Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12j19f
(325 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.06 |rpp201|rpp2, rpp2-1|60S acidic ribosomal protein P2A... 97 6e-22
SPBC23G7.15c |rpp202|rpp2-2|60S acidic ribosomal protein P2B sub... 96 1e-21
SPAC1071.08 |rpp203|rpp2-3, rla6|60S acidic ribosomal protein P2... 93 1e-20
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.13
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 28 0.40
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 0.53
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 27 0.93
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 26 1.2
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 26 1.2
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 26 1.6
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 2.1
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 2.1
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 25 2.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 3.7
SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch... 24 4.9
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 24 4.9
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 24 4.9
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 24 6.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 24 6.5
SPAC3A11.11c |||pyridoxal reductase |Schizosaccharomyces pombe|c... 24 6.5
SPBC115.03 ||SPBC839.18c|gfo/idh/mocA family oxidoreductase |Sch... 24 6.5
SPBC211.08c |||ribonuclease PH-like|Schizosaccharomyces pombe|ch... 23 8.6
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ... 23 8.6
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 23 8.6
>SPBP8B7.06 |rpp201|rpp2, rpp2-1|60S acidic ribosomal protein P2A
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 110
Score = 97.1 bits (231), Expect = 6e-22
Identities = 40/69 (57%), Positives = 61/69 (88%)
Frame = +1
Query: 55 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 234
M+Y+AAYLL +GGK +P+A+D+E +LS+VGIEA++E+++ +I ELNGKD+++LIAAG E
Sbjct: 1 MKYLAAYLLLTVGGKDSPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNE 60
Query: 235 KLSSMPVGG 261
KL+++P GG
Sbjct: 61 KLATVPTGG 69
>SPBC23G7.15c |rpp202|rpp2-2|60S acidic ribosomal protein P2B
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 110
Score = 95.9 bits (228), Expect = 1e-21
Identities = 41/69 (59%), Positives = 61/69 (88%)
Frame = +1
Query: 55 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 234
M+Y+AAYLL +GGK +P+A+D+E +LS+VGIEA+AE+++ +I+ELNGK++E+LIAAG E
Sbjct: 1 MKYLAAYLLLTVGGKQSPSASDIESVLSTVGIEAEAERVESLISELNGKNIEELIAAGNE 60
Query: 235 KLSSMPVGG 261
KLS++P G
Sbjct: 61 KLSTVPSAG 69
>SPAC1071.08 |rpp203|rpp2-3, rla6|60S acidic ribosomal protein P2C
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 110
Score = 92.7 bits (220), Expect = 1e-20
Identities = 38/69 (55%), Positives = 61/69 (88%)
Frame = +1
Query: 55 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 234
M+Y+AAYLL +GGK +P+A+D+E +LS+VGIE+++E+++ +I EL+GKD+++LIAAG E
Sbjct: 1 MKYLAAYLLLTVGGKNSPSASDIESVLSTVGIESESERVEALIKELDGKDIDELIAAGNE 60
Query: 235 KLSSMPVGG 261
KL+++P GG
Sbjct: 61 KLATVPSGG 69
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 29.5 bits (63), Expect = 0.13
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = -3
Query: 191 SSVITFLSFSASASIP--TELRIFSTSAAAGVVLPPSTASKYAAT 63
SSV T LS SAS+SIP + STS ++ V+P S++S +++
Sbjct: 8 SSVDTSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSS 52
Score = 27.1 bits (57), Expect = 0.70
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -3
Query: 239 SFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYA 69
SF+ PA+ S TSL SS S SAS + + + S+S+A+ P S++S +A
Sbjct: 70 SFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSAS----PTSSSSSHA 122
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 27.9 bits (59), Expect = 0.40
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 206 TSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKY 72
+ L + S T +S S+ S+PT+ + T + + V PPS S Y
Sbjct: 526 SKLSVESDETAVSASSGESVPTDSTLTDTKSKSVFVHPPSPQSLY 570
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.5 bits (58), Expect = 0.53
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = -3
Query: 239 SFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTA 81
SF P+A + S P+SS+ +F + SA+++ P+ + S A P +T+
Sbjct: 451 SFKAPSATTDKPSPPVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTTTPSATS 503
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 26.6 bits (56), Expect = 0.93
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -3
Query: 221 AISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 78
++S S+ L S++ T S +AS+PT I S S P+T+S
Sbjct: 79 SLSSSSILSNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVPTTSS 126
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 26.2 bits (55), Expect = 1.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 121 VEKILSSVGIEADAEKLKKVITELNG 198
V++I VG+E D+E K + E+ G
Sbjct: 1742 VDEIFGEVGVEKDSEDYKSNVKEIKG 1767
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 1.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -3
Query: 206 TSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT 63
T LP ++V T SFS SAS T +++ +V PPST+ T
Sbjct: 37 TPLPSANVTT-TSFS-SASTETSTHSVTSTNITSIVPPPSTSHNSTTT 82
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 25.8 bits (54), Expect = 1.6
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +2
Query: 50 KKCVTWPRIYWLCWV 94
+K +W RI+W+C++
Sbjct: 299 EKAESWKRIFWMCYI 313
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 2.1
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -3
Query: 257 PTGIDDSFSRPAAISCSTSLPLSS---VITFLSFSASASIPTELRIFSTSAAAGVVLPPS 87
PT S+ +++ S+S P SS +T S S S+ T STS++ S
Sbjct: 202 PTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSS 261
Query: 86 TASKYAAT 63
TAS +++
Sbjct: 262 TASSSSSS 269
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 2.1
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -3
Query: 263 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLS----FSASASIPTELRIFSTSAAAGVVL 96
PPP SFS I+ ++ +P SS T + ++ S+ +P+ + I S S ++ VL
Sbjct: 190 PPPASSTSSFS---TITNTSMIPSSSSFTTTTGSPYYNTSSFLPSSV-ISSASLSSSSVL 245
Query: 95 PPS 87
P S
Sbjct: 246 PTS 248
Score = 24.2 bits (50), Expect = 4.9
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -3
Query: 209 STSLPLSSVITFLSFSASASIPTELRIFSTSAAAGV 102
S+ LP SSVI+ S S+S+ +PT + I STS V
Sbjct: 226 SSFLP-SSVISSASLSSSSVLPTSI-ITSTSTPVTV 259
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 25.0 bits (52), Expect = 2.8
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -3
Query: 233 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 78
S P+A+S +TS+P S+ + +S S S S T L S+S + V+ +T S
Sbjct: 139 SSPSAVSSTTSIP--SISSTISSSVSTSSFTSL---SSSGFSTVLSSTNTTS 185
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 24.6 bits (51), Expect = 3.7
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Frame = -3
Query: 260 PPTGIDDSFSRPAA------ISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVV 99
PPTG S S P + STS+P+ T + + S+ +PT STS
Sbjct: 179 PPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTT----STSCTTSTS 234
Query: 98 LPPSTAS 78
+P +S
Sbjct: 235 IPTGGSS 241
Score = 24.6 bits (51), Expect = 3.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -3
Query: 227 PAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT 63
P + STS+P+ T + + S+ +PT STS +PP+ S T
Sbjct: 252 PPTSTSSTSIPIPPTSTSSTDTNSSPLPTT----STSCTTSTSIPPTGNSTTPVT 302
Score = 23.4 bits (48), Expect = 8.6
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -3
Query: 215 SCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT 63
S ST + S + S S + S + L STS +PP+ S +T
Sbjct: 82 SASTPIITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSSSLST 132
>SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 469
Score = 24.2 bits (50), Expect = 4.9
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 44 GLKKCVTWPRIYWLCW-VARPRQLPLTLRRSS 136
GLKK + P I+W W V R ++ LR S
Sbjct: 418 GLKKNIKTPVIHWKDWKVIRNAEIERGLRHES 449
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 24.2 bits (50), Expect = 4.9
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 50 KKCVTWPRIYWLCWVARPRQLPLTLRRSSAPS 145
KK + + +I W WV R +P S PS
Sbjct: 161 KKGIQFEKIGWGRWVLRDSTIPANSHPQSLPS 192
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 24.2 bits (50), Expect = 4.9
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = -3
Query: 188 SVITFLSFSASA---SIPTELRIFSTSAAAGVVLPPSTAS 78
S++ LSFS++ S+P++L+ F+ +++ + P TAS
Sbjct: 124 SLLALLSFSSNHRLHSMPSQLQPFNNASSYTTPMAPFTAS 163
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 23.8 bits (49), Expect = 6.5
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = -3
Query: 260 PPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTA 81
P ++ + + S ++ SSV S +AS+++P + S + + PST
Sbjct: 209 PAVSSSETLTSVSITSTESAYTSSSVDIAASTTASSTLPVSTSEATVSFSTDIPATPSTL 268
Query: 80 SKYAAT 63
S A++
Sbjct: 269 SSPASS 274
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 23.8 bits (49), Expect = 6.5
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = -3
Query: 239 SFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT 63
S + + ++S PLSSV + + SAS++ T + ST+A + P ++ + +AT
Sbjct: 328 SSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVN--STTATSASSTPLTSVNSTSAT 384
Score = 23.4 bits (48), Expect = 8.6
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 215 SCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPP-STASKYAAT 63
S +S PLSS + + SAS++ T + +T++A+ L S+A+ AT
Sbjct: 285 STPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTAT 336
Score = 23.4 bits (48), Expect = 8.6
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -3
Query: 209 STSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT 63
++S PL+SV + + SAS++ T + STSA + P ++A+ +T
Sbjct: 354 ASSTPLTSVNSTTATSASSTPLTSVN--STSATSASSTPLTSANSTTST 400
Score = 23.4 bits (48), Expect = 8.6
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -3
Query: 209 STSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT 63
++S PLSSV + + SAS++ T + ST+A + P ++ + +AT
Sbjct: 452 ASSTPLSSVNSTTATSASSTPLTSVN--STTATSASSTPLTSVNSTSAT 498
Score = 23.4 bits (48), Expect = 8.6
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -3
Query: 209 STSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT 63
++S PL+SV + + SAS++ T + STSA + P ++A+ +T
Sbjct: 468 ASSTPLTSVNSTTATSASSTPLTSVN--STSATSASSTPLTSANSTTST 514
>SPAC3A11.11c |||pyridoxal reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 334
Score = 23.8 bits (49), Expect = 6.5
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -3
Query: 230 RPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKY 72
+P + + S++LP + L+ S+ F SA G +LP +A+ Y
Sbjct: 232 QPPSSTFSSTLPCIQALKELASKYDMSLAELALSFILSAGRGRILPIPSATSY 284
>SPBC115.03 ||SPBC839.18c|gfo/idh/mocA family oxidoreductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 368
Score = 23.8 bits (49), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 5 NVILSALHVSCQLGLKKCVTWPR 73
NVILS+ +VSC ++ C+ R
Sbjct: 235 NVILSSTNVSCGCEMRFCIKGTR 257
>SPBC211.08c |||ribonuclease PH-like|Schizosaccharomyces pombe|chr
2|||Manual
Length = 257
Score = 23.4 bits (48), Expect = 8.6
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -3
Query: 233 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRI--FSTSAAAGVV 99
S I+C+ S P S TF +F +SA + E R+ FSTS G V
Sbjct: 56 SEKIKIACTVSGPRPSK-TF-AFRSSAKLNCEFRLSPFSTSVRQGHV 100
>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 23.4 bits (48), Expect = 8.6
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 242 DSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSA 114
D+ +RPA T+ SS T +S S S E TSA
Sbjct: 185 DTSTRPANSQTPTTTRASSYTTLVSTSNQVSNEAEASAVETSA 227
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 23.4 bits (48), Expect = 8.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 257 PTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIP 144
PT S AI+ S + PL V T L S+SIP
Sbjct: 204 PTSHIISGGLSGAIASSLTTPLDVVKTLLQTRGSSSIP 241
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,027,636
Number of Sequences: 5004
Number of extensions: 16028
Number of successful extensions: 91
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 87815546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -