Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12j14r
         (363 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113572-1|AAM29577.1|   90|Drosophila melanogaster RH19679p pro...    63   9e-11
AE014296-2905|AAF49346.2|   90|Drosophila melanogaster CG7630-PA...    63   9e-11
AY089218-1|AAL89956.1|  305|Drosophila melanogaster AT01821p pro...    31   0.34 
AF045470-1|AAF18568.1|  305|Drosophila melanogaster Gom protein.       31   0.34 
AE013599-3345|AAF46808.2|  305|Drosophila melanogaster CG6727-PA...    31   0.34 
AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p pro...    30   0.79 
AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-P...    30   0.79 
AY113238-1|AAM29243.1| 1566|Drosophila melanogaster AT11515p pro...    27   9.7  
AE014134-2480|AAF53382.2| 1566|Drosophila melanogaster CG15287-P...    27   9.7  

>AY113572-1|AAM29577.1|   90|Drosophila melanogaster RH19679p
           protein.
          Length = 90

 Score = 63.3 bits (147), Expect = 9e-11
 Identities = 28/68 (41%), Positives = 38/68 (55%)
 Frame = -3

Query: 238 YHGESHFKPPTMDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXAKTSGLVYLN 59
           YHG  H    TM++LPVP G W+  H     ++NA L+ GI          K+SG+++ N
Sbjct: 24  YHG-GHGPHSTMNDLPVPAGDWKEQHSQKNAKYNAALITGILVLAGTIGFVKSSGIIHFN 82

Query: 58  YSPPKSLD 35
           Y  PKSLD
Sbjct: 83  YYAPKSLD 90


>AE014296-2905|AAF49346.2|   90|Drosophila melanogaster CG7630-PA
           protein.
          Length = 90

 Score = 63.3 bits (147), Expect = 9e-11
 Identities = 28/68 (41%), Positives = 38/68 (55%)
 Frame = -3

Query: 238 YHGESHFKPPTMDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXAKTSGLVYLN 59
           YHG  H    TM++LPVP G W+  H     ++NA L+ GI          K+SG+++ N
Sbjct: 24  YHG-GHGPHSTMNDLPVPAGDWKEQHSQKNAKYNAALITGILVLAGTIGFVKSSGIIHFN 82

Query: 58  YSPPKSLD 35
           Y  PKSLD
Sbjct: 83  YYAPKSLD 90


>AY089218-1|AAL89956.1|  305|Drosophila melanogaster AT01821p
           protein.
          Length = 305

 Score = 31.5 bits (68), Expect = 0.34
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = -3

Query: 205 MDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXAKTSGLVYLNYSPPK 44
           + + P P+G +     A   R+N +L+ GI         A +SG++ LN++ P+
Sbjct: 83  LSDCPKPEGDFMKAWSAKNSRYNLILVSGILAAGGTLGFALSSGVLCLNWTIPE 136


>AF045470-1|AAF18568.1|  305|Drosophila melanogaster Gom protein.
          Length = 305

 Score = 31.5 bits (68), Expect = 0.34
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = -3

Query: 205 MDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXAKTSGLVYLNYSPPK 44
           + + P P+G +     A   R+N +L+ GI         A +SG++ LN++ P+
Sbjct: 83  LSDCPKPEGDFMKAWSAKNSRYNLILVSGILAAGGTLGFALSSGVLCLNWTIPE 136


>AE013599-3345|AAF46808.2|  305|Drosophila melanogaster CG6727-PA
           protein.
          Length = 305

 Score = 31.5 bits (68), Expect = 0.34
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = -3

Query: 205 MDELPVPKGSWQSHHDANQRRFNAVLLFGIXXXXXXXXXAKTSGLVYLNYSPPK 44
           + + P P+G +     A   R+N +L+ GI         A +SG++ LN++ P+
Sbjct: 83  LSDCPKPEGDFMKAWSAKNSRYNLILVSGILAAGGTLGFALSSGVLCLNWTIPE 136


>AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 0.79
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -2

Query: 122  WNCIHCCYIRRCKNIR-TGLPQLLA-SQVPG 36
            W+C  CC+  RC   +  GLPQ+ A SQ  G
Sbjct: 1625 WSCERCCFCMRCGATKPEGLPQVAALSQASG 1655


>AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-PA
            protein.
          Length = 2006

 Score = 30.3 bits (65), Expect = 0.79
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -2

Query: 122  WNCIHCCYIRRCKNIR-TGLPQLLA-SQVPG 36
            W+C  CC+  RC   +  GLPQ+ A SQ  G
Sbjct: 1788 WSCERCCFCMRCGATKPEGLPQVAALSQASG 1818


>AY113238-1|AAM29243.1| 1566|Drosophila melanogaster AT11515p protein.
          Length = 1566

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 190  VPKGSWQSHHDANQRR 143
            + K SW++HH+ N+RR
Sbjct: 1464 ISKRSWKNHHEENRRR 1479


>AE014134-2480|AAF53382.2| 1566|Drosophila melanogaster CG15287-PA
            protein.
          Length = 1566

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 190  VPKGSWQSHHDANQRR 143
            + K SW++HH+ N+RR
Sbjct: 1464 ISKRSWKNHHEENRRR 1479


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,690,870
Number of Sequences: 53049
Number of extensions: 318027
Number of successful extensions: 999
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)