Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12j24f
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 72 4e-13
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 72 4e-13
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 71 8e-13
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 66 2e-11
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 66 2e-11
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 66 2e-11
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 66 2e-11
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 66 2e-11
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 66 2e-11
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 66 2e-11
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 65 3e-11
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 65 3e-11
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 62 4e-10
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 58 4e-09
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 58 6e-09
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 56 1e-08
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 54 6e-08
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 52 3e-07
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 52 3e-07
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 51 5e-07
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 51 5e-07
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 48 4e-06
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 48 4e-06
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 47 1e-05
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 47 1e-05
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 47 1e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 46 2e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 46 2e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 46 2e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 46 2e-05
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 46 3e-05
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 46 3e-05
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 46 3e-05
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 46 3e-05
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 46 3e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 44 6e-05
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 44 8e-05
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 44 1e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 40 0.001
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 40 0.001
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 40 0.001
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 40 0.001
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 0.002
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 40 0.002
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 39 0.002
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 39 0.002
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 39 0.002
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 39 0.002
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 39 0.003
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 39 0.003
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 38 0.004
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 38 0.004
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 38 0.004
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 38 0.004
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 38 0.004
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 37 0.009
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 37 0.009
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 36 0.022
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 36 0.028
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 35 0.038
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.038
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.038
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.050
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 33 0.11
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 33 0.20
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 32 0.35
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 32 0.35
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 31 0.61
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 30 1.1
U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical pr... 30 1.1
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 30 1.1
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 30 1.1
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 30 1.1
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.4
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.4
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 30 1.4
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 30 1.4
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 30 1.4
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 29 2.5
AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical ... 29 2.5
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 28 5.7
L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human nie... 28 5.7
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 28 5.7
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 71.7 bits (168), Expect = 4e-13
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Frame = +3
Query: 129 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 287
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 51 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 110
Query: 288 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELF 446
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D + +LF
Sbjct: 111 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLF 170
Query: 447 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 171 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 223
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/178 (18%), Positives = 74/178 (41%), Gaps = 32/178 (17%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 314
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 211
Query: 315 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 437
+ G +K+ +++K ++V NL + ++
Sbjct: 212 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 271
Query: 438 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 590
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 272 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIA 329
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 71.7 bits (168), Expect = 4e-13
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Frame = +3
Query: 129 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 287
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 288 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELF 446
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D + +LF
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLF 233
Query: 447 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 234 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 286
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/178 (18%), Positives = 74/178 (41%), Gaps = 32/178 (17%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 314
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 315 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 437
+ G +K+ +++K ++V NL + ++
Sbjct: 275 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 334
Query: 438 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 590
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 335 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIA 392
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 70.5 bits (165), Expect = 8e-13
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Frame = +3
Query: 129 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 287
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 288 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELF 446
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D + ++F
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVF 233
Query: 447 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 234 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 286
Score = 48.0 bits (109), Expect = 5e-06
Identities = 32/177 (18%), Positives = 73/177 (41%), Gaps = 32/177 (18%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 314
+++ N D + L +F K+G + C+++ + +GFV N + A+Q L+
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 315 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 437
+ G +K+ +++K ++V NL + ++
Sbjct: 275 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 334
Query: 438 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V +
Sbjct: 335 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAI 391
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 66.9 bits (156), Expect = 1e-11
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 25/169 (14%)
Frame = +3
Query: 147 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQ 302
F +F+G+LS + L+ F K+G V E ++R+ YGFV N+Q AI
Sbjct: 135 FHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIA 194
Query: 303 NLNGELVHGQAIKIEAAKSR---------------KAPSTPTTKIFVGNLTDKTRAPEVR 437
+NG+ + +A++ A + + T ++VGN++ +T ++R
Sbjct: 195 GMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLR 254
Query: 438 ELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMK 578
+LF +G + E I + Y FV + AI E+NG + G ++
Sbjct: 255 DLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVR 303
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVGREAIQNLNGELVH 326
+++GN+S +TT+ADLR LF YG + E I + Y FV E ++ +AI +NG+ +
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMA 298
Query: 327 GQAIKIEAAKSRKAPS 374
G ++ +++ P+
Sbjct: 299 GNQVRCSWGRTQAVPN 314
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 65.7 bits (153), Expect = 2e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 114 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 260
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 261 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 440
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 441 LFQKFGTVVECDIVRN 488
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 345 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 488
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 308
+FI +L ++DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 309 NGELVHGQAIKIEAAKSRKAP 371
NG + + +K++ R P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 489 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
+GFV + +AI +NG + + +KVQL
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 65.7 bits (153), Expect = 2e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 114 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 260
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 261 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 440
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 441 LFQKFGTVVECDIVRN 488
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 345 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 488
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 308
+FI +L ++DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 309 NGELVHGQAIKIEAAKSRKAP 371
NG + + +K++ R P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 489 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
+GFV + +AI +NG + + +KVQL
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 65.7 bits (153), Expect = 2e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 114 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 260
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 261 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 440
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 441 LFQKFGTVVECDIVRN 488
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 345 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 488
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 308
+FI +L ++DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 430 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 489
Query: 309 NGELVHGQAIKIEAAKSRKAP 371
NG + + +K++ R P
Sbjct: 490 NGFQIGSKRLKVQLKVDRGNP 510
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 489 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
+GFV + +AI +NG + + +KVQL
Sbjct: 471 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 503
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 65.7 bits (153), Expect = 2e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 114 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 260
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 261 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 440
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 441 LFQKFGTVVECDIVRN 488
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 345 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 488
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 65.7 bits (153), Expect = 2e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 114 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 260
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 261 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 440
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 441 LFQKFGTVVECDIVRN 488
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 345 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 488
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 65.7 bits (153), Expect = 2e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 114 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 260
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 261 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 440
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 441 LFQKFGTVVECDIVRN 488
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 345 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 488
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 65.7 bits (153), Expect = 2e-11
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +3
Query: 114 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------F 260
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 261 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 440
H ++ + A+ N+ +++ G ++ K + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 441 LFQKFGTVVECDIVRN 488
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 345 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 488
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 308
+FI +L ++DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 309 NGELVHGQAIKIEAAKSRKAP 371
NG + + +K++ R P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 489 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
+GFV + +AI +NG + + +KVQL
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/69 (42%), Positives = 46/69 (66%)
Frame = +3
Query: 384 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVD 563
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +D
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 564 GQPMKVQLS 590
G+ + ++ S
Sbjct: 62 GKVVNIKKS 70
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 329
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 330 QAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPE 431
+ + I+ + S+ P+ +D+ R P+
Sbjct: 63 KVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/69 (42%), Positives = 46/69 (66%)
Frame = +3
Query: 384 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVD 563
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +D
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 564 GQPMKVQLS 590
G+ + ++ S
Sbjct: 62 GKVVNIKKS 70
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 329
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 330 QAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPE 431
+ + I+ + S+ P+ +D+ R P+
Sbjct: 63 KVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 61.7 bits (143), Expect = 4e-10
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----YGFVHMENEQVGREAIQNLNGE 317
+++GNL TE + LF + G+V + ++ + Y FV + +A+Q +N
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKR 107
Query: 318 LVHGQAIKIEAA-----KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 482
L+ + +K+ A + K +T +FVG+L+ + ++RE FQ FG V + ++
Sbjct: 108 LLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVI 167
Query: 483 RN--------YGFVHLDATGDVNDAIKELNG 551
R+ YGFV + AI+++NG
Sbjct: 168 RDTNTTKSKGYGFVSYPKREEAERAIEQMNG 198
Score = 58.4 bits (135), Expect = 4e-09
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Frame = +3
Query: 123 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENE 278
SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 127 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 186
Query: 279 QVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFVG 401
+ AI+ +NG+ + + I+ A + S T ++VG
Sbjct: 187 EEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVG 246
Query: 402 NLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 569
N+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 247 NIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 303
Score = 31.9 bits (69), Expect = 0.35
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +3
Query: 321 VHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---- 488
+H + + E P T ++VGNL + LF + G+V + ++ +
Sbjct: 26 MHSKLAEREGFHLGNGSDEPRT-LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSND 84
Query: 489 -YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 581
Y FV G + A++ +N ++ + MKV
Sbjct: 85 PYAFVEFSDHGQASQALQTMNKRLLLDREMKV 116
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 58.4 bits (135), Expect = 4e-09
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Frame = +3
Query: 123 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENE 278
SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 14 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 73
Query: 279 QVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFVG 401
+ AI+ +NG+ + + I+ A + S T ++VG
Sbjct: 74 EEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVG 133
Query: 402 NLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 569
N+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 134 NIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 190
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 58.4 bits (135), Expect = 4e-09
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Frame = +3
Query: 123 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENE 278
SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 24 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 83
Query: 279 QVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFVG 401
+ AI+ +NG+ + + I+ A + S T ++VG
Sbjct: 84 EEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVG 143
Query: 402 NLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 569
N+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 144 NIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 200
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 58.4 bits (135), Expect = 4e-09
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Frame = +3
Query: 123 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENE 278
SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 95 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 154
Query: 279 QVGREAIQNLNGELVHGQAIKIEAAKSR-------------------KAPSTPTTKIFVG 401
+ AI+ +NG+ + + I+ A + S T ++VG
Sbjct: 155 EEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVG 214
Query: 402 NLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 569
N+ T E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 215 NIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 271
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 57.6 bits (133), Expect = 6e-09
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 21/154 (13%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----YGFVHMENEQVGREAIQNLNGE 317
+F+ NL T+ L LF + G V++ I+ Y FV + A+Q+ NG
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHNGR 101
Query: 318 LVHGQAIKIEAAKSRKAP----STPTTK----IFVGNLTDKTRAPEVRELFQKFGTVVEC 473
+ + + + A + P S P T +FVG+L + + ++RE F KFG V E
Sbjct: 102 ELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEA 161
Query: 474 DIVRN--------YGFVHLDATGDVNDAIKELNG 551
I+R+ YGFV D AI E+NG
Sbjct: 162 KIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNG 195
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 123 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENE 278
SK + F +F+G+L + LR F K+G V E I+R+ YGFV
Sbjct: 124 SKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRR 183
Query: 279 QVGREAIQNLNGELVHGQAIK 341
+ AI +NG + + I+
Sbjct: 184 EDAERAIDEMNGAWLGRRTIR 204
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 56.4 bits (130), Expect = 1e-08
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 16/160 (10%)
Frame = +3
Query: 135 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGR 290
G + I L T+ ++R LF G + C +VR+ YGFV+ E+
Sbjct: 38 GESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDAL 97
Query: 291 EAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 470
A+ + NG + + IK+ A+ + ++V + E+ +F+ FG ++
Sbjct: 98 RAVSSFNGLRLQNKTIKVSYARPSN-DQIKGSNLYVSGIPKSMTLHELESIFRPFGQIIT 156
Query: 471 CDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDG 566
I+ + GFV D + + AIK LNG + G
Sbjct: 157 SRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPSG 196
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +3
Query: 138 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREA 296
T + +F+ NLS T + L LF ++G +V I+R+ Y FV M N A
Sbjct: 371 TAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNA 430
Query: 297 IQNLNGELVHGQAIKI 344
+ +LNG + G+ +++
Sbjct: 431 MLSLNGTNLAGKTLQV 446
Score = 37.5 bits (83), Expect = 0.007
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Frame = +3
Query: 312 GELVHGQAIKIEAAKSRKAPSTPTTK--IFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 485
G H Q + A+ + P + T +FV NL+ T + +LF +FG +V I+R
Sbjct: 348 GLAAHAQLSALSASVAATLPPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILR 407
Query: 486 N-------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 581
+ Y FV + + +A+ LNG + G+ ++V
Sbjct: 408 DLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
Score = 35.1 bits (77), Expect = 0.038
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Frame = +3
Query: 384 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIK 539
T + + L EVR LF G + C +VR+ YGFV+ D A+
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 540 ELNGMMVDGQPMKV 581
NG+ + + +KV
Sbjct: 102 SFNGLRLQNKTIKV 115
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 54.4 bits (125), Expect = 6e-08
Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 21/179 (11%)
Frame = +3
Query: 114 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHME 272
+P ++ G G IFI NL + F +G ++ C + + YGFVH E
Sbjct: 136 DPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Query: 273 NEQVGREAIQNLNGELVHGQAI-------KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPE 431
E + AI+ +NG L+ + + + + K T +FV N + +
Sbjct: 194 TEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEK 253
Query: 432 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
+ +F KFG + ++ + +GFV A+++LN +++G K+ +
Sbjct: 254 LSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSV 312
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 54.4 bits (125), Expect = 6e-08
Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 21/179 (11%)
Frame = +3
Query: 114 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHME 272
+P ++ G G IFI NL + F +G ++ C + + YGFVH E
Sbjct: 136 DPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Query: 273 NEQVGREAIQNLNGELVHGQAI-------KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPE 431
E + AI+ +NG L+ + + + + K T +FV N + +
Sbjct: 194 TEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEK 253
Query: 432 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
+ +F KFG + ++ + +GFV A+++LN +++G K+ +
Sbjct: 254 LSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSV 312
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 52.0 bits (119), Expect = 3e-07
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 138 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGREAIQNLNG 314
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + ++G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDG 172
Query: 315 ELVHGQAIKIEAA 353
++HG+ +++ A
Sbjct: 173 RIIHGRQVRVRFA 185
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 363 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDAIK 539
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 540 ELNGMMVDGQPMKVQLS 590
++G ++ G+ ++V+ +
Sbjct: 169 AIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 52.0 bits (119), Expect = 3e-07
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 138 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGREAIQNLNG 314
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + ++G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDG 172
Query: 315 ELVHGQAIKIEAA 353
++HG+ +++ A
Sbjct: 173 RIIHGRQVRVRFA 185
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 363 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDAIK 539
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 540 ELNGMMVDGQPMKVQLS 590
++G ++ G+ ++V+ +
Sbjct: 169 AIDGRIIHGRQVRVRFA 185
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +3
Query: 141 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 302
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 303 NLNGELVHGQAIKIEAAKSR 362
L+G ++ G+ I++ A +R
Sbjct: 211 ELHGSMIEGRKIEVNCATAR 230
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Frame = +3
Query: 279 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 458
Q G+ + G A+ + P P ++ V N+ + R P+++ +F+KFG
Sbjct: 119 QQGQPVVATTAGSTNGSAAVTQPDPSTSSGPDGPK-RLHVSNIPFRFRDPDLKTMFEKFG 177
Query: 459 TVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 581
V + +I+ N +GFV ++ D A +EL+G M++G+ ++V
Sbjct: 178 VVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +3
Query: 141 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 302
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 303 NLNGELVHGQAIKIEAAKSR 362
L+G ++ G+ I++ A +R
Sbjct: 211 ELHGSMIEGRKIEVNCATAR 230
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Frame = +3
Query: 279 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 458
Q G+ + G A+ + P P ++ V N+ + R P+++ +F+KFG
Sbjct: 119 QQGQPVVATTAGSTNGSAAVTQPDPSTSSGPDGPK-RLHVSNIPFRFRDPDLKTMFEKFG 177
Query: 459 TVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 581
V + +I+ N +GFV ++ D A +EL+G M++G+ ++V
Sbjct: 178 VVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 329
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 330 QAIKIEAAKSR 362
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 566
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 567 Q 569
+
Sbjct: 64 E 64
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 329
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 330 QAIKIEAAKSR 362
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 566
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 567 Q 569
+
Sbjct: 64 E 64
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 329
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 330 QAIKIEAAKSR 362
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 566
+I++G LT + ++ F+ +G + + + +GFV D D DA+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 567 Q 569
+
Sbjct: 64 E 64
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/178 (18%), Positives = 74/178 (41%), Gaps = 32/178 (17%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 314
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 214
Query: 315 ELVHGQAIKIEAAKSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 437
+ G +K+ +++K ++V NL + ++
Sbjct: 215 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 274
Query: 438 ELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 590
+ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 275 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIA 332
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Frame = +3
Query: 267 MENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELF 446
M G I+NL+ V + + + + T ++V N D + +LF
Sbjct: 114 MRRSGAGNIFIKNLDKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLF 173
Query: 447 QKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 174 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 226
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 48.4 bits (110), Expect = 4e-06
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Frame = +3
Query: 132 PGTGTFK-IFIGNLSDKTTEADLRPLFE-----KYGTVVECDIV-RNYGFVHMENEQVGR 290
PGT + IF+ NL TTE ++R E ++ D+V R + +V MEN+Q +
Sbjct: 587 PGTEDARTIFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQ 646
Query: 291 EAIQNLNGELVHGQAIKIEAAKSRK------APSTPTTKIFVGNLTDKTRAPEVRELFQK 452
+A+ + V G+ + I A K + + +K+FV N+ + E++ LF K
Sbjct: 647 QALLK-DRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSK 705
Query: 453 FGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 590
FGTV V + FV D + + +M+ + ++V LS
Sbjct: 706 FGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALS 758
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 48.4 bits (110), Expect = 4e-06
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 308
I++G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 309 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC-DIVR 485
N ++G+ IK+ A + + IFVGNL + + + F FG +++ I+R
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 134
Query: 486 NY------GFVHLD-ATGDVND-AIKELNGMMVDGQPMKV 581
+ GF ++ A+ + +D A++ +NG + + + V
Sbjct: 135 DVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITV 174
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 48.4 bits (110), Expect = 4e-06
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 308
I++G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 309 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC-DIVR 485
N ++G+ IK+ A + + IFVGNL + + + F FG +++ I+R
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 144
Query: 486 NY------GFVHLD-ATGDVND-AIKELNGMMVDGQPMKV 581
+ GF ++ A+ + +D A++ +NG + + + V
Sbjct: 145 DVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITV 184
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 46.8 bits (106), Expect = 1e-05
Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 305
KIF+G L+ TT+ +R + ++G + + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 306 ----LNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC 473
++G+ V + K+R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 474 DIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 584
+I+ R +GFV D V+ + + MV+G V+
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQ-KSHMVNGHRCDVR 187
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 46.8 bits (106), Expect = 1e-05
Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 305
KIF+G L+ TT+ +R + ++G + + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 306 ----LNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC 473
++G+ V + K+R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 474 DIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 584
+I+ R +GFV D V+ + + MV+G V+
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQ-KSHMVNGHRCDVR 187
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 46.8 bits (106), Expect = 1e-05
Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 305
KIF+G L+ TT+ +R + ++G + + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 306 ----LNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVEC 473
++G+ V + K+R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 474 DIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 584
+I+ R +GFV D V+ + + MV+G V+
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQ-KSHMVNGHRCDVR 187
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 308
+F+GN+S +E +R +F K G V+ +V + YGF+ + Q AI+NL
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 309 NGELVHGQAIKIEAA 353
NG + G+ +++++A
Sbjct: 80 NGYELSGRILRVDSA 94
Score = 35.5 bits (78), Expect = 0.028
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Frame = +3
Query: 390 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKEL 545
+FVGN++ +R +F K G V+ +V + YGF+ AI+ L
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 546 NGMMVDGQPMKV 581
NG + G+ ++V
Sbjct: 80 NGYELSGRILRV 91
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +3
Query: 141 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 302
G ++ + N+ K E DL +FEK G VV+ +I+ N +GFV M+N A
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 303 NLNGELVHGQAIKIEAAKSR 362
NG + G+ +++ A R
Sbjct: 158 EFNGTTIEGRRVEVNLATQR 177
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELN 548
++ V N+ K R P++ +F+K G VV+ +I+ N +GFV + D + A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 549 GMMVDGQPMKVQLS 590
G ++G+ ++V L+
Sbjct: 161 GTTIEGRRVEVNLA 174
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +3
Query: 141 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 302
G ++ + N+ K E DL +FEK G VV+ +I+ N +GFV M+N A
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 303 NLNGELVHGQAIKIEAAKSR 362
NG + G+ +++ A R
Sbjct: 158 EFNGTTIEGRRVEVNLATQR 177
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELN 548
++ V N+ K R P++ +F+K G VV+ +I+ N +GFV + D + A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 549 GMMVDGQPMKVQLS 590
G ++G+ ++V L+
Sbjct: 161 GTTIEGRRVEVNLA 174
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 308
KIF+G +S + DL F +YG V + + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 309 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 464
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 90 REQTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 308
KIF+G +S + DL F +YG V + + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 309 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 464
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 90 REQTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Frame = +3
Query: 177 KTTEADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGRE-AIQNLNGELVHGQ 332
KTT+ + FE GTVV C+I R +GFV M + VG + + + ++ G+
Sbjct: 183 KTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS--VGEQNKVLAIPQHMIDGR 240
Query: 333 AIKIEAAKSRKAPSTPT-TKIFVGNLTDKTRAPEVRELF 446
++ R P+ ++IFVG LTDK ++R++F
Sbjct: 241 RCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVF 279
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = +3
Query: 372 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR-------NYGFVHLDATGDVND 530
S P I +G + KT ++ F+ GTVV C+I R +GFV + + G+ N
Sbjct: 170 SQPVDLIVLG-VDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNK 228
Query: 531 AIKELNGMMVDGQPMKVQL 587
+ + M+DG+ V++
Sbjct: 229 VL-AIPQHMIDGRRCDVKV 246
Score = 27.9 bits (59), Expect = 5.7
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLF----EKY-GTVVECDI-----VRNYGFVHMENEQVGREAI 299
+IF+G L+DK E LR +F + Y T V D+ R + FV + + + E I
Sbjct: 260 RIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAA-ERI 318
Query: 300 QNLNGELVHGQAIKIEAAKSRK 365
+ V+G ++ + A+ R+
Sbjct: 319 VSKGSLTVNGLSVGLSIAQPRE 340
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNDAIKELNGMM 557
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 558 VDGQPMKVQLS 590
+ G +V+LS
Sbjct: 64 ICGVRARVELS 74
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNDAIKELNGMM 557
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 558 VDGQPMKVQLS 590
+ G +V+LS
Sbjct: 64 ICGVRARVELS 74
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNDAIKELNGMM 557
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 558 VDGQPMKVQLS 590
+ G +V+LS
Sbjct: 64 ICGVRARVELS 74
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKELNGM 554
K++VGNL R EV ++F K+G + DI G FV + D DA++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 555 MVDGQPMKVQLS 590
DG+ ++V+ +
Sbjct: 70 EFDGRRIRVEFT 81
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 135 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 302
G+ K+++GNL E ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 303 NLNGELVHGQAIKIE 347
+G G+ I++E
Sbjct: 65 ARDGYEFDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKELNGM 554
K++VGNL R EV ++F K+G + DI G FV + D DA++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 555 MVDGQPMKVQLS 590
DG+ ++V+ +
Sbjct: 70 EFDGRRIRVEFT 81
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 135 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 302
G+ K+++GNL E ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 303 NLNGELVHGQAIKIE 347
+G G+ I++E
Sbjct: 65 ARDGYEFDGRRIRVE 79
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 44.4 bits (100), Expect = 6e-05
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Frame = +3
Query: 141 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 296
G + I NLS +TT DLR FE+YG + + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 297 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRA-PEVREL 443
+ +G+LV G+ +++ AK + PS G +T A P+V EL
Sbjct: 77 LDRTDGKLVDGRELRVTLAKYDR-PSDERGGRGGGGGRRRTAAEPDVAEL 125
Score = 37.1 bits (82), Expect = 0.009
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +3
Query: 360 RKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDA 512
R AP T + + NL+ +T ++R F+++G + + I R+ +GFV
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 513 TGDVNDAIKELNGMMVDGQPMKVQLS 590
D A+ +G +VDG+ ++V L+
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 44.0 bits (99), Expect = 8e-05
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +3
Query: 141 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 296
G + I NLS +TT DLR FE+YG + + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 297 IQNLNGELVHGQAIKIEAAK 356
+ +G+LV G+ +++ AK
Sbjct: 77 LDRTDGKLVDGRELRVTLAK 96
Score = 37.1 bits (82), Expect = 0.009
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +3
Query: 360 RKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDA 512
R AP T + + NL+ +T ++R F+++G + + I R+ +GFV
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 513 TGDVNDAIKELNGMMVDGQPMKVQLS 590
D A+ +G +VDG+ ++V L+
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----------YGFVHMENEQVGREA 296
K+F+G + E DLR LFE++G + E I+++ + H ++ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 297 IQNLNGELVHGQAIKIEAAKSRKAPSTP-----TTKIFVGNLTDKTRAPEVRELFQKFGT 461
+ + +A++++ A + P++P K+F+G L+ + EVR LF FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 462 VVECDIVR 485
+ E ++R
Sbjct: 150 LDEVTVLR 157
Score = 33.1 bits (72), Expect = 0.15
Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 10/139 (7%)
Frame = +3
Query: 201 PLFEKYGTVVECDIVRNYGFV--HMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPS 374
P YG++ NY + ME++ A+Q ++ A + R+
Sbjct: 368 PAASSYGSLAAAAAAANYSSLLSGMESQHNAAAALQL--AQIQQQAAAALPMVTPREVLG 425
Query: 375 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVND 530
+F+ +L + E+ ++F FG +V + + +GFV D
Sbjct: 426 PDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQA 485
Query: 531 AIKELNGMMVDGQPMKVQL 587
AI +NG + + +KVQL
Sbjct: 486 AITAMNGFQIGMKRLKVQL 504
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 488
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 308
+FI +L + +A+L +F +G +V + + +GFV +N + AI +
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 309 NGELVHGQAIKIEAAKSR 362
NG + + +K++ + R
Sbjct: 491 NGFQIGMKRLKVQLKRPR 508
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/66 (24%), Positives = 40/66 (60%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 329
+++IG L ++ ++ D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 330 QAIKIE 347
+ + +E
Sbjct: 63 ERVILE 68
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 566
++++G L ++ +V F+ +G + + + +GFV D +DA+ +LNG + G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 567 Q 569
+
Sbjct: 63 E 63
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----------YGFVHMENEQVGREA 296
K+F+G + E DLR LFE++G + E I+++ + H ++ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 297 IQNLNGELVHGQAIKIEAAKSRKAPSTP-----TTKIFVGNLTDKTRAPEVRELFQKFGT 461
+ + +A++++ A + P++P K+F+G L+ + EVR LF FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 462 VVECDIVR 485
+ E ++R
Sbjct: 150 LDEVTVLR 157
Score = 33.1 bits (72), Expect = 0.15
Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 10/139 (7%)
Frame = +3
Query: 201 PLFEKYGTVVECDIVRNYGFV--HMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPS 374
P YG++ NY + ME++ A+Q ++ A + R+
Sbjct: 368 PAASSYGSLAAAAAAANYSSLLSGMESQHNAAAALQL--AQIQQQAAAALPMVTPREVLG 425
Query: 375 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVND 530
+F+ +L + E+ ++F FG +V + + +GFV D
Sbjct: 426 PDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQA 485
Query: 531 AIKELNGMMVDGQPMKVQL 587
AI +NG + + +KVQL
Sbjct: 486 AITAMNGFQIGMKRLKVQL 504
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 488
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 308
+FI +L + +A+L +F +G +V + + +GFV +N + AI +
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 309 NGELVHGQAIKIEAAKSR 362
NG + + +K++ + R
Sbjct: 491 NGFQIGMKRLKVQLKRPR 508
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +3
Query: 147 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 302
F +++GN +TTE DL F + G V IV R + FV E + A+
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63
Query: 303 NLNGELVHGQAIKIEAAKSR 362
NG +G+A+++ A++R
Sbjct: 64 QFNGVDFNGRALRVNLAQNR 83
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 332
++I N+ + TE L LF++Y ++ V++Y F+H +A++ NG+ + G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 333 AIKIEAAK 356
++ AK
Sbjct: 439 VVEASLAK 446
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/67 (22%), Positives = 38/67 (56%)
Frame = +3
Query: 390 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQ 569
+++ N+ + ++ ELF+++ ++ V++Y F+H + D A++E NG ++G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 570 PMKVQLS 590
++ L+
Sbjct: 439 VVEASLA 445
Score = 35.1 bits (77), Expect = 0.038
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 305
+I++G++ E L PLFEK G + + ++ R Y FV N++ A +
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 306 LNG-ELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 440
+G E+ G+ +K+ S T++F+GN+ E+ E
Sbjct: 261 YDGHEISTGKPLKVNV-------SIANTRLFIGNIPKTKSKDEILE 299
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Frame = +3
Query: 165 NLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGEL 320
NLS TTE DLR +F ++G + +CD+V R +GF++ + A L
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTD 141
Query: 321 VHGQAIKIEAAKSRKAPSTPTTKIFVGN 404
+ G I+++ + +++ S PT ++G+
Sbjct: 142 LDGHKIRVDFSLTKRGHS-PTPGQYMGD 168
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Frame = +3
Query: 378 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDA 533
P+ + V NL+ T ++R++F +FG + +CD+V R +GF++ + D A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 534 IKELNGMMVDGQPMKVQLS 590
+L +DG ++V S
Sbjct: 134 RDKLCNTDLDGHKIRVDFS 152
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Frame = +3
Query: 144 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME--NEQVGREAI 299
T +F+GN+ E ++R +FE++G V E DI Y FV + ++ + +A
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 300 QNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV--VEC 473
+ G +KI KS+ + ++FVG L +++ F +FG V ++
Sbjct: 228 EQDRPIRAGGSRMKIGYGKSQ-----VSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDY 282
Query: 474 DIVRNYGFVHLDATGDVNDAIKELNGMMV 560
D + Y +V + T +A + L G +
Sbjct: 283 DHGQPYAYVVYENTHTSQEACRSLRGACI 311
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Frame = +3
Query: 144 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME--NEQVGREAI 299
T +F+GN+ E ++R +FE++G V E DI Y FV + ++ + +A
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 300 QNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV--VEC 473
+ G +KI KS+ + ++FVG L +++ F +FG V ++
Sbjct: 228 EQDRPIRAGGSRMKIGYGKSQ-----VSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDY 282
Query: 474 DIVRNYGFVHLDATGDVNDAIKELNGMMV 560
D + Y +V + T +A + L G +
Sbjct: 283 DHGQPYAYVVYENTHTSQEACRSLRGACI 311
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Frame = +3
Query: 144 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME--NEQVGREAI 299
T +F+GN+ E ++R +FE++G V E DI Y FV + ++ + +A
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 300 QNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV--VEC 473
+ G +KI KS+ + ++FVG L +++ F +FG V ++
Sbjct: 205 EQDRPIRAGGSRMKIGYGKSQ-----VSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDY 259
Query: 474 DIVRNYGFVHLDATGDVNDAIKELNGMMV 560
D + Y +V + T +A + L G +
Sbjct: 260 DHGQPYAYVVYENTHTSQEACRSLRGACI 288
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVEC--DIVRNYGFVHMENEQVGREAIQNLNGELV 323
++++G S + +R L + E DIV N H V ++ N L
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLLA 69
Query: 324 H--GQAIKIEAAKSRKAPS----TPTTKIFVGNLTDKTRAPEVRELFQKFGT----VVEC 473
G K+ AK P+ + + +FV ++ P+ EL+Q FG VV+C
Sbjct: 70 KFSGLFTKVNFAKKEPKPAENVMSNISNVFVRGISRDM--PDT-ELYQAFGGITDGVVQC 126
Query: 474 DIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKV 581
+ YGFV D + I E++G ++G+ + V
Sbjct: 127 HVADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISV 162
Score = 31.9 bits (69), Expect = 0.35
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGT-VVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 329
+F+ +S + +L F VV+C + YGFV + ++ I ++G+ ++G
Sbjct: 98 VFVRGISRDMPDTELYQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDGKTLNG 157
Query: 330 QAIKIEAAK 356
+ I + A+
Sbjct: 158 KLISVSWAR 166
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +3
Query: 138 TGTFKIFIGNLSDKTTEADLRPLFEKYGTV----VECD----IVRNYGFVHMENEQVGRE 293
+G F +++GN +TTE +L F G + + CD R + F+ E +
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 294 AIQNLNGELVHGQAIKIEAA 353
A++ +NG +G+ +++ A
Sbjct: 62 AVEQMNGAEFNGRPLRVNLA 81
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +3
Query: 390 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKEL 545
++VGN +T E+ F G + IV R + F+ G A++++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 546 NGMMVDGQPMKVQLS 590
NG +G+P++V L+
Sbjct: 67 NGAEFNGRPLRVNLA 81
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 308
I+IG LS +E D+ +F +YG V+ +++R+ + F+ ++++ A+ N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 309 NGELVHGQAIKIEAAKSRKAP 371
NG +H + I+++ + K P
Sbjct: 100 NGISLHKRMIRVDHVEEYKVP 120
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 297 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKT-RAPEVRELFQKFGTVVEC 473
I NL G I + S K P ++F+GN+ ++ ELF+ FG ++
Sbjct: 56 ILNLVGSAAVNSDISYDT--SSKDPHMIRARVFIGNIARAIITRDDIIELFRPFGKIIAV 113
Query: 474 DIV--RNYGFVHLDATGDVNDAIKELNGM 554
+ + +GFV + G +++ + LNGM
Sbjct: 114 NYFAQQGFGFVQFNEAGSADESCRSLNGM 142
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Frame = +3
Query: 351 AKSRKAPS----TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV---------RNY 491
A R++P+ +P ++ + NL+ + E+F +G + D+ R Y
Sbjct: 118 ASPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGY 177
Query: 492 GFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 590
G+V D D +IK ++G +DG + V+++
Sbjct: 178 GYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMT 210
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV---------RNYGFVHMENEQVGREAIQ 302
++ I NLS + L +F YG + D+ R YG+V +N + ++I+
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 303 NLNGELVHGQAIKIEAAKSRKA 368
+++G + G A+ +E R++
Sbjct: 194 HMDGGQIDGMAVHVEMTIGRQS 215
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 39.1 bits (87), Expect = 0.002
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN----EQVGRE 293
K+FIG LS TT+ L F ++G VV+ ++R+ +GFV + E +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 294 AIQNLNGELVHG-QAIKIEAAKSRKAP------STPTTKIFVGNLTDKTRAPE-VRELFQ 449
L G+ V +AI E S P P K+ + +T+ + + +R F+
Sbjct: 110 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 169
Query: 450 KFGTVVECDIV---RNYGFV 500
FGT+ + +I+ R GFV
Sbjct: 170 TFGTLDQVEILGQPRGLGFV 189
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 39.1 bits (87), Expect = 0.002
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN----EQVGRE 293
K+FIG LS TT+ L F ++G VV+ ++R+ +GFV + E +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 294 AIQNLNGELVHG-QAIKIEAAKSRKAP------STPTTKIFVGNLTDKTRAPE-VRELFQ 449
L G+ V +AI E S P P K+ + +T+ + + +R F+
Sbjct: 130 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 189
Query: 450 KFGTVVECDIV---RNYGFV 500
FGT+ + +I+ R GFV
Sbjct: 190 TFGTLDQVEILGQPRGLGFV 209
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 39.1 bits (87), Expect = 0.002
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN----EQVGRE 293
K+FIG LS TT+ L F ++G VV+ ++R+ +GFV + E +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 294 AIQNLNGELVHG-QAIKIEAAKSRKAP------STPTTKIFVGNLTDKTRAPE-VRELFQ 449
L G+ V +AI E S P P K+ + +T+ + + +R F+
Sbjct: 131 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 190
Query: 450 KFGTVVECDIV---RNYGFV 500
FGT+ + +I+ R GFV
Sbjct: 191 TFGTLDQVEILGQPRGLGFV 210
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 308
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 309 NGELVHGQAIKIEAAKS 359
+ L+ + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
Score = 34.7 bits (76), Expect = 0.050
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = +3
Query: 378 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 533
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 534 IKELNGMMVDGQPMKVQLS 590
+++ +++D + + V S
Sbjct: 299 FFKMDNVLIDDRRIHVDFS 317
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 308
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 309 NGELVHGQAIKIEAAKS 359
+ L+ + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
Score = 34.7 bits (76), Expect = 0.050
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = +3
Query: 378 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 533
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 534 IKELNGMMVDGQPMKVQLS 590
+++ +++D + + V S
Sbjct: 299 FFKMDNVLIDDRRIHVDFS 317
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 308
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 309 NGELVHGQAIKIEAAKS 359
+ L+ + I ++ ++S
Sbjct: 234 DNVLIDDRRIHVDFSQS 250
Score = 34.7 bits (76), Expect = 0.050
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = +3
Query: 378 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 533
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
Query: 534 IKELNGMMVDGQPMKVQLS 590
+++ +++D + + V S
Sbjct: 230 FFKMDNVLIDDRRIHVDFS 248
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +3
Query: 351 AKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLD 509
A++ +A P +FVG + +T ++R F+ +G + + +V R Y F+
Sbjct: 93 AENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYS 152
Query: 510 ATGDVNDAIKELNGMMVDGQPMKV 581
+++ A K+ +G+ VDG+ + V
Sbjct: 153 DKAEMHTAYKKADGIKVDGKRLVV 176
Score = 35.1 bits (77), Expect = 0.038
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 311
+F+G ++ +T+E+ LR FE YG + + +V R Y F+ ++ A + +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 312 GELVHGQAIKIEAAKSRKAPSTPTTKIFVG-NLTDKTRAP----EVRELFQKFG 458
G V G+ + ++ + R + ++ G T KTR E RE+ FG
Sbjct: 166 GIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKTREAKSVIEEREIASGFG 219
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/84 (26%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +3
Query: 138 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGRE 293
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++V +
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-D 189
Query: 294 AIQNLNGELVHGQAIKIEAAKSRK 365
+ ++ ++G+ ++ + A+ ++
Sbjct: 190 KVCEIHFHEINGKMVECKKAQPKE 213
Score = 34.7 bits (76), Expect = 0.050
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 488
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = +3
Query: 375 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVND 530
T TKIFVG L T + E F++FG + E ++ R YGFV +
Sbjct: 32 TMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAER 91
Query: 531 AIKELNGMMVDGQPMKVQLS 590
A K+ N ++DG+ V L+
Sbjct: 92 ACKDPN-PIIDGRKANVNLA 110
Score = 35.9 bits (79), Expect = 0.022
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 305
KIF+G L T++ L FE++G + E ++ R YGFV M++ A ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 306 LNGELVHGQAIKIEAAKSRKAPST 377
N ++ G+ + A P T
Sbjct: 96 PN-PIIDGRKANVNLAYLGAKPRT 118
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +3
Query: 147 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 302
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 303 NLNGELVHGQAIKI 344
+N + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +3
Query: 147 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 302
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 303 NLNGELVHGQAIKI 344
+N + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/84 (26%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +3
Query: 138 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGRE 293
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++V +
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-D 189
Query: 294 AIQNLNGELVHGQAIKIEAAKSRK 365
+ ++ ++G+ ++ + A+ ++
Sbjct: 190 KVCEIHFHEINGKMVECKKAQPKE 213
Score = 34.7 bits (76), Expect = 0.050
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 488
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 138 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC 236
TG ++F+GNL ++ E +L+ LF +G + EC
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAEC 145
Score = 35.5 bits (78), Expect = 0.028
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 363 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHL 506
K T ++FVGNL ++ + E++ELF G + EC + + + F+ L
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRL 157
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +3
Query: 147 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 302
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 303 NLNGELVHGQAIK 341
+N + GQ ++
Sbjct: 267 GMNMFDLGGQYLR 279
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 204 LFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 362
+FEK G VV+ +I+ N +GFV M+N A NG + G+ +++ A R
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
Score = 34.3 bits (75), Expect = 0.066
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Frame = +3
Query: 441 LFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 590
+F+K G VV+ +I+ N +GFV + D + A E NG ++G+ ++V L+
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.028
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 308
+++G ++ TE L F +G VV I R +GFV + + AI N+
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 309 NGELVHGQAIKIEAAKSRKA 368
N + G+ I++ A+ KA
Sbjct: 73 NESELFGKTIRVNFARPPKA 92
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 35.1 bits (77), Expect = 0.038
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVECDI--------VRNYGFVHMENEQVGREAIQNL 308
+F+ N+ ++ TE D+ F +YG + + ++ Y V E ++ EAI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 309 NGELVHGQAIKIE 347
N + GQ +K++
Sbjct: 117 NDTDLLGQNVKVD 129
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 35.1 bits (77), Expect = 0.038
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 293
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 545
+IFVG T E+RE F+KF V + +V++ YGF+ + T D + I++L
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 125
Query: 546 NGMMVDGQPMKVQL 587
++ + K+ L
Sbjct: 126 TPKQLEFRSRKLNL 139
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 35.1 bits (77), Expect = 0.038
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 293
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 545
+IFVG T E+RE F+KF V + +V++ YGF+ + T D + I++L
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 126
Query: 546 NGMMVDGQPMKVQL 587
++ + K+ L
Sbjct: 127 TPKQLEFRSRKLNL 140
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein
T23F6.4 protein.
Length = 872
Score = 34.7 bits (76), Expect = 0.050
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 28/142 (19%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEK-YGTVVEC--------------DIVRNYGFVHMENEQVG 287
+F+ NL+ TT+ L LF K YG +V+ + +GFV
Sbjct: 643 LFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTAFDA 702
Query: 288 REAIQNLNGELVHGQAIKIEAAKSRKAPSTPT-------------TKIFVGNLTDKTRAP 428
+ A++++ GEL+ G +++++ + A TK+ V NL +
Sbjct: 703 KTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECTKLLVRNLPFEASVK 762
Query: 429 EVRELFQKFGTVVECDIVRNYG 494
EV LF+ FG V I + G
Sbjct: 763 EVETLFETFGAVKTIRIPKKPG 784
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 144 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 245
T ++F+ NL T E DL+ LF+KYG V E +V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Score = 32.7 bits (71), Expect = 0.20
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Frame = +3
Query: 144 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI-------VRNYGFVHMENEQVGREAIQ 302
T ++ + NL TE LR FEKYG + + + R + FV +E A+
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 303 NLNGELVHGQAIKIEAAK 356
N + + + +E +
Sbjct: 62 KSNQTFFNSKKLTVEECR 79
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +3
Query: 381 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFVHLDATGDVNDAIK 539
TT++ V NL ++R+ F+K+G + + + R + FV G ++A+
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 540 ELNGMMVDGQPMKVQ 584
+ N + + + V+
Sbjct: 62 KSNQTFFNSKKLTVE 76
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 489 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 590
+GFV D A+K++ G ++DG +++++S
Sbjct: 691 FGFVQFYTAFDAKTALKDMQGELLDGHSLELKIS 724
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Frame = +3
Query: 147 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR--------NYGFVHMENEQVGREAIQ 302
F++F G+L ++ ++ L F KY + + +VR YGFV + + A++
Sbjct: 203 FRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMR 262
Query: 303 NLNGELVHGQAIKI 344
++G+ V + IK+
Sbjct: 263 EMDGKYVGNRPIKL 276
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKE 542
++F G+L ++ + + F+K+ + + +VR YGFV + D A++E
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 543 LNGMMVDGQPMKVQLS 590
++G V +P+K++ S
Sbjct: 264 MDGKYVGNRPIKLRKS 279
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.20
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 150 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 248
KI + N+S K T++ L+ F +YG + C + R
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 153 IFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 308
+FI +L ++DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 337 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 396
Query: 309 NGELVHGQAIKIEAAKSRKAP 371
NG + + +K++ R P
Sbjct: 397 NGFQIGSKRLKVQLKVDRGNP 417
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 489 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 587
+GFV + +AI +NG + + +KVQL
Sbjct: 378 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 410
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 31.9 bits (69), Expect = 0.35
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Frame = +3
Query: 261 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 440
+ +E E E IQN + + A + +KA + +F+GN+ + EV E
Sbjct: 22 MEIEAESAILEQIQNKMAKNLESAAYVPPTEEEQKAIDAKS--VFIGNVDFNSTIEEVEE 79
Query: 441 LFQKFGTVVECDI--------VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKV 581
F+ G +V I +N+ ++ D + + +A+ +NG + +P+ V
Sbjct: 80 HFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNGSLFRSRPIVV 133
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 31.1 bits (67), Expect = 0.61
Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Frame = +3
Query: 261 VHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 440
+ +E E + IQN + + A + +KA + +F+GN+ + E+ E
Sbjct: 16 MEIEAESAILQQIQNKMAKHLESAAYVPPTEEEQKAIDAKS--VFIGNVDFNSTIEEIEE 73
Query: 441 LFQKFGTVVECDI--------VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKV 581
F+ G +V+ I +N+ ++ D + + +A+ +NG + +P+ V
Sbjct: 74 HFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNGSLFRSRPIVV 127
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 542
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 543 LNGMMVDGQPMKVQLS 590
LNGM + + + VQL+
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical
protein B0222.2 protein.
Length = 477
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 339 KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATG 518
K++ + RK PS K +V L D+TR + R + + F T ++ GF H
Sbjct: 278 KLQNVQQRKTPSGKIRKFYVWLLPDRTRV-DGRNITKLFST-IQVFTACFAGFAH--GAN 333
Query: 519 DVNDAIKEL 545
DV++AI L
Sbjct: 334 DVSNAIAPL 342
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 542
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 543 LNGMMVDGQPMKVQLS 590
LNGM + + + VQL+
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 542
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 325
Query: 543 LNGMMVDGQPMKVQLS 590
LNGM + + + VQL+
Sbjct: 326 LNGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 387 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKE 542
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 328
Query: 543 LNGMMVDGQPMKVQLS 590
LNGM + + + VQL+
Sbjct: 329 LNGMQLGDKQLVVQLA 344
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 390 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 497
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 390 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 497
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 29.9 bits (64), Expect = 1.4
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +1
Query: 61 LVFIFLTCVIYCYSLYIVTHNLKCR 135
L+F F++C ++ Y++Y+V H + +
Sbjct: 104 LIFFFISCTMFLYAVYLVKHETELK 128
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 390 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 497
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 144
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 390 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 497
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +3
Query: 354 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI-----VRNYGFVHLDATG 518
+ K P +++ NL K E+ E+F KFG V + + R FV +
Sbjct: 9 RGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIF 68
Query: 519 DVNDAIKELNGMMVDGQPMKV 581
D A + L+G V + + V
Sbjct: 69 DAKTACEHLSGYNVSNRYLVV 89
>AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical
protein Y52D5A.1 protein.
Length = 914
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 72 IFNLCYILLFFVHSNP*SKMPGTGTFKI-FIGNL 170
IF+L I +F SN K+P +GTF + +IGN+
Sbjct: 615 IFDLPVIYIFLKMSNSIFKLPASGTFVLMYIGNV 648
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 246 RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 362
+ + +V ENEQ AI LNG + +K+ A+ R
Sbjct: 53 KGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQR 91
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Frame = +3
Query: 372 STP--TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGD 521
STP +T +++ L T +RE+ K+G + + + YGFV ++
Sbjct: 75 STPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQA 134
Query: 522 VNDAIKELNGMMVDGQPMKVQ 584
A+ LN V Q K+Q
Sbjct: 135 AAAAVDGLNTEGVQAQMAKLQ 155
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 327 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 464
GQ + + +K S+P +FVGN++DK +R++ + G V
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNV 73
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 327 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 464
GQ + + +K S+P +FVGN++DK +R++ + G V
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNV 73
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +3
Query: 372 STPT-TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDV 524
+TP+ T +++ L T +RE+ K+G + + + YGFV ++
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 161
Query: 525 NDAIKELNGMMVDGQPMKVQ 584
A+ LN V Q K+Q
Sbjct: 162 AAAVDGLNTEGVQAQMAKLQ 181
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 342 IEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 464
++ + +R + + +FVGN+ VR +F FGT+
Sbjct: 129 LQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTI 169
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -1
Query: 589 DNCTFMGCPSTIIPF------NSLIASFTSPVASKCTKP*LRTISHSTTVPNF*NS 440
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -1
Query: 589 DNCTFMGCPSTIIPF------NSLIASFTSPVASKCTKP*LRTISHSTTVPNF*NS 440
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
>L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 2 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 30 VYCVGNSWSLFGVHIFNLCYILLFFV 107
V+C +SLFGVH + ++LFFV
Sbjct: 638 VWCSIGMFSLFGVHATDNAIVVLFFV 663
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -1
Query: 589 DNCTFMGCPSTIIPF------NSLIASFTSPVASKCTKP*LRTISHSTTVPNF*NS 440
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,667,998
Number of Sequences: 27780
Number of extensions: 258644
Number of successful extensions: 1101
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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