Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12j02r
         (785 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    31   6.2  
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.             31   6.2  
Z92546-1|CAB62953.1|  822|Homo sapiens bK65A6.2 (novel Sushi dom...    30   8.2  
BC033107-1|AAH33107.1|  822|Homo sapiens sushi domain containing...    30   8.2  

>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
 Frame = -2

Query: 349  ELTTLRSVVSLLEMVAFGNTAASTIDPVF-----------ITRGDMEVRWRHSTKNSIS* 203
            +L T +    +      GNT+ ST  P F           +T G  E+     T ++   
Sbjct: 8668 DLVTTKPTSPMATTSTLGNTSVSTSTPAFPETMMTQPTSSLTSGLREISTSQETSSATER 8727

Query: 202  ST*LSEAPMVSSLMVSRTLFLSLGGT 125
            S  LS  P  ++  VSRT  LSLG T
Sbjct: 8728 SASLSGMPTGATTKVSRTEALSLGRT 8753


>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
          Length = 6995

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
 Frame = -2

Query: 349 ELTTLRSVVSLLEMVAFGNTAASTIDPVF-----------ITRGDMEVRWRHSTKNSIS* 203
           +L T +    +      GNT+ ST  P F           +T G  E+     T ++   
Sbjct: 372 DLVTTKPTSPMATTSTLGNTSVSTSTPAFPETMMTQPTSSLTSGLREISTSQETSSATER 431

Query: 202 ST*LSEAPMVSSLMVSRTLFLSLGGT 125
           S  LS  P  ++  VSRT  LSLG T
Sbjct: 432 SASLSGMPTGATTKVSRTEALSLGRT 457


>Z92546-1|CAB62953.1|  822|Homo sapiens bK65A6.2 (novel Sushi domain
           (SCR repeat) containing protein similar to Mucins)
           protein.
          Length = 822

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 17/67 (25%), Positives = 31/67 (46%)
 Frame = +3

Query: 159 TIREETIGASDS*VDYEIEFLVEWRHLTSISPRVMNTGSIVEAAVFPKATISRSDTTDLR 338
           TI  E  G  ++ + Y  E+  +W +L  ++  + N+GS          +  R     LR
Sbjct: 191 TITIELWGYEETGMPYSQEWTAKWSYLYPLATHIPNSGSFTFTPKPAPPSYQRWRVGALR 250

Query: 339 VVNSKAY 359
           +++SK Y
Sbjct: 251 IIDSKNY 257


>BC033107-1|AAH33107.1|  822|Homo sapiens sushi domain containing 2
           protein.
          Length = 822

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 17/67 (25%), Positives = 31/67 (46%)
 Frame = +3

Query: 159 TIREETIGASDS*VDYEIEFLVEWRHLTSISPRVMNTGSIVEAAVFPKATISRSDTTDLR 338
           TI  E  G  ++ + Y  E+  +W +L  ++  + N+GS          +  R     LR
Sbjct: 191 TITIELWGYEETGMPYSQEWTAKWSYLYPLATHIPNSGSFTFTPKPAPPSYQRWRVGALR 250

Query: 339 VVNSKAY 359
           +++SK Y
Sbjct: 251 IIDSKNY 257


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,724,351
Number of Sequences: 237096
Number of extensions: 3542158
Number of successful extensions: 6735
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6729
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)