Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12k02f
(583 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59870.1 68418.m07507 histone H2A, putative similar to histon... 175 1e-44
At1g51060.1 68414.m05740 histone H2A, putative similar to histon... 175 1e-44
At3g20670.1 68416.m02616 histone H2A, putative strong similarity... 175 2e-44
At1g08880.1 68414.m00988 histone H2A, putative Strong similarity... 173 7e-44
At5g54640.1 68418.m06803 histone H2A identical to histone H2A Ar... 173 9e-44
At4g27230.1 68417.m03910 histone H2A, putative strong similarity... 173 9e-44
At1g54690.1 68414.m06235 histone H2A, putative strong similarity... 172 2e-43
At5g02560.1 68418.m00190 histone H2A, putative similar to histon... 171 4e-43
At5g27670.1 68418.m03317 histone H2A, putative similar to histon... 163 6e-41
At1g52740.1 68414.m05962 histone H2A, putative similar to histon... 126 8e-30
At3g54560.1 68416.m06037 histone H2A.F/Z identical to GI:2407800 122 1e-28
At2g38810.3 68415.m04767 histone H2A, putative strong similarity... 122 2e-28
At2g38810.2 68415.m04766 histone H2A, putative strong similarity... 122 2e-28
At2g38810.1 68415.m04765 histone H2A, putative strong similarity... 122 2e-28
At4g13570.1 68417.m02114 histone H2A, putative similar to histon... 88 3e-18
At1g07980.1 68414.m00869 histone-like transcription factor (CBF/... 37 0.009
At4g27240.1 68417.m03911 zinc finger (C2H2 type) family protein ... 32 0.32
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 29 2.3
At5g54630.1 68418.m06802 zinc finger protein-related contains Pr... 29 3.0
At5g63470.1 68418.m07968 CCAAT-box binding transcription factor ... 28 4.0
At3g48590.1 68416.m05305 CCAAT-box binding transcription factor ... 28 4.0
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr... 28 4.0
At1g54830.3 68414.m06253 CCAAT-box binding transcription factor ... 28 4.0
At1g54830.2 68414.m06252 CCAAT-box binding transcription factor ... 28 4.0
At1g54830.1 68414.m06251 CCAAT-box binding transcription factor ... 28 4.0
At1g08970.4 68414.m01000 CCAAT-box binding transcription factor ... 28 4.0
At1g08970.3 68414.m00999 CCAAT-box binding transcription factor ... 28 4.0
At1g08970.2 68414.m00998 CCAAT-box binding transcription factor ... 28 4.0
At1g08970.1 68414.m00997 CCAAT-box binding transcription factor ... 28 4.0
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 27 6.9
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 27 6.9
At3g47810.3 68416.m05210 calcineurin-like phosphoesterase family... 27 6.9
At3g47810.2 68416.m05208 calcineurin-like phosphoesterase family... 27 6.9
At3g47810.1 68416.m05209 calcineurin-like phosphoesterase family... 27 6.9
At2g20950.4 68415.m02474 expressed protein 27 6.9
At2g20950.3 68415.m02473 expressed protein 27 6.9
At2g20950.2 68415.m02472 expressed protein 27 6.9
At2g20950.1 68415.m02471 expressed protein 27 6.9
At1g50110.1 68414.m05620 branched-chain amino acid aminotransfer... 27 6.9
At5g50480.1 68418.m06252 CCAAT-box binding transcription factor ... 27 9.1
At4g27010.1 68417.m03885 expressed protein ; expression support... 27 9.1
At4g21370.1 68417.m03088 S-locus protein kinase, putative simila... 27 9.1
At3g59100.1 68416.m06589 glycosyl transferase family 48 protein ... 27 9.1
>At5g59870.1 68418.m07507 histone H2A, putative similar to histone
H2A Petroselinum crispum SP|P19177, Lycopersicon
esculentum SP|P25469, Zea mays SP|P40280; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 150
Score = 175 bits (427), Expect = 1e-44
Identities = 86/113 (76%), Positives = 97/113 (85%)
Frame = +2
Query: 164 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 343
+AGLQFPVGRI R L+ G YA+R+G GAPVY+AAV+EYLAAEVLELAGNAARDNKK+RII
Sbjct: 30 KAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRII 89
Query: 344 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA*KTLQTRS 502
PRHL LAIRNDEEL KLLSGVTIA GGVLPNI +VLLPKK+ K + T+S
Sbjct: 90 PRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSATKPAEEKATKS 142
>At1g51060.1 68414.m05740 histone H2A, putative similar to histone
H2A GI:7595337 from Arabidopsis thaliana, Triticum
aestivum GI:536892, Picea abies SP|P35063; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 132
Score = 175 bits (427), Expect = 1e-44
Identities = 83/102 (81%), Positives = 93/102 (91%)
Frame = +2
Query: 161 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 340
++AGLQFPVGRI R L+ G YAERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 341 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 466
+PRH+QLA+RNDEEL+KLL VTIA GGV+PNI +LLPKKT
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122
>At3g20670.1 68416.m02616 histone H2A, putative strong similarity to
histone H2A GB:AAF64418 GI:7595337 from Arabidopsis
thaliana, Triticum aestivum GI:536892; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 132
Score = 175 bits (425), Expect = 2e-44
Identities = 82/101 (81%), Positives = 93/101 (92%)
Frame = +2
Query: 161 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 340
++AGLQFPVGRI R L+NG YA RVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 341 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 463
+PRH+QLA+RNDEEL+KLL VTIA GGV+PNI ++LLPKK
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKK 121
>At1g08880.1 68414.m00988 histone H2A, putative Strong similarity to
histone H2A Cicer arietinum SP|O65759, Picea abies
SP|P35063; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4; ESTs gb|ATTS3874,gb|T46627,gb|T14194 come
from this gene
Length = 142
Score = 173 bits (421), Expect = 7e-44
Identities = 82/104 (78%), Positives = 92/104 (88%)
Frame = +2
Query: 161 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 340
++AGLQFPVGRI R L++G YAERVGAGAPVYL+AV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 27 SKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRI 86
Query: 341 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 472
+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLP K K
Sbjct: 87 VPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGK 130
>At5g54640.1 68418.m06803 histone H2A identical to histone H2A
Arabidopsis thaliana GI:7595337
Length = 130
Score = 173 bits (420), Expect = 9e-44
Identities = 82/101 (81%), Positives = 92/101 (91%)
Frame = +2
Query: 161 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 340
++AGLQFPVGRI R L+ G YAERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 341 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 463
+PRH+QLA+RNDEEL+KLL VTIA GGV+PNI +LLPKK
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121
>At4g27230.1 68417.m03910 histone H2A, putative strong similarity to
histone H2A Arabidopsis thaliana GI:7595337, Triticum
aestivum GI:536892, Picea abies SP|P35063; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 173 bits (420), Expect = 9e-44
Identities = 82/101 (81%), Positives = 92/101 (91%)
Frame = +2
Query: 161 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 340
++AGLQFPVGRI R L+ G YAERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 341 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 463
+PRH+QLA+RNDEEL+KLL VTIA GGV+PNI +LLPKK
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121
>At1g54690.1 68414.m06235 histone H2A, putative strong similarity to
histone H2A GI:3204129 SP|O65759 from Cicer arietinum,
Picea abies SP|P35063; contains Pfam profile PF00125
Core histone H2A/H2B/H3/H4
Length = 142
Score = 172 bits (418), Expect = 2e-43
Identities = 82/104 (78%), Positives = 91/104 (87%)
Frame = +2
Query: 161 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 340
++AGLQFPVGRI R L+ G YAERVGAGAPVYL+AV+EYLAAEVLELAGNAARDNKKTRI
Sbjct: 27 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRI 86
Query: 341 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 472
+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLP K K
Sbjct: 87 VPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGK 130
>At5g02560.1 68418.m00190 histone H2A, putative similar to histone
H2A from Pisum sativum SP|P25470, Zea mays SP|P40280,
Petroselinum crispum SP|P19177; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 153
Score = 171 bits (415), Expect = 4e-43
Identities = 83/113 (73%), Positives = 94/113 (83%)
Frame = +2
Query: 164 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 343
++GLQFPVGRI R L+ G Y++RVG GAPVYLAAV+EYLAAEVLELAGNAARDNKK RII
Sbjct: 30 KSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRII 89
Query: 344 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA*KTLQTRS 502
PRH+ LA+RNDEEL LL GVTIA GGVLPNI +LLPKK+EK A T +S
Sbjct: 90 PRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKS 142
>At5g27670.1 68418.m03317 histone H2A, putative similar to histone
H2A Lycopersicon esculentum SP|P25469, Pisum sativum
SP|P25470, Petroselinum crispum SP|P19177; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 150
Score = 163 bits (397), Expect = 6e-41
Identities = 81/101 (80%), Positives = 87/101 (86%)
Frame = +2
Query: 164 RAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 343
+AGLQFPVGRI R L+ G YA R G+GAPVYLAAV+EYLAAEVLELAGNAARDNKK RI
Sbjct: 31 KAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIN 90
Query: 344 PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 466
PRHL LAIRNDEEL +LL GVTIA GGVLPNI VLLPKK+
Sbjct: 91 PRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKS 131
>At1g52740.1 68414.m05962 histone H2A, putative similar to histone
H2A.F/Z Arabidopsis thaliana GI:2407800; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 134
Score = 126 bits (305), Expect = 8e-30
Identities = 66/105 (62%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Frame = +2
Query: 161 NRAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 337
+RAGLQFPVGR+HRLL+ + A RVGA A VY AA++EYL AEVLELAGNA++D K R
Sbjct: 31 SRAGLQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKR 90
Query: 338 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 472
I PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K ++
Sbjct: 91 ISPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSAKE 134
>At3g54560.1 68416.m06037 histone H2A.F/Z identical to GI:2407800
Length = 136
Score = 122 bits (295), Expect = 1e-28
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +2
Query: 164 RAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 340
RAG+QFPVGRIHR L+ A RVGA A VY A+++EYL AEVLELAGNA++D K RI
Sbjct: 34 RAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRI 93
Query: 341 IPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 472
PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T++
Sbjct: 94 TPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTKE 136
>At2g38810.3 68415.m04767 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 122 bits (293), Expect = 2e-28
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +2
Query: 161 NRAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 337
+RAG+QFPVGRIHR L+ A RVGA A VY A+++EYL AEVLELAGNA++D K R
Sbjct: 33 SRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKR 92
Query: 338 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 469
I PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T+
Sbjct: 93 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNKVTK 135
>At2g38810.2 68415.m04766 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 122 bits (293), Expect = 2e-28
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +2
Query: 161 NRAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 337
+RAG+QFPVGRIHR L+ A RVGA A VY A+++EYL AEVLELAGNA++D K R
Sbjct: 33 SRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKR 92
Query: 338 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 469
I PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T+
Sbjct: 93 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNKVTK 135
>At2g38810.1 68415.m04765 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 122 bits (293), Expect = 2e-28
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +2
Query: 161 NRAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 337
+RAG+QFPVGRIHR L+ A RVGA A VY A+++EYL AEVLELAGNA++D K R
Sbjct: 33 SRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKR 92
Query: 338 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 469
I PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T+
Sbjct: 93 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNKVTK 135
>At4g13570.1 68417.m02114 histone H2A, putative similar to histone
H2A.F/Z from Arabidopsis thaliana GI:2407800, histone
H2A.F/Z Strongylocentrotus purpuratus SP|P08991, histone
H2A variant Drosophila melanogaster SP|P08985; contains
Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 118
Score = 88.2 bits (209), Expect = 3e-18
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Frame = +2
Query: 170 GLQFPVGRIHRLLRNGNYAER-VGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIP 346
G F V RIH+ L+N A VGA VY+ +++EYL EVL+LA N ++D K RI P
Sbjct: 28 GEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITP 87
Query: 347 RHLQLAIRNDEELNKLLSGVTIAQGGVLPNI 439
RHLQLAIR DEEL+ L+ G TI G V+P+I
Sbjct: 88 RHLQLAIRGDEELDTLIKG-TIIGGSVIPHI 117
>At1g07980.1 68414.m00869 histone-like transcription factor
(CBF/NF-Y) family protein contains Pfam profile PF00808:
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to Chromatin accessibility
complex protein 1 (CHRAC-1) (CHRAC-15) (HuCHRAC15) (DNA
polymerase epsilon subunit p15) (SP:Q9NRG0) {Homo
sapiens}
Length = 206
Score = 37.1 bits (82), Expect = 0.009
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +2
Query: 167 AGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIP 346
A ++FP+ RI R++R+ N A ++ A + E E A +++ +KK I
Sbjct: 106 AKIKFPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSVKDKKKFIHY 165
Query: 347 RHLQLAIRNDEELNKLLSGV 406
+HL + ND+ L V
Sbjct: 166 KHLSSVVSNDQRYEFLADSV 185
>At4g27240.1 68417.m03911 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 431
Score = 31.9 bits (69), Expect = 0.32
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +2
Query: 200 RLLRNGNYAER-VGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKT---RIIPRHLQLAI 367
R++RNG A+R + G V+ A+ E A E + + D K R+I + +
Sbjct: 326 RIIRNGFSAKREMNNGIGVFTASTSER-AFESIVIGDGGGGDRKALIVCRVIAGRVHRPV 384
Query: 368 RNDEELNKLLSGVTIAQG--GVLPNIQAVLL 454
N EE+ LLSG G G+ N++ + L
Sbjct: 385 ENVEEMGGLLSGFDSLAGKVGLYTNVEELYL 415
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 182 PVGRIHRLLRNGNYAERVGAGAPVY-LAAVMEYLAAEVLELAGNAARDNKKTRII 343
P+GR+H L N +Y + +G +P+ +++V ++ +E + DNK + ++
Sbjct: 394 PLGRLHALRANDSYNDDMGVFSPIIDVSSVEKWADSEGYNNKDHLVVDNKPSSLL 448
>At5g54630.1 68418.m06802 zinc finger protein-related contains
Prosite:PS00028 Zinc finger, C2H2 type, domain
Length = 472
Score = 28.7 bits (61), Expect = 3.0
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Frame = +2
Query: 200 RLLRNGNYAERV-GAGAPVYLAAVMEYLAAEVLELAGNAARDNKKT--------RIIPRH 352
R++RNG ++R G V+ A+ +L G+ + D +T R+I
Sbjct: 361 RIIRNGFSSKREKNNGVGVFTASTSGRAFESILVNGGDESGDVDRTVRKVLIVCRVIAGR 420
Query: 353 LQLAIRNDEELNKLLSGVTIAQG--GVLPNIQAVLL 454
+ + N EE+N L+SG G G+ N++ + L
Sbjct: 421 VHRPVENVEEMNGLMSGFDSLAGKVGLYTNVEELYL 456
>At5g63470.1 68418.m07968 CCAAT-box binding transcription factor
Hap5a, putative
Length = 250
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +2
Query: 176 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 355
Q P+ RI ++++ + A AP+ A E E+ + A +NK+ + +
Sbjct: 78 QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 137
Query: 356 QLAI 367
AI
Sbjct: 138 AAAI 141
>At3g48590.1 68416.m05305 CCAAT-box binding transcription factor
Hap5a, putative
Length = 234
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +2
Query: 176 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 355
Q P+ RI ++++ + A AP+ A E E+ + A +NK+ + +
Sbjct: 65 QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 124
Query: 356 QLAI 367
AI
Sbjct: 125 AAAI 128
>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
profile: ATPase family PF00004
Length = 440
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 236 GAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIA 415
GAG +AA+ +YL +V + D R+I R +I E+++ L G +A
Sbjct: 209 GAGKTSLVAAIAKYLNFDVYNITQGVKTDFDTRRLIRRVEDSSILLVEDIDTSLEGSKVA 268
Query: 416 QGGVLPNI 439
+L ++
Sbjct: 269 LSQLLSSL 276
>At1g54830.3 68414.m06253 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +2
Query: 182 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 361
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 72 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 131
Query: 362 AI 367
A+
Sbjct: 132 AV 133
>At1g54830.2 68414.m06252 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +2
Query: 182 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 361
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 72 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 131
Query: 362 AI 367
A+
Sbjct: 132 AV 133
>At1g54830.1 68414.m06251 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +2
Query: 182 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 361
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 72 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 131
Query: 362 AI 367
A+
Sbjct: 132 AV 133
>At1g08970.4 68414.m01000 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +2
Query: 182 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 361
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 82 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 141
Query: 362 AI 367
A+
Sbjct: 142 AV 143
>At1g08970.3 68414.m00999 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +2
Query: 182 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 361
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 82 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 141
Query: 362 AI 367
A+
Sbjct: 142 AV 143
>At1g08970.2 68414.m00998 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +2
Query: 182 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 361
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 82 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 141
Query: 362 AI 367
A+
Sbjct: 142 AV 143
>At1g08970.1 68414.m00997 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +2
Query: 182 PVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQL 361
P+ RI ++++ + A APV A E E+ + N +NK+ + +
Sbjct: 82 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 141
Query: 362 AI 367
A+
Sbjct: 142 AV 143
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 352 SSTRHKERRGTEQTPFRCDNRSRRSFTKHSSGTTPEEDREES 477
S+TRHK RRG ++ R + R K S+ ++ + + S
Sbjct: 268 STTRHKGRRGERKSKGRSGKKKARPDRKPSTNSSSDTESSSS 309
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 352 SSTRHKERRGTEQTPFRCDNRSRRSFTKHSSGTTPEEDREES 477
S+TRHK RRG ++ R + R K S+ ++ + + S
Sbjct: 268 STTRHKGRRGERKSKGRSGKKKARPDRKPSTNSSSDTESSSS 309
>At3g47810.3 68416.m05210 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 190
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 376 VVPYGELKMSRNNSSLLVVSCCVTGQFQNFSGQVFHDGGQVNRCTGTNAFSVIS 215
V+P+G+L L V VTG F+ G +N + T A+S I+
Sbjct: 91 VIPWGDLDSLAMLQRQLGVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSIN 144
>At3g47810.2 68416.m05208 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 180
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 376 VVPYGELKMSRNNSSLLVVSCCVTGQFQNFSGQVFHDGGQVNRCTGTNAFSVIS 215
V+P+G+L L V VTG F+ G +N + T A+S I+
Sbjct: 81 VIPWGDLDSLAMLQRQLGVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSIN 134
>At3g47810.1 68416.m05209 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 190
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 376 VVPYGELKMSRNNSSLLVVSCCVTGQFQNFSGQVFHDGGQVNRCTGTNAFSVIS 215
V+P+G+L L V VTG F+ G +N + T A+S I+
Sbjct: 91 VIPWGDLDSLAMLQRQLGVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSIN 144
>At2g20950.4 68415.m02474 expressed protein
Length = 530
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 269 MEYLAAEVLELAGNAARDNKKTRI 340
+E LAA V+EL A RD KTR+
Sbjct: 389 LESLAAAVMELKSTALRDLTKTRV 412
>At2g20950.3 68415.m02473 expressed protein
Length = 505
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 269 MEYLAAEVLELAGNAARDNKKTRI 340
+E LAA V+EL A RD KTR+
Sbjct: 364 LESLAAAVMELKSTALRDLTKTRV 387
>At2g20950.2 68415.m02472 expressed protein
Length = 503
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 269 MEYLAAEVLELAGNAARDNKKTRI 340
+E LAA V+EL A RD KTR+
Sbjct: 362 LESLAAAVMELKSTALRDLTKTRV 385
>At2g20950.1 68415.m02471 expressed protein
Length = 520
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 269 MEYLAAEVLELAGNAARDNKKTRI 340
+E LAA V+EL A RD KTR+
Sbjct: 379 LESLAAAVMELKSTALRDLTKTRV 402
>At1g50110.1 68414.m05620 branched-chain amino acid aminotransferase
6 / branched-chain amino acid transaminase 6 (BCAT6)
contains Pfam profile: PF01063 aminotransferase class
IV; identical to SP|Q9LPM9 Branched-chain amino acid
aminotransferase 6 (EC 2.6.1.42) (Atbcat-6) {Arabidopsis
thaliana}
Length = 356
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 418 LSDCHTGKEFVQFLVVPYGELKMS 347
++ C G+ F Q +VPYG++ +S
Sbjct: 38 VAKCRQGESFTQGKIVPYGDISIS 61
>At5g50480.1 68418.m06252 CCAAT-box binding transcription factor
Hap5a, putative GI:14577940 CCAAT-binding protein
subunit HAP5 {Hypocrea jecorina} similar to
Transcription factor GB:CAA74053 GI:2398533 from
[Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 202
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/77 (22%), Positives = 33/77 (42%)
Frame = +2
Query: 176 QFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHL 355
Q P+ RI ++++ V A AP+ A E ++ + A +NK+ + +
Sbjct: 54 QLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDI 113
Query: 356 QLAIRNDEELNKLLSGV 406
A+ + + LL V
Sbjct: 114 SNAVASSFTYDFLLDVV 130
>At4g27010.1 68417.m03885 expressed protein ; expression supported by
MPSS
Length = 2535
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 21 LSLCTDVRETRVRSSAFV----CYI-VNFFKLQTCPVAEKAEKLRARSSPVRTVPVFSF 182
+ L DVR+ ++ + V C + V FF Q EK+E P+ VPVFSF
Sbjct: 1886 VDLVEDVRQGLIKENLCVDPKICALTVLFFPYQR--TTEKSENFYLYDDPINEVPVFSF 1942
>At4g21370.1 68417.m03088 S-locus protein kinase, putative similar
to SRKa [Arabidopsis lyrata] gi|13620927|dbj|BAB40986;
contains Pfam domains PF00954: S-locus glycoprotein
family, PF00069: Protein kinase domain and PF01453:
Lectin (probable mannose binding)
Length = 844
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 213 TEITLNALVPVHRFTWPPSWNTWPLKFWNWP 305
+ +T+N + + FTW P+ W + FW P
Sbjct: 264 SRLTINTVGRLEGFTWEPTQQEWNM-FWFMP 293
>At3g59100.1 68416.m06589 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1934
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 266 VMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKL 394
++E+LA+E GN A + ++ + + RNDEE ++L
Sbjct: 247 ILEWLASEFGFQRGNVANQREHIILLLANADIRKRNDEEYDEL 289
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,938,829
Number of Sequences: 28952
Number of extensions: 188456
Number of successful extensions: 696
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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