Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12j24r
(715 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 53 9e-07
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 53 9e-07
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 53 9e-07
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 53 9e-07
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 53 9e-07
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 43 0.001
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 43 0.001
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 43 0.001
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 43 0.001
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 43 0.001
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 43 0.001
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 43 0.001
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 43 0.001
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 43 0.001
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 43 0.001
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 43 0.001
AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens ... 35 0.25
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 33 1.0
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 33 1.0
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 33 1.0
AF229126-5|AAF43197.1| 421|Homo sapiens acetylcholinesterase co... 33 1.0
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 33 1.0
BC063609-1|AAH63609.1| 423|Homo sapiens NFKBIE protein protein. 33 1.3
BC011676-1|AAH11676.2| 423|Homo sapiens NFKBIE protein protein. 33 1.3
AL139392-10|CAI20103.1| 500|Homo sapiens nuclear factor of kapp... 33 1.3
D82344-1|BAA11555.1| 314|Homo sapiens NBPhox protein. 32 1.8
BC017199-1|AAH17199.1| 314|Homo sapiens paired-like homeobox 2b... 32 1.8
AF117979-1|AAD26698.1| 314|Homo sapiens homeodomain transcripti... 32 1.8
AB015671-1|BAA82670.1| 314|Homo sapiens NBPhox protein. 32 1.8
AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domai... 32 2.3
AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domai... 32 2.3
AL353678-2|CAH71515.1| 784|Homo sapiens zinc finger, CCHC domai... 32 2.3
AL353678-1|CAH71514.1| 395|Homo sapiens zinc finger, CCHC domai... 32 2.3
AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domai... 32 2.3
AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domai... 32 2.3
AL137849-2|CAI14919.1| 784|Homo sapiens zinc finger, CCHC domai... 32 2.3
AL137849-1|CAI14918.1| 395|Homo sapiens zinc finger, CCHC domai... 32 2.3
AK023471-1|BAB14584.1| 395|Homo sapiens protein ( Homo sapiens ... 32 2.3
AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein. 32 2.3
M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein. 31 3.1
DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein. 31 3.1
BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein. 31 3.1
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 31 3.1
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 31 3.1
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 31 3.1
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 31 3.1
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 31 3.1
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 31 3.1
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 31 3.1
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 31 3.1
AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domai... 31 3.1
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 31 3.1
AK126408-1|BAC86543.1| 131|Homo sapiens protein ( Homo sapiens ... 31 3.1
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 31 3.1
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 31 3.1
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 31 3.1
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 31 3.1
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 31 3.1
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 31 3.1
AF074086-5|AAD21095.2| 666|Homo sapiens gag protein. 31 3.1
AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein. 31 3.1
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 31 3.1
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 31 3.1
L41887-1|AAA88098.1| 238|Homo sapiens splicing factor, arginine... 31 4.1
L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein. 31 4.1
BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor, argini... 31 4.1
BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein. 31 4.1
BC054506-1|AAH54506.1| 285|Homo sapiens C1QTNF2 protein protein. 31 4.1
BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor, argini... 31 4.1
BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor, argini... 31 4.1
BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor, argini... 31 4.1
BC013906-1|AAH13906.1| 316|Homo sapiens FLJ36031 protein protein. 31 4.1
BC011699-1|AAH11699.1| 285|Homo sapiens C1QTNF2 protein protein. 31 4.1
BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor, argini... 31 4.1
AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protei... 31 4.1
AY358839-1|AAQ89198.1| 285|Homo sapiens CTRP2 protein. 31 4.1
AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich sp... 31 4.1
AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular... 31 4.1
AF329836-1|AAK17960.1| 285|Homo sapiens complement-c1q tumor ne... 31 4.1
AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein. 31 4.1
AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding ... 31 4.1
AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding ... 31 4.1
AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein. 31 5.4
AB033040-1|BAA86528.1| 462|Homo sapiens KIAA1214 protein protein. 31 5.4
Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V) pr... 30 7.2
J04478-1|AAA51859.1| 463|Homo sapiens COL5A2 protein. 30 7.2
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 30 7.2
AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid b... 30 7.2
AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen... 30 7.2
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 30 9.5
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 30 9.5
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 30 9.5
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 30 9.5
AL138761-3|CAI12397.1| 65|Homo sapiens collagen type XVII alph... 30 9.5
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 53.2 bits (122), Expect = 9e-07
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 713 VRQRPGMGDPEQCYRCGRGGHWSKECP 633
+R PGMGD CYRCG+ GHWSKECP
Sbjct: 150 LRTAPGMGDQSGCYRCGKEGHWSKECP 176
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 53.2 bits (122), Expect = 9e-07
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 713 VRQRPGMGDPEQCYRCGRGGHWSKECP 633
+R PGMGD CYRCG+ GHWSKECP
Sbjct: 150 LRTAPGMGDQSGCYRCGKEGHWSKECP 176
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 53.2 bits (122), Expect = 9e-07
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 713 VRQRPGMGDPEQCYRCGRGGHWSKECP 633
+R PGMGD CYRCG+ GHWSKECP
Sbjct: 150 LRTAPGMGDQSGCYRCGKEGHWSKECP 176
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 53.2 bits (122), Expect = 9e-07
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 713 VRQRPGMGDPEQCYRCGRGGHWSKECP 633
+R PGMGD CYRCG+ GHWSKECP
Sbjct: 150 LRTAPGMGDQSGCYRCGKEGHWSKECP 176
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 53.2 bits (122), Expect = 9e-07
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 713 VRQRPGMGDPEQCYRCGRGGHWSKECP 633
+R PGMGD CYRCG+ GHWSKECP
Sbjct: 150 LRTAPGMGDQSGCYRCGKEGHWSKECP 176
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 680 QCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 585
+C++CGR GHW++ECP G R G R R G
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGR-GMRSRGRG 35
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 686 PEQCYRCGRGGHWSKEC 636
P+ CYRCG GH +K+C
Sbjct: 51 PDICYRCGESGHLAKDC 67
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKEC 636
+ CY CGRGGH +K+C
Sbjct: 72 DACYNCGRGGHIAKDC 87
Score = 30.7 bits (66), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPK 630
D ++CY CG GH K+C K
Sbjct: 115 DEQKCYSCGEFGHIQKDCTK 134
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 158 CYRCGESGHLAREC 171
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 680 QCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 585
+C++CGR GHW++ECP G R G R R G
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGR-GMRSRGRG 35
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 686 PEQCYRCGRGGHWSKEC 636
P+ CYRCG GH +K+C
Sbjct: 51 PDICYRCGESGHLAKDC 67
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKEC 636
+ CY CGRGGH +K+C
Sbjct: 72 DACYNCGRGGHIAKDC 87
Score = 30.7 bits (66), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPK 630
D ++CY CG GH K+C K
Sbjct: 115 DEQKCYSCGEFGHIQKDCTK 134
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 158 CYRCGESGHLAREC 171
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 680 QCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 585
+C++CGR GHW++ECP G R G R R G
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGR-GMRSRGRG 35
Score = 35.5 bits (78), Expect = 0.19
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKEC 636
D E CY CGRGGH +K+C
Sbjct: 65 DVEACYNCGRGGHIAKDC 82
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 686 PEQCYRCGRGGHWSKEC 636
P+ CYRCG GH +K+C
Sbjct: 44 PDICYRCGESGHLAKDC 60
Score = 30.7 bits (66), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPK 630
D ++CY CG GH K+C K
Sbjct: 110 DEQKCYSCGEFGHIQKDCTK 129
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 153 CYRCGESGHLAREC 166
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 680 QCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 585
+C++CGR GHW++ECP G R G R R G
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGR-GMRSRGRG 35
Score = 34.3 bits (75), Expect = 0.44
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKEC 636
+ E CY CGRGGH +K+C
Sbjct: 64 EDEACYNCGRGGHIAKDC 81
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 686 PEQCYRCGRGGHWSKEC 636
P+ CYRCG GH +K+C
Sbjct: 44 PDICYRCGESGHLAKDC 60
Score = 30.7 bits (66), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPK 630
D ++CY CG GH K+C K
Sbjct: 109 DEQKCYSCGEFGHIQKDCTK 128
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 152 CYRCGESGHLAREC 165
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 680 QCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 585
+C++CGR GHW++ECP G R G R R G
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGR-GMRSRGRG 35
Score = 34.3 bits (75), Expect = 0.44
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKEC 636
+ E CY CGRGGH +K+C
Sbjct: 71 EDEACYNCGRGGHIAKDC 88
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 686 PEQCYRCGRGGHWSKEC 636
P+ CYRCG GH +K+C
Sbjct: 51 PDICYRCGESGHLAKDC 67
Score = 30.7 bits (66), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPK 630
D ++CY CG GH K+C K
Sbjct: 116 DEQKCYSCGEFGHIQKDCTK 135
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 159 CYRCGESGHLAREC 172
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 680 QCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 585
+C++CGR GHW++ECP G R G R R G
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGR-GMRSRGRG 35
Score = 34.3 bits (75), Expect = 0.44
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKEC 636
+ E CY CGRGGH +K+C
Sbjct: 71 EDEACYNCGRGGHIAKDC 88
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 686 PEQCYRCGRGGHWSKEC 636
P+ CYRCG GH +K+C
Sbjct: 51 PDICYRCGESGHLAKDC 67
Score = 30.7 bits (66), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPK 630
D ++CY CG GH K+C K
Sbjct: 116 DEQKCYSCGEFGHIQKDCTK 135
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 159 CYRCGESGHLAREC 172
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 680 QCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 585
+C++CGR GHW++ECP G R G R R G
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGR-GMRSRGRG 35
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 686 PEQCYRCGRGGHWSKEC 636
P+ CYRCG GH +K+C
Sbjct: 51 PDICYRCGESGHLAKDC 67
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKEC 636
+ CY CGRGGH +K+C
Sbjct: 72 DACYNCGRGGHIAKDC 87
Score = 30.7 bits (66), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPK 630
D ++CY CG GH K+C K
Sbjct: 115 DEQKCYSCGEFGHIQKDCTK 134
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 158 CYRCGESGHLAREC 171
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 680 QCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 585
+C++CGR GHW++ECP G R G R R G
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGR-GMRSRGRG 35
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 686 PEQCYRCGRGGHWSKEC 636
P+ CYRCG GH +K+C
Sbjct: 44 PDICYRCGESGHLAKDC 60
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKEC 636
+ CY CGRGGH +K+C
Sbjct: 65 DACYNCGRGGHIAKDC 80
Score = 30.7 bits (66), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPK 630
D ++CY CG GH K+C K
Sbjct: 108 DEQKCYSCGEFGHIQKDCTK 127
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 151 CYRCGESGHLAREC 164
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 680 QCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 585
+C++CGR GHW++ECP G R G R R G
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGR-GMRSRGRG 35
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 686 PEQCYRCGRGGHWSKEC 636
P+ CYRCG GH +K+C
Sbjct: 44 PDICYRCGESGHLAKDC 60
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKEC 636
+ CY CGRGGH +K+C
Sbjct: 65 DACYNCGRGGHIAKDC 80
Score = 30.7 bits (66), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPK 630
D ++CY CG GH K+C K
Sbjct: 108 DEQKCYSCGEFGHIQKDCTK 127
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 151 CYRCGESGHLAREC 164
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 680 QCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 585
+C++CGR GHW++ECP G R G R R G
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGR-GMRSRGRG 35
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 686 PEQCYRCGRGGHWSKEC 636
P+ CYRCG GH +K+C
Sbjct: 51 PDICYRCGESGHLAKDC 67
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKEC 636
+ CY CGRGGH +K+C
Sbjct: 72 DACYNCGRGGHIAKDC 87
Score = 30.7 bits (66), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPK 630
D ++CY CG GH K+C K
Sbjct: 115 DEQKCYSCGEFGHIQKDCTK 134
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 158 CYRCGESGHLAREC 171
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 680 QCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 585
+C++CGR GHW++ECP G R G R R G
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGR-GMRSRGRG 35
Score = 32.7 bits (71), Expect = 1.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKEC 636
+ CY CGRGGH +K+C
Sbjct: 62 DACYNCGRGGHIAKDC 77
Score = 31.9 bits (69), Expect = 2.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 710 RQRPGM-GDPEQCYRCGRGGHWSKEC 636
R R G D + CYRCG GH +K+C
Sbjct: 32 RGRGGFTSDRDICYRCGESGHLAKDC 57
Score = 30.7 bits (66), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPK 630
D ++CY CG GH K+C K
Sbjct: 105 DEQKCYSCGEFGHIQKDCTK 124
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 148 CYRCGESGHLAREC 161
>AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ45949 fis, clone PLACE7007973. ).
Length = 483
Score = 35.1 bits (77), Expect = 0.25
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 686 PEQCYRCGRGGHWSKECP 633
P CY+CG+ GHW CP
Sbjct: 434 PGNCYQCGKPGHWKANCP 451
>BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type and
RNA binding motif 1 protein.
Length = 217
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPKALGPDR 612
D +CY CG GH S CPK + +R
Sbjct: 103 DKSKCYECGESGHLSYACPKNMLGER 128
>BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein.
Length = 140
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPKALGPDR 612
D +CY CG GH S CPK + +R
Sbjct: 103 DKSKCYECGESGHLSYACPKNMLGER 128
>BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for
IMAGE:3609027) protein.
Length = 141
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPKALGPDR 612
D +CY CG GH S CPK + +R
Sbjct: 103 DKSKCYECGESGHLSYACPKNMLGER 128
>AF229126-5|AAF43197.1| 421|Homo sapiens acetylcholinesterase
collagen-like tail subunit isoform III protein.
Length = 421
Score = 33.1 bits (72), Expect = 1.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = +2
Query: 608 RCGRGPAPSGTPWTSGPRGHSGSTAR----GRPCP 700
R GR P P G P +GP+G G R GRP P
Sbjct: 68 RGGRSPGPPGLPGKTGPKGEKGELGRPGRKGRPGP 102
>AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein.
Length = 217
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 689 DPEQCYRCGRGGHWSKECPKALGPDR 612
D +CY CG GH S CPK + +R
Sbjct: 103 DKSKCYECGESGHLSYACPKNMLGER 128
>BC063609-1|AAH63609.1| 423|Homo sapiens NFKBIE protein protein.
Length = 423
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 586 PNARSRKPLRSGPSAFGHSLDQWPPRPQR*HCSGSPMPGR 705
P R+ LR+GPS HS + PPR R C P PG+
Sbjct: 2 PALRTLSSLRAGPSE-PHSPGRRPPRAGRPLCQADPQPGK 40
>BC011676-1|AAH11676.2| 423|Homo sapiens NFKBIE protein protein.
Length = 423
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 586 PNARSRKPLRSGPSAFGHSLDQWPPRPQR*HCSGSPMPGR 705
P R+ LR+GPS HS + PPR R C P PG+
Sbjct: 2 PALRTLSSLRAGPSE-PHSPGRRPPRAGRPLCQADPQPGK 40
>AL139392-10|CAI20103.1| 500|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells inhibitor, e
protein.
Length = 500
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 586 PNARSRKPLRSGPSAFGHSLDQWPPRPQR*HCSGSPMPGR 705
P R+ LR+GPS HS + PPR R C P PG+
Sbjct: 79 PALRTLSSLRAGPSE-PHSPGRRPPRAGRPLCQADPQPGK 117
>D82344-1|BAA11555.1| 314|Homo sapiens NBPhox protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 614 GRGPAPSGTPWTSGPRGHSGSTARGRPCPXAA 709
G GP+P+G P +GP G G +G AA
Sbjct: 215 GGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAA 246
>BC017199-1|AAH17199.1| 314|Homo sapiens paired-like homeobox 2b
protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 614 GRGPAPSGTPWTSGPRGHSGSTARGRPCPXAA 709
G GP+P+G P +GP G G +G AA
Sbjct: 215 GGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAA 246
>AF117979-1|AAD26698.1| 314|Homo sapiens homeodomain transcription
factor NBPHOX protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 614 GRGPAPSGTPWTSGPRGHSGSTARGRPCPXAA 709
G GP+P+G P +GP G G +G AA
Sbjct: 215 GGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAA 246
>AB015671-1|BAA82670.1| 314|Homo sapiens NBPhox protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 614 GRGPAPSGTPWTSGPRGHSGSTARGRPCPXAA 709
G GP+P+G P +GP G G +G AA
Sbjct: 215 GGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAA 246
>AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1495
Score = 31.9 bits (69), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALG 621
++C+ CGR GH KECP+ G
Sbjct: 1451 KRCFICGREGHIKKECPQFKG 1471
>AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1259
Score = 31.9 bits (69), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALG 621
++C+ CGR GH KECP+ G
Sbjct: 1215 KRCFICGREGHIKKECPQFKG 1235
>AL353678-2|CAH71515.1| 784|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 784
Score = 31.9 bits (69), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALG 621
++C+ CGR GH KECP+ G
Sbjct: 740 KRCFICGREGHIKKECPQFKG 760
>AL353678-1|CAH71514.1| 395|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 395
Score = 31.9 bits (69), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALG 621
++C+ CGR GH KECP+ G
Sbjct: 351 KRCFICGREGHIKKECPQFKG 371
>AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1495
Score = 31.9 bits (69), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALG 621
++C+ CGR GH KECP+ G
Sbjct: 1451 KRCFICGREGHIKKECPQFKG 1471
>AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1259
Score = 31.9 bits (69), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALG 621
++C+ CGR GH KECP+ G
Sbjct: 1215 KRCFICGREGHIKKECPQFKG 1235
>AL137849-2|CAI14919.1| 784|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 784
Score = 31.9 bits (69), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALG 621
++C+ CGR GH KECP+ G
Sbjct: 740 KRCFICGREGHIKKECPQFKG 760
>AL137849-1|CAI14918.1| 395|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 395
Score = 31.9 bits (69), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALG 621
++C+ CGR GH KECP+ G
Sbjct: 351 KRCFICGREGHIKKECPQFKG 371
>AK023471-1|BAB14584.1| 395|Homo sapiens protein ( Homo sapiens
cDNA FLJ13409 fis, clone PLACE1001716. ).
Length = 395
Score = 31.9 bits (69), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALG 621
++C+ CGR GH KECP+ G
Sbjct: 351 KRCFICGREGHIKKECPQFKG 371
>AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein.
Length = 1090
Score = 31.9 bits (69), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALG 621
++C+ CGR GH KECP+ G
Sbjct: 1046 KRCFICGREGHIKKECPQFKG 1066
>M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein.
Length = 434
Score = 31.5 bits (68), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 698 GMGDPEQCYRCGRGGHWSKECPKALGPDRNG 606
G P+ C RC +G HW+ +C D+NG
Sbjct: 343 GREPPDLCPRCKKGKHWASQCRSKF--DKNG 371
>DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein.
Length = 668
Score = 31.5 bits (68), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 698 GMGDPEQCYRCGRGGHWSKECPKALGPDRNG 606
G P+ C RC +G HW+ +C D+NG
Sbjct: 575 GREPPDLCPRCKKGKHWASQCRSKF--DKNG 603
>BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein.
Length = 239
Score = 31.5 bits (68), Expect = 3.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
++C+RCG GH S C K + + G R AF +
Sbjct: 187 DRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQ 220
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 31.5 bits (68), Expect = 3.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
++C+RCG GH S C K + + G R AF +
Sbjct: 351 DRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQ 384
>BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein.
Length = 410
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 599 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP 694
RG R RG APS + PRG +G + RG P
Sbjct: 346 RGGRGARGAAPSRGRGAAPPRGRAGYSQRGGP 377
>BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein.
Length = 527
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 599 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP 694
RG R RG APS + PRG +G + RG P
Sbjct: 463 RGGRGARGAAPSRGRGAAPPRGRAGYSQRGGP 494
>AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein.
Length = 561
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 599 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP 694
RG R RG APS + PRG +G + RG P
Sbjct: 498 RGGRGARGAAPSRGRGAAPPRGRAGYSQRGGP 529
>AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein.
Length = 588
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 599 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP 694
RG R RG APS + PRG +G + RG P
Sbjct: 463 RGGRGARGAAPSRGRGAAPPRGRAGYSQRGGP 494
>AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein.
Length = 623
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 599 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP 694
RG R RG APS + PRG +G + RG P
Sbjct: 498 RGGRGARGAAPSRGRGAAPPRGRAGYSQRGGP 529
>AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein.
Length = 623
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 599 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP 694
RG R RG APS + PRG +G + RG P
Sbjct: 498 RGGRGARGAAPSRGRGAAPPRGRAGYSQRGGP 529
>AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein.
Length = 562
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 599 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP 694
RG R RG APS + PRG +G + RG P
Sbjct: 498 RGGRGARGAAPSRGRGAAPPRGRAGYSQRGGP 529
>AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 404
Score = 31.5 bits (68), Expect = 3.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 683 EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
++C+RCG GH S C K + + G R AF +
Sbjct: 352 DRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQ 385
>AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 623
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 599 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP 694
RG R RG APS + PRG +G + RG P
Sbjct: 498 RGGRGARGAAPSRGRGAAPPRGRAGYSQRGGP 529
>AK126408-1|BAC86543.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ44444 fis, clone UTERU2020491. ).
Length = 131
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +1
Query: 607 PLRSGPSAFGHSLDQWPPRPQR*HCSGSPMPGR 705
PLR+GP G L WP R R C+G GR
Sbjct: 45 PLRAGPGRGGRPLRAWPGRGGRPLCAGPGRGGR 77
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 31.5 bits (68), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 698 GMGDPEQCYRCGRGGHWSKECPKALGPDRNG 606
G P+ C RC +G HW+ +C D+NG
Sbjct: 575 GREPPDLCPRCKKGKHWASQCRSKF--DKNG 603
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 31.5 bits (68), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 698 GMGDPEQCYRCGRGGHWSKECPKALGPDRNG 606
G P+ C RC +G HW+ +C D+NG
Sbjct: 575 GREPPDLCPRCKKGKHWASQCRSKF--DKNG 603
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 31.5 bits (68), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 698 GMGDPEQCYRCGRGGHWSKECPKALGPDRNG 606
G P+ C RC +G HW+ +C D+NG
Sbjct: 575 GREPPDLCPRCKKGKHWASQCRSKF--DKNG 603
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 31.5 bits (68), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 698 GMGDPEQCYRCGRGGHWSKECPKALGPDRNG 606
G P+ C RC +G HW+ +C D+NG
Sbjct: 575 GREPPDLCPRCKKGKHWASQCRSKF--DKNG 603
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 31.5 bits (68), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 698 GMGDPEQCYRCGRGGHWSKECPKALGPDRNG 606
G P+ C RC +G HW+ +C D+NG
Sbjct: 575 GREPPDLCPRCKKGKHWASQCRSKF--DKNG 603
>AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein.
Length = 562
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 599 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP 694
RG R RG APS + PRG +G + RG P
Sbjct: 498 RGGRGARGAAPSRGRGAAPPRGRAGYSQRGGP 529
>AF074086-5|AAD21095.2| 666|Homo sapiens gag protein.
Length = 666
Score = 31.5 bits (68), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 698 GMGDPEQCYRCGRGGHWSKECPKALGPDRNG 606
G P+ C RC +G HW+ +C D+NG
Sbjct: 575 GREPPDLCPRCKKGKHWASQCRSKF--DKNG 603
>AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein.
Length = 666
Score = 31.5 bits (68), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 698 GMGDPEQCYRCGRGGHWSKECPKALGPDRNG 606
G P+ C RC +G HW+ +C D+NG
Sbjct: 575 GREPPDLCPRCKKGKHWASQCRSKF--DKNG 603
>AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein.
Length = 623
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 599 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP 694
RG R RG APS + PRG +G + RG P
Sbjct: 498 RGGRGARGAAPSRGRGAAPPRGRAGYSQRGGP 529
>AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 534
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 599 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP 694
RG R RG APS + PRG +G + RG P
Sbjct: 470 RGGRGARGAAPSRGRGAAPPRGRAGYSQRGGP 501
>L41887-1|AAA88098.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7 protein.
Length = 238
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 689 DP-EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
DP ++CY CG GH++ +C + R+ R R+ R
Sbjct: 101 DPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSR 137
>L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein.
Length = 238
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 689 DP-EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
DP ++CY CG GH++ +C + R+ R R+ R
Sbjct: 101 DPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSR 137
>BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 689 DP-EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
DP ++CY CG GH++ +C + R+ R R+ R
Sbjct: 101 DPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSR 137
>BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein.
Length = 919
Score = 31.1 bits (67), Expect = 4.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 677 CYRCGRGGHWSKECP 633
C+RCG+ GH+ K CP
Sbjct: 161 CFRCGKPGHYIKNCP 175
>BC054506-1|AAH54506.1| 285|Homo sapiens C1QTNF2 protein protein.
Length = 285
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 623 PAPSGTPWTSGPRGHSGSTARGRPCPXAAGH 715
P GTP GP+G G PC +GH
Sbjct: 117 PGKHGTPGKKGPKGKKGEPGLPGPCSCGSGH 147
>BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 689 DP-EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
DP ++CY CG GH++ +C + R+ R R+ R
Sbjct: 101 DPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSR 137
>BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 689 DP-EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
DP ++CY CG GH++ +C + R+ R R+ R
Sbjct: 101 DPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSR 137
>BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 689 DP-EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
DP ++CY CG GH++ +C + R+ R R+ R
Sbjct: 101 DPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSR 137
>BC013906-1|AAH13906.1| 316|Homo sapiens FLJ36031 protein protein.
Length = 316
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 602 GNRCGRGPAPSGTPWTSGPRGHSGSTARG 688
G RC + AP+ TP + PRG ARG
Sbjct: 123 GGRCPQEEAPAATPTAAAPRGELPGQARG 151
>BC011699-1|AAH11699.1| 285|Homo sapiens C1QTNF2 protein protein.
Length = 285
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 623 PAPSGTPWTSGPRGHSGSTARGRPCPXAAGH 715
P GTP GP+G G PC +GH
Sbjct: 117 PGKHGTPGKKGPKGKKGEPGLPGPCSCGSGH 147
>BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 689 DP-EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
DP ++CY CG GH++ +C + R+ R R+ R
Sbjct: 101 DPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSR 137
>AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protein 3
protein.
Length = 238
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 689 DP-EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
DP ++CY CG GH++ +C + R+ R R+ R
Sbjct: 101 DPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSR 137
>AY358839-1|AAQ89198.1| 285|Homo sapiens CTRP2 protein.
Length = 285
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 623 PAPSGTPWTSGPRGHSGSTARGRPCPXAAGH 715
P GTP GP+G G PC +GH
Sbjct: 117 PGKHGTPGKKGPKGKKGEPGLPGPCSCGSGH 147
>AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich
splicing factor 7 type B protein.
Length = 238
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 689 DP-EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
DP ++CY CG GH++ +C + R+ R R+ R
Sbjct: 101 DPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSR 137
>AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular
protein PACT protein.
Length = 1625
Score = 31.1 bits (67), Expect = 4.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 677 CYRCGRGGHWSKECP 633
C+RCG+ GH+ K CP
Sbjct: 28 CFRCGKPGHYIKNCP 42
>AF329836-1|AAK17960.1| 285|Homo sapiens complement-c1q tumor
necrosis factor-related protein protein.
Length = 285
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 623 PAPSGTPWTSGPRGHSGSTARGRPCPXAAGH 715
P GTP GP+G G PC +GH
Sbjct: 117 PGKHGTPGKKGPKGKKGEPGLPGPCSCGSGH 147
>AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 689 DP-EQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGR 582
DP ++CY CG GH++ +C + R+ R R+ R
Sbjct: 101 DPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSR 137
>AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding
protein 6 isoform 2 protein.
Length = 1758
Score = 31.1 bits (67), Expect = 4.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 677 CYRCGRGGHWSKECP 633
C+RCG+ GH+ K CP
Sbjct: 161 CFRCGKPGHYIKNCP 175
>AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding
protein 6 isoform 1 protein.
Length = 1792
Score = 31.1 bits (67), Expect = 4.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 677 CYRCGRGGHWSKECP 633
C+RCG+ GH+ K CP
Sbjct: 161 CFRCGKPGHYIKNCP 175
>AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein.
Length = 622
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC-PKALGPDRNGFRD 597
C+RCGR GH +EC K DR G +
Sbjct: 508 CFRCGREGHLMRECRAKFPARDRQGIEN 535
>AB033040-1|BAA86528.1| 462|Homo sapiens KIAA1214 protein protein.
Length = 462
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 614 GRGPAPSGTPWTSGPRGHSGSTARGRP 694
G+GPAPS P SGPRG G +R RP
Sbjct: 2 GKGPAPSARP-ESGPRG--GCASRPRP 25
>Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V)
protein.
Length = 1496
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 623 PAPSGTPWTSGPRGHSGSTARGRPCP 700
P P+G P + GPRG G +GRP P
Sbjct: 131 PGPAGPPGSQGPRGERG--PKGRPGP 154
>J04478-1|AAA51859.1| 463|Homo sapiens COL5A2 protein.
Length = 463
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 623 PAPSGTPWTSGPRGHSGSTARGRPCP 700
P P+G P + GPRG G +GRP P
Sbjct: 131 PGPAGPPGSQGPRGERG--PKGRPGP 154
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 674 YRCGRGGHWSKECPKALGPDRNG 606
+ CG GHW++ CP+ R G
Sbjct: 7 FACGHSGHWARGCPRGGAGGRRG 29
Score = 29.9 bits (64), Expect = 9.5
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CY CGR GH +K+C
Sbjct: 67 CYNCGRSGHIAKDC 80
>AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid
binding protein protein.
Length = 54
Score = 30.3 bits (65), Expect = 7.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 677 CYRCGRGGHWSKEC 636
CYRCG GH ++EC
Sbjct: 35 CYRCGESGHLAREC 48
>AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen
preproprotein variant protein.
Length = 1502
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 623 PAPSGTPWTSGPRGHSGSTARGRPCP 700
P P+G P + GPRG G +GRP P
Sbjct: 134 PGPAGPPGSQGPRGERG--PKGRPGP 157
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 29.9 bits (64), Expect = 9.5
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 602 GNRCGRGPA-PSGTPWTSGPRGHSG 673
G + RGPA P G P GPRGH G
Sbjct: 1450 GPKGDRGPAGPPGHPGPPGPRGHKG 1474
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 29.9 bits (64), Expect = 9.5
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 602 GNRCGRGPA-PSGTPWTSGPRGHSG 673
G + RGPA P G P GPRGH G
Sbjct: 1485 GPKGDRGPAGPPGHPGPPGPRGHKG 1509
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 29.9 bits (64), Expect = 9.5
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 602 GNRCGRGPA-PSGTPWTSGPRGHSG 673
G + RGPA P G P GPRGH G
Sbjct: 1450 GPKGDRGPAGPPGHPGPPGPRGHKG 1474
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 29.9 bits (64), Expect = 9.5
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 602 GNRCGRGPA-PSGTPWTSGPRGHSG 673
G + RGPA P G P GPRGH G
Sbjct: 1368 GPKGDRGPAGPPGHPGPPGPRGHKG 1392
>AL138761-3|CAI12397.1| 65|Homo sapiens collagen type XVII alpha 1
protein.
Length = 65
Score = 29.9 bits (64), Expect = 9.5
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 602 GNRCGRGPA-PSGTPWTSGPRGHSG 673
G + RGPA P G P GPRGH G
Sbjct: 18 GPKGDRGPAGPPGHPGPPGPRGHKG 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,754,110
Number of Sequences: 237096
Number of extensions: 2146718
Number of successful extensions: 11743
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 8373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11683
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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