 91 VIPWGDLDSLAMLQRQLGVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSIN 144
>At3g47810.2 68416.m05208 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 180
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 322 VVPYGELKMSRNNSSLLVVSCCVTGQFQNFSGQVFHDGGQVNRCTGTNAFSVIS 483
V+P+G+L L V VTG F+ G +N + T A+S I+
Sbjct: 81 VIPWGDLDSLAMLQRQLGVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSIN 134
>At3g47810.1 68416.m05209 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 190
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 322 VVPYGELKMSRNNSSLLVVSCCVTGQFQNFSGQVFHDGGQVNRCTGTNAFSVIS 483
V+P+G+L L V VTG F+ G +N + T A+S I+
Sbjct: 91 VIPWGDLDSLAMLQRQLGVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSIN 144
>At2g20950.4 68415.m02474 expressed protein
Length = 530
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 429 MEYLAAEVLELAGNAARDNKKTRI 358
+E LAA V+EL A RD KTR+
Sbjct: 389 LESLAAAVMELKSTALRDLTKTRV 412
>At2g20950.3 68415.m02473 expressed protein
Length = 505
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 429 MEYLAAEVLELAGNAARDNKKTRI 358
+E LAA V+EL A RD KTR+
Sbjct: 364 LESLAAAVMELKSTALRDLTKTRV 387
>At2g20950.2 68415.m02472 expressed protein
Length = 503
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 429 MEYLAAEVLELAGNAARDNKKTRI 358
+E LAA V+EL A RD KTR+
Sbjct: 362 LESLAAAVMELKSTALRDLTKTRV 385
>At2g20950.1 68415.m02471 expressed protein
Length = 520
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 429 MEYLAAEVLELAGNAARDNKKTRI 358
+E LAA V+EL A RD KTR+
Sbjct: 379 LESLAAAVMELKSTALRDLTKTRV 402
>At1g50110.1 68414.m05620 branched-chain amino acid aminotransferase
6 / branched-chain amino acid transaminase 6 (BCAT6)
contains Pfam profile: PF01063 aminotransferase class
IV; identical to SP|Q9LPM9 Branched-chain amino acid
aminotransferase 6 (EC 2.6.1.42) (Atbcat-6) {Arabidopsis
thaliana}
Length = 356
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 280 LSDCHTGKEFVQFLVVPYGELKMS 351
++ C G+ F Q +VPYG++ +S
Sbjct: 38 VAKCRQGESFTQGKIVPYGDISIS 61
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,504,430
Number of Sequences: 28952
Number of extensions: 205221
Number of successful extensions: 706
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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